Eivind Hovig - researchr alias

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Viewing Publication 1 - 31 from 31

2023

screenwerk: a modular tool for the design and analysis of drug combination screensRobert Hanes, Pilar Ayuda-Durán, Leiv Rønneberg, Sigve Nakken, Eivind Hovig, Manuela Zucknick, Jorrit M. Enserink. bioinformatics, 39(1), January 2023. [doi]

2022

2021

The immuneML ecosystem for machine learning analysis of adaptive immune receptor repertoiresMilena Pavlovic, Lonneke Scheffer, Keshav Motwani, Chakravarthi Kanduri, Radmila Kompova, Nikolay Vazov, Knut Waagan, Fabian L. M. Bernal, Alexandre Almeida Costa, Brian Corrie, Rahmad Akbar, Ghadi S. Al Hajj, Gabriel Balaban, Todd M. Brusko, Maria Chernigovskaya, Scott Christley, Lindsay G. Cowell, Robert Frank, Ivar Grytten, Sveinung Gundersen, Ingrid Hobæk Haff, Eivind Hovig, Ping Han Hsieh, Günter Klambauer, Marieke L. Kuijjer, Christin Lund-Andersen, Antonio Martini, Thomas Minotto, Johan Pensar, Knut D. Rand, Enrico Riccardi, Philippe A. Robert, Artur Rocha, Andrei Slabodkin, Igor Snapkov, Ludvig M. Sollid, Dmytro Titov, Cédric R. Weber, Michael Widrich, Gur Yaari, Victor Greiff, Geir Kjetil Sandve. natmi, 3(11):936-944, 2021. [doi]

2020

MirGeneDB 2.0: the metazoan microRNA complementBastian Fromm, Diana Domanska, Eirik Høye, Vladimir Ovchinnikov, Wenjing Kang, Ernesto Aparicio-Puerta, Morten Johansen, Kjersti Flatmark, Anthony Mathelier, Eivind Hovig, Michael Hackenberg, Marc R. Friedländer, Kevin J. Peterson. nar, 48(Database-Issue), 2020. [doi]

The ELIXIR Human Copy Number Variations Community: building bioinformatics infrastructure for researchDavid Salgado, Irina M. Armean, Michael Baudis, Sergi Beltran, Salvador Capella-Gutiérrez, Denise Carvalho-Silva, Victoria Dominguez Del Angel, Joaquín Dopazo, Laura I. Furlong, Bo Gao, Leyla Jael García-Castro, Dietlind Gerloff, Ivo Gut, Attila Gyenesei, Nina Habermann, John M. Hancock, Marc Hanauer, Eivind Hovig, Lennart F. Johansson, Thomas Keane, Jan Korbel, Katharina B. Lauer, Steve Laurie, Brane Leskosek, David Lloyd, Tomàs Marquès-Bonet, Hailiang Mei, Katalin Monostory, Janet Piñero, Krzysztof Poterlowicz, Ana Rath, Pubudu Samarakoon, Ferran Sanz, Gary Saunders, Daoud Sie, Morris A. Swertz, Kirill Tsukanov, Alfonso Valencia, Marko Vidak, Cristina Yenyxe González, Bauke Ylstra, Christophe Béroud. f1000research, 9:1229, 2020. [doi]

2019

Colocalization analyses of genomic elements: approaches, recommendations and challengesChakravarthi Kanduri, Christoph Bock, Sveinung Gundersen, Eivind Hovig, Geir Kjetil Sandve. bioinformatics, 35(9):1615-1624, 2019. [doi]

2018

Filesystem Front-end for Seamless Job Management in Sensitive Data e-Infrastructures and Cloud FederationAbdulrahman Azab, Hein Meling, Eivind Hovig, Antti Pursula. bigdataconf 2018: 5126-5131 [doi]

Personal Cancer Genome Reporter: variant interpretation report for precision oncologySigve Nakken, Ghislain Fournous, Daniel Vodák, Lars Birger Aasheim, Ola Myklebost, Eivind Hovig. bioinformatics, 34(10):1778-1780, 2018. [doi]

2017

The rainfall plot: its motivation, characteristics and pitfallsDiana Domanska, Daniel Vodák, Christin Lund-Andersen, Stefania Salvatore, Eivind Hovig, Geir Kjetil Sandve. bmcbi, 18(1), 2017. [doi]

2016

Galaxy Portal: interacting with the galaxy platform through mobile devicesClaus Børnich, Ivar Grytten, Eivind Hovig, Jonas Paulsen, Martin Cech, Geir Kjetil Sandve. bioinformatics, 32(11):1743-1745, 2016. [doi]

Profiling networks of distinct immune-cells in tumorsTrevor Clancy, Eivind Hovig. bmcbi, 17:263, 2016. [doi]

2014

2013

Pathway analysis of genetic markers associated with a functional MRI faces paradigm implicates polymorphisms in calcium responsive pathwaysMorten Mattingsdal, Andrew Anand Brown, Srdjan Djurovic, Ida Elken Sønderby, Andres Server, Ingrid Melle, Ingrid Agartz, Eivind Hovig, Jimmy Jensen, Ole A. Andreassen. neuroimage, 70:143-149, 2013. [doi]

Ten Simple Rules for Reproducible Computational ResearchGeir Kjetil Sandve, Anton Nekrutenko, James Taylor, Eivind Hovig. ploscb, 9(10), 2013. [doi]

2012

Towards a quantitative understanding of the MITF-PIAS3-STAT3 connectionJosef Thingnes, Timothy J. Lavelle, Arne B. Gjuvsland, Stig W. Omholt, Eivind Hovig. bmcsb, 6:11, 2012. [doi]

2011

Identifying elemental genomic track types and representing them uniformlySveinung Gundersen, Matús Kalas, Osman Abul, Arnoldo Frigessi, Eivind Hovig, Geir Kjetil Sandve. bmcbi, 12:494, 2011. [doi]

2010

Combining Network Modeling and Gene Expression Microarray Analysis to Explore the Dynamics of Th1 and Th2 Cell RegulationMarco Pedicini, Fredrik Barrenäs, Trevor Clancy, Filippo Castiglione, Eivind Hovig, Kartiek Kanduri, Daniele Santoni, Mikael Benson. ploscb, 6(12), 2010. [doi]

2009

The mathematics of tanningJosef Thingnes, Leiv Øyehaug, Eivind Hovig, Stig W. Omholt. bmcsb, 3:60, 2009. [doi]

2007

The Human Genomic Melting MapFang Liu, Eivind Tøstesen, Jostein K. Sundet, Tor-Kristian Jenssen, Christoph Bock, Geir Ivar Jerstad, William G. Thilly, Eivind Hovig. ploscb, 3(5), 2007. [doi]

2005

Stitchprofiles.uio.no: analysis of partly melted DNA conformations using stitch profilesEivind Tøstesen, Geir Ivar Jerstad, Eivind Hovig. nar, 33(Web-Server-Issue):573-576, 2005. [doi]

2004

FigSearch: a figure legend indexing and classification systemFang Liu, Tor-Kristian Jenssen, Vegard Nygaard, John Sack, Eivind Hovig. bioinformatics, 20(16):2880-2882, 2004. [doi]

FigSearch: Using Maximum Entropy Classifier to Categorize Biological FiguresFang Liu, Tor-Kristian Jenssen, Vegard Nygaard, John Sack, Eivind Hovig. csb 2004: 476-477 [doi]

2003

Tumor classification and marker gene prediction by feature selection and fuzzy c-means clustering using microarray dataJunbai Wang, Trond Hellem Bø, Inge Jonassen, Ola Myklebost, Eivind Hovig. bmcbi, 4:60, 2003. [doi]

MGraph: graphical models for microarray data analysisJunbai Wang, Ola Myklebost, Eivind Hovig. bioinformatics, 19(17):2210-2211, 2003.

2002

MArray: analysing single, replicated or reversed microarray experimentsJunbai Wang, Vigdis Nygaard, Birgitte Smith-Sørensen, Eivind Hovig, Ola Myklebost. bioinformatics, 18(8):1139-1140, 2002.

2000

Towards Knowledge Discovery from cDNA Microarray Gene Expression DataHenryk Jan Komorowski, Torgeir R. Hvidsten, Tor-Kristian Jenssen, Dyre Tjeldvoll, Eivind Hovig, Arne K. Sandvik, Astrid Lægreid. pkdd 2000: 470-475 [doi]

1997

Database of p53 gene somatic mutations in human tumors and cell lines: updated compilation and future prospectsP. Hainaut, Thierry Soussi, Benny Shomer, M. Hollstein, M. Greenblatt, Eivind Hovig, C. C. Harris, R. Montesano. nar, 25(1):151-157, 1997.

1996

Somatic point mutations in the p53 gene of human tumors and cell lines: updated compilationM. Hollstein, Benny Shomer, M. Greenblatt, Thierry Soussi, Eivind Hovig, R. Montesano, C. C. Harris. nar, 24(1):141-146, 1996.

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