Michael Hackenberg - researchr alias

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Viewing Publication 1 - 26 from 26

2023

2022

2020

mirnaQC: a webserver for comparative quality control of miRNA-seq dataErnesto Aparicio-Puerta, Cristina Gómez-Martín, Stavros Giannoukakos, José María Medina, Juan A. Marchal, Michael Hackenberg. nar, 48(Webserver-Issue), 2020. [doi]

MirGeneDB 2.0: the metazoan microRNA complementBastian Fromm, Diana Domanska, Eirik Høye, Vladimir Ovchinnikov, Wenjing Kang, Ernesto Aparicio-Puerta, Morten Johansen, Kjersti Flatmark, Anthony Mathelier, Eivind Hovig, Michael Hackenberg, Marc R. Friedländer, Kevin J. Peterson. nar, 48(Database-Issue), 2020. [doi]

Applying Feature Selection to Improve Predictive Performance and Explainability in Lung Cancer Detection with Soft ComputingNicolas Potie, Stavros Giannoukakos, Michael Hackenberg, Alberto Fernandez. hicss 2020: 1-10 [doi]

2019

2017

Error Correction in Methylation Profiling From NGS Bisulfite ProtocolsGuillermo Barturen, José L. Oliver, Michael Hackenberg. In Mourad Elloumi, editor, Algorithms for Next-Generation Sequencing Data, Techniques, Approaches, and Applications. pages 167-183, Springer, 2017. [doi]

NGSmethDB 2017: enhanced methylomes and differential methylationRicardo Lebrón, Cristina Gómez-Martín, Pedro Carpena, Pedro Bernaola-Galván, Guillermo Barturen, Michael Hackenberg, José L. Oliver. nar, 45(Database-Issue), 2017. [doi]

2015

sRNAtoolbox: an integrated collection of small RNA research toolsAntonio Rueda, Guillermo Barturen, Ricardo Lebrón, Cristina Gómez-Martín, Ángel M. Alganza, José L. Oliver, Michael Hackenberg. nar, 43(Webserver-Issue), 2015. [doi]

2014

DNA clustering and genome complexityFrancisco Dios, Guillermo Barturen, Ricardo Lebrón, Antonio Rueda, Michael Hackenberg, José L. Oliver. CANDC, 53:71-78, 2014. [doi]

NGSmethDB: an updated genome resource for high quality, single-cytosine resolution methylomesStefanie Geisen, Guillermo Barturen, Ángel M. Alganza, Michael Hackenberg, José L. Oliver. nar, 42(Database-Issue):53-59, 2014. [doi]

2013

Best practices for SNV and methylation calling from bisulfite sequencing dataGuillermo Barturen, José L. Oliver, Michael Hackenberg. iwbbio 2013: 125 [doi]

2011

2010

TargetSpy: a supervised machine learning approach for microRNA target predictionMartin Sturm, Michael Hackenberg, David Langenberger, Dmitrij Frishman. bmcbi, 11:292, 2010. [doi]

2009

miRanalyzer: a microRNA detection and analysis tool for next-generation sequencing experimentsMichael Hackenberg, Martin Sturm, David Langenberger, Juan Manuel FalcÃ³n-PÃ©rez, Ana M. Aransay. nar, 37(Web-Server-Issue):68-76, 2009. [doi]

ContDist: a tool for the analysis of quantitative gene and promoter propertiesMichael Hackenberg, Gorka Lasso, Rune Matthiesen. bmcbi, 10, 2009. [doi]

2008

Annotation-Modules: a tool for finding significant combinations of multisource annotations for gene listsMichael Hackenberg, Rune Matthiesen. bioinformatics, 24(11):1386-1393, 2008. [doi]

2006

::::CpGcluster::::: a distance-based algorithm for CpG-island detectionMichael Hackenberg, Christopher Previti, Pedro Luis Luque-Escamilla, Pedro Carpena, JosÃ© MartÃnez-Aroza, JosÃ© L. Oliver. bmcbi, 7:446, 2006. [doi]

2004

IsoFinder: computational prediction of isochores in genome sequencesJosé L. Oliver, Pedro Carpena, Michael Hackenberg, Pedro Bernaola-Galván. nar, 32(Web-Server-Issue):287-292, 2004.

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