Jason Tsong-Li Wang - researchr alias

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2008

Detecting conserved secondary structures in RNA molecules using constrained structural alignmentMugdha Khaladkar, Vandanaben Patel, Vivian Bellofatto, Jeffrey Wilusz, Jason Tsong-Li Wang. CANDC, 32(4):264-272, 2008. [doi]

Proceedings of the ACM SIGMOD International Conference on Management of Data, SIGMOD 2008, Vancouver, BC, Canada, June 10-12, 2008Jason Tsong-Li Wang, editor, ACM, 2008.

Discovering Frequent Agreement Subtrees from Phylogenetic DataSen Zhang, Jason Tsong-Li Wang. tkde, 20(1):68-82, 2008. [doi]

2007

2006

A New Kernel Method for RNA ClassificationXiaoming Wu, Jason Tsong-Li Wang, Katherine G. Herbert. bibe 2006: 201-208

Mining Frequent Agreement Subtrees in Phylogenetic DatabasesSen Zhang, Jason Tsong-Li Wang. sdm 2006: [doi]

2005

Lineage Path Integration for Phylogenetic ResourcesKatherine G. Herbert, Shashikanth Pusapati, Jason Tsong-Li Wang, William H. Piel. ssdbm 2005: 117-120

A method for aligning RNA secondary structures and its application to RNA motif detectionJianghui Liu, Jason Tsong-Li Wang, Jun Hu, Bin Tian. bmcbi, 6:89, 2005. [doi]

MetricMap: an embedding technique for processing distance-based queries in metric spacesJason Tsong-Li Wang, Xiong Wang, Dennis Shasha, Kaizhong Zhang. tsmc, 35(5):973-987, 2005. [doi]

Data Mining in BioinformaticsJason Tsong-Li Wang, Mohammed Javeed Zaki, Hannu Toivonen, Dennis Shasha, editors, Springer, 2005.

Introduction to Data Mining in BioinformaticsJason Tsong-Li Wang, Mohammed Javeed Zaki, Hannu Toivonen, Dennis Shasha. In Jason Tsong-Li Wang, Mohammed Javeed Zaki, Hannu Toivonen, Dennis Shasha, editors, Data Mining in Bioinformatics. pages 3-8, Springer, 2005.

2004

2003

Computational Biology and Genome InformaticsJason Tsong-Li Wang, Cathy H. Wu, Paul P. Wang, editors, World Scientific, 2003.

TreeRank: A Similarity Measure for Nearest Neighbor Searching in Phylogenetic DatabasesJason Tsong-Li Wang, Huiyuan Shan, Dennis Shasha, William H. Piel. ssdbm 2003: 171 [doi]

Protein Classification: A Geometric Hashing ApproachXiong Wang, Jason Tsong-Li Wang. In Computational Biology and Genome Informatics. pages 163-181, 2003.

Proceedings of the 3nd ACM SIGKDD Workshop on Data Mining in Bioinformatics (BIOKDD 2003), August 27th, 2003, Washington, DC, USAMohammed Javeed Zaki, Jason Tsong-Li Wang, Hannu Toivonen, editors, 2003.

Opening RemarksMohammed Javeed Zaki, Jason Tsong-Li Wang, Hannu Toivonen. kdd 2003: [doi]

Special issue on data management in bioinformaticsMohammed Javeed Zaki, Jason Tsong-Li Wang. is, 28(4):241-242, 2003. [doi]

Data mining in bioinformatics: report on BIOKDD 03Mohammed Javeed Zaki, Jason Tsong-Li Wang, Hannu Toivonen. sigkdd, 5(2):198-199, 2003. [doi]

2002

A Structure-Based Search Engine for Phylogenetic DatabasesHuiyuan Shan, Katherine G. Herbert, William H. Piel, Dennis Shasha, Jason Tsong-Li Wang. ssdbm 2002: 7-10 [doi]

ATreeGrep: Approximate Searching in Unordered TreesDennis Shasha, Jason Tsong-Li Wang, Huiyuan Shan, Kaizhong Zhang. ssdbm 2002: 89-98 [doi]

Algorithmics and Applications of Tree and Graph SearchingDennis Shasha, Jason Tsong-Li Wang, Rosalba Giugno. pods 2002: 39-52 [doi]

Finding approximate patterns in undirected acyclic graphsJason Tsong-Li Wang, Kaizhong Zhang, George Jyh-Shian Chang, Dennis Shasha. PR, 35(2):473-483, 2002. [doi]

Finding Patterns in Three-Dimensional Graphs: Algorithms and Applications to Scientific Data MiningXiong Wang, Jason Tsong-Li Wang, Dennis Shasha, Bruce A. Shapiro, Isidore Rigoutsos, Kaizhong Zhang. tkde, 14(4):731-749, 2002. [doi]

Mining Genes in DNA Using GeneScoutMichael M. Yin, Jason Tsong-Li Wang. icdm 2002: 733-736 [doi]

Proceedings of the 2nd ACM SIGKDD Workshop on Data Mining in Bioinformatics (BIOKDD 2002), July 23rd, 2002, Edmonton, Alberta, CanadaMohammed Javeed Zaki, Jason Tsong-Li Wang, Hannu Toivonen, editors, 2002.

ForewordMohammed Javeed Zaki, Jason Tsong-Li Wang, Hannu Toivonen. kdd 2002: [doi]

BIOKDD 2002: Recent Advanced in Data Minig for BioinformaticsMohammed Javeed Zaki, Jason Tsong-Li Wang, Hannu Toivonen. sigkdd, 4(2):112-114, 2002. [doi]

BIOKDD01: Workshop on Data Mining in BioinformaticsMohammed Javeed Zaki, Jason Tsong-Li Wang, Hannu Toivonen. sigkdd, 3(2):71-73, 2002. [doi]

Clustering and Classifying Enzymes in Metabolic Pathways: Some Preliminary ResultsSen Zhang, Li Liao, Jean-Francois Tomb, Jason Tsong-Li Wang. kdd 2002: 19-24 [doi]

XML Query by ExampleSen Zhang, Jason Tsong-Li Wang, Katherine G. Herbert. ijcia, 2(3):329-337, 2002. [doi]

2001

Precise Environmental Searches: Integrating Hierarchical Information Search with EnviroDaemonGeorge Jyh-Shian Chang, Gunjan Samtani, Marcus L. Healey, Franz J. Kurfess, Jason Tsong-Li Wang. jsi, 10(3):253-267, 2001.

Mining the World Wide Web: An Information Search ApproachGeorge Jyh-Shian Chang, Marcus J. Healey, James A. M. McHugh, Jason Tsong-Li Wang. Kluwer, 2001.

Bioinformatics - Introduction to the Special IssueJames R. Gattiker, Jason Tsong-Li Wang, Paul P. Wang. isci, 139(1-2):1-2, 2001.

DNA sequence classification via an expectation maximization algorithm and neural networks: a case studyQicheng Ma, Jason Tsong-Li Wang, Dennis Shasha, Cathy H. Wu. tsmc, 31(4):468-475, 2001.

Finding similar consensus between trees: an algorithm and a distance hierarchyJason Tsong-Li Wang, Kaizhong Zhang. PR, 34(1):127-137, 2001. [doi]

New techniques for extracting features from protein sequencesJason Tsong-Li Wang, Qicheng Ma, Dennis Shasha, Cathy H. Wu. IBMSJ, 40(2):426-441, 2001. [doi]

Effective hidden Markov models for detecting splicing junction sites in DNA sequencesMichael M. Yin, Jason Tsong-Li Wang. isci, 139(1-2):139-163, 2001.

Proceedings of the ACM SIGKDD Workshop on Data Mining in Bioinformatics (BIOKDD 2001)Mohammed Javeed Zaki, Hannu Toivonen, Jason Tsong-Li Wang, editors, 2001.

2000

1999

Biocomputing - Introduction to the Special IssueJames R. Gattiker, Jason Tsong-Li Wang. ijait, 8(4):361-362, 1999.

A Framework for Biological Pattern Discovery on Networks of WorkstationsBin Li, Dennis Shasha, Jason Tsong-Li Wang. In Pattern Discovery in Biomolecular Data. pages 133-144, 1999.

Application of Bayesian Neural Networks to Protein Sequence ClassificationQicheng Ma, Jason Tsong-Li Wang. icai 1999: 530-536

Biological Data Mining Using Bayesian Neural Networks: A Case StudyQicheng Ma, Jason Tsong-Li Wang. ijait, 8(4):433-452, 1999.

Pattern Discovery and Classification in BiosequencesJason Tsong-Li Wang, Thomas G. Marr, Steve Rozen, Dennis Shasha. In Pattern Discovery in Biomolecular Data. pages 55-74, 1999.

New Techniques for DNA Sequence ClassificationJason Tsong-Li Wang, Steve Rozen, Bruce A. Shapiro, Dennis Shasha, Zhiyuan Wang, Maisheng Yin. jcb, 6(2):209-218, 1999.

Identifying Approximately Common Substructures in Trees Based on a Restricted Edit DistanceJason Tsong-Li Wang, Kaizhong Zhang, Chia-Yo Chang. isci, 121(3-4):367-386, 1999.

Pattern Discovery in Biomolecular Data: Tools, Techniques and ApplicationsJason Tsong-Li Wang, Bruce A. Shapiro, Dennis Shasha, editors, Oxford University Press, 1999.

Evaluating a Class of Distance-Mapping Algorithms for Data Mining and ClusteringJason Tsong-Li Wang, Xiong Wang, King-Ip Lin, Dennis Shasha, Bruce A. Shapiro, Kaizhong Zhang. kdd 1999: 307-311 [doi]

1998

1997

Electronic enterprise engineering: an outline of an architectureMichael Bieber, Michael R. Bartolacci, Jerry Fjermestad, Franz J. Kurfess, Qianhong Liu, Marvin K. Nakayama, Ajaz Rana, Wilhelm Rossak, Richard B. Scherl, Murat M. Tanik, Jason Tsong-Li Wang, Raymond T. Yeh, Peter A. Ng, Richard Sweeney, Fabio Vitali. ECBS 1997: 376 [doi]

A graphical environment for change detection in structured documentsGeorge Jyh-Shian Chang, Girish Patel, Liam Relihan, Jason Tsong-Li Wang. compsac 1997: 536-541 [doi]

Scientific Data Classification: A Case StudyGung-Wei Chirn, Jason Tsong-Li Wang, Zhiyuan Wang. ictai 1997: 216 [doi]

Fast retrieval of electronic messages that contain mistyped words or spelling errorsJason Tsong-Li Wang, Chia-Yo Chang. tsmc, 27(3):441-451, 1997.

Automated Discovery of Active Motifs in Three Dimensional MoleculesXiong Wang, Jason Tsong-Li Wang, Dennis Shasha, Bruce A. Shapiro, Sitaram Dikshitulu, Isidore Rigoutsos, Kaizhong Zhang. kdd 1997: 89-95

Structural Matching and Discovery in Document DatabasesJason Tsong-Li Wang, Dennis Shasha, George Jyh-Shian Chang, Liam Relihan, Kaizhong Zhang, Girish Patel. sigmod 1997: 560-563 [doi]

Knowledge Discovering for Document Classification Using Tree Matching in TEXPROSChing-Song Wei, Qianhong Liu, Jason Tsong-Li Wang, Peter A. Ng. isci, 100(1-4):255-310, 1997.

1996

A Visualization Tool for Pattern Matching and Discovery in Scientific DatabasesGeorge Jyh-Shian Chang, Jason Tsong-Li Wang, Gung-Wei Chirn, Chia-Yo Chang, Weihong Wu, Firas Aljallad. seke 1996: 563-570

Scientific Data Mining: A Case StudyChia-Yo Chang, Jason Tsong-Li Wang. seke 1996: 100-107

Information Extraction from the Structured Part of Office DocumentsXiaolong Hao, Jason Tsong-Li Wang, Peter A. Ng. isci, 91(3):245-274, 1996.

Automated Discovery of Active Motifs in Multiple RNA Secondary StructuresJason Tsong-Li Wang, Bruce A. Shapiro, Dennis Shasha, Kaizhong Zhang, Chia-Yo Chang. kdd 1996: 70-75

On the Editing Distance Between Undirected Acyclic GraphsKaizhong Zhang, Jason Tsong-Li Wang, Dennis Shasha. ijfcs, 7(1):43-58, 1996.

Curriculum Knowledge Representation and Manipulation in Knowledge-Based Tutoring SystemsGang Zhou, Jason Tsong-Li Wang, Peter A. Ng. tkde, 8(5):679-689, 1996. [doi]

1995

A New Approach to Modeling Personal Office DocumentsFortune S. Mhlanga, Zhijian Zhu, Jason Tsong-Li Wang, Peter A. Ng. DKE, 17(2):127-158, 1995. [doi]

LHM: a logic-based hypertext data model for integrating hypertext and information systemsJiangling Wan, Michael P. Bieber, Jason Tsong-Li Wang, Peter A. Ng. hicss 1995: 350 [doi]

Pattern Matching and Pattern Discovery in Scientific, Program, and Document DatabasesJason Tsong-Li Wang, Kaizhong Zhang, Dennis Shasha. sigmod 1995: 487 [doi]

An Integrated Toolkit for Pattern Matching and Pattern Discovery in Scientific, Program, and Document databasesJason Tsong-Li Wang, Gung-Wei Chim, Chia-Yo Chang, George Jyh-Shian Chang, Karen Pysniak. seke 1995: 497

Algorithms for Approximate Graph MatchingJason Tsong-Li Wang, Kaizhong Zhang, Gung-Wei Chirn. isci, 82(1-2):45-74, 1995.

On the Editing Distance between Undirected Acyclic Graphs and Related ProblemsKaizhong Zhang, Jason Tsong-Li Wang, Dennis Shasha. cpm 1995: 395-407

1994

DocFlow: an event-driven visual programming environment for office automation through document processingSteve C. Y. Chiang, Jason Tsong-Li Wang, Michael P. Bieber, Peter A. Ng. seke 1994: 454-461

Exact and approximate algorithms for unordered tree matchingDennis Shasha, Jason Tsong-Li Wang, Kaizhong Zhang, Frank Y. Shih. tsmc, 24(4):668-678, 1994.

Document Management Through Hypertext: A Logic Modeling ApproachJiangling Wan, Michael P. Bieber, Jason Tsong-Li Wang, Peter A. Ng. hicss 1994: 558-568

A System for Approximate Tree MatchingJason Tsong-Li Wang, Kaizhong Zhang, Karpjoo Jeong, Dennis Shasha. tkde, 6(4):559-571, 1994. [doi]

Approximate Graph Matching Using Probabilistic Hill Climbing AlgorithmsJason Tsong-Li Wang, Kaizhong Zhang, Gung-Wei Chirn. ictai 1994: 390-396

Combinatorial Pattern Discovery for Scientific Data: Some Preliminary ResultsJason Tsong-Li Wang, Gung-Wei Chirn, Thomas G. Marr, Bruce A. Shapiro, Dennis Shasha, Kaizhong Zhang. sigmod 1994: 115-125 [doi]

Approximate Tree Matching in the Presence of Variable Length Don t CaresKaizhong Zhang, Dennis Shasha, Jason Tsong-Li Wang. jal, 16(1):33-66, 1994.

A Knowledge-Based Tutoring System for SQL ProgrammingGang Zhou, Jason Tsong-Li Wang, Peter A. Ng. ictai 1994: 352-358

1993

A Tool for Classifying Office DocumentsXiaolong Hao, Jason Tsong-Li Wang, Michael P. Bieber, Peter A. Ng. ictai 1993: 427-434

An OI5ce Document Retrieval System with the Capability of Processing Incomplete and Vague QueriesQianhong Liu, Jason Tsong-Li Wang, Peter A. Ng. seke 1993: 11-17

An Intelligent Documentation Support EnvironmentJason Tsong-Li Wang, Fortune S. Mhlanga, Qianhong Liu, Wen-Chung Shang, Peter A. Ng. seke 1993: 429-436

1992

Pattern Matching in Unordered TreesDennis Shasha, Jason Tsong-Li Wang, Kaizhong Zhang, Frank Yeong-Chyang Shih. ictai 1992: 352-361

Fast Serial and Parallel Algorithms for Approximate Tree Matching with VLDC sKaizhong Zhang, Dennis Shasha, Jason Tsong-Li Wang. cpm 1992: 151-161

1991

Optimizing Equijoin Queries In Distributed Databases Where Relations Are Hash PartitionedDennis Shasha, Jason Tsong-Li Wang. tods, 16(2):279-308, 1991. [doi]

1990

New Techniques for Best-Match RetrievalDennis Shasha, Jason Tsong-Li Wang. tois, 8(2):140-158, 1990. [doi]

Query Processing for Distance MetricsJason Tsong-Li Wang, Dennis Shasha. VLDB 1990: 602-613 [doi]