Alba C. M. A. Melo - researchr alias

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Viewing Publication 1 - 25 from 25

2023

Optimizing computational costs of Spark for SARS-CoV-2 sequences comparisons on a commercial cloudAlan L. Nunes, Alba C. M. A. Melo, Claude Tadonki, Cristina Boeres, Daniel de Oliveira 0001, Lúcia Maria de Assumpção Drummond. concurrency, 35(18), 2023. [doi]

A Novel Statistical and Neural Network Combined Approach for the Cloud Spot MarketGustavo Portella, Eduardo Y. Nakano, Genaína Nunes Rodrigues, Azzedine Boukerche, Alba C. M. A. Melo. tcc, 11(1):278-290, January - March 2023. [doi]

2022

Efficient microscopy image analysis on CPU-GPU systems with cost-aware irregular data partitioningWillian Barreiros Jr., Alba C. M. A. Melo, Jun Kong, Renato Ferreira 0001, Tahsin M. Kurç, Joel H. Saltz, George Teodoro. jpdc, 164:40-54, 2022. [doi]

2021

A Fault Tolerant and Deadline Constrained Sequence Alignment Application on Cloud-Based Spot GPU InstancesRafaela C. Brum, Walisson P. Sousa, Alba C. M. A. Melo, Cristiana Bentes, Maria Clicia Stelling de Castro, Lúcia Maria de A. Drummond. europar 2021: 317-333 [doi]

Parallel Fine-Grained Comparison of Long DNA Sequences in Homogeneous and Heterogeneous GPU Platforms With PruningMarco Antonio C. de Figueiredo, João Paulo Navarro, Edans Flavius de Oliveira Sandes, George Teodoro, Alba C. M. A. Melo. tpds, 32(12):3053-3065, 2021. [doi]

Building robust pathology image analyses with uncertainty quantificationJeremias M. Gomes, Jun Kong, Tahsin M. Kurç, Alba C. M. A. Melo, Renato Ferreira 0001, Joel H. Saltz, George Teodoro. cmpb, 208:106291, 2021. [doi]

A CPU-FPGA heterogeneous approach for biological sequence comparison using high-level synthesisCarlos Antônio Campos Jorge, Alexandre Solon Nery, Alba C. M. A. Melo, Alfredo Goldman. concurrency, 33(4), 2021. [doi]

CellHeap: A Workflow for Optimizing COVID-19 Single-Cell RNA-Seq Data Processing in the Santos Dumont SupercomputerVanessa S. Silva, Maiana O. C. Costa, Maria Clicia Stelling de Castro, Helena S. Silva, Maria Emília M. T. Walter, Alba C. M. A. Melo, Kary A. C. Ocaña, Marcelo T. dos Santos, Marisa F. Nicolas, Anna Cristina C. Carvalho, Andrea Henriques-Pons, Fabrício Alves Barbosa da Silva. wob 2021: 41-52 [doi]

Comparing SARS-CoV-2 Sequences using a Commercial Cloud with a Spot Instance Based Dynamic SchedulerLuan Teylo, Alan L. Nunes, Alba C. M. A. Melo, Cristina Boeres, Lúcia Maria de A. Drummond, Natalia F. Martins. ccgrid 2021: 247-256 [doi]

2020

Parallel Comparison of Huge DNA Sequences in Multiple GPUs with Block PruningMarco Antonio C. de Figueiredo, Edans Flavius de Oliveira Sandes, George Teodoro, Alba C. M. A. Melo. pdp 2020: 22-29 [doi]

Bitmap filter: Speeding up exact set similarity joins with bitwise operationsEdans F. de O. Sandes, George Luiz Medeiros Teodoro, Alba C. M. A. Melo. is, 88, 2020. [doi]

Optimizing parameter sensitivity analysis of large-scale microscopy image analysis workflows with multilevel computation reuseWillian Barreiros Jr., Jeremias Moreira, Tahsin M. Kurç, Jun Kong, Alba C. M. A. Melo, Joel H. Saltz, George Teodoro. concurrency, 32(2), 2020. [doi]

MASA-StarPU: Parallel Sequence Comparison with Multiple Scheduling Policies and PruningRafael A. Lopes, Samuel Thibault, Alba C. M. A. Melo. sbac-pad 2020: 225-232 [doi]

Using GPU to accelerate the pairwise structural RNA alignment with base pair probabilitiesDaniel Sundfeld, George Teodoro, Jakob Hull Havgaard, Jan Gorodkin, Alba C. M. A. Melo. concurrency, 32(10), 2020. [doi]

2019

Sensitivity analysis in digital pathology: Handling large number of parameters with compute expensive workflowsJeremias M. Gomes, Willian Barreiros, Tahsin M. Kurç, Alba C. M. A. Melo, Jun Kong, Joel H. Saltz, George Teodoro. cbm, 108:371-381, 2019. [doi]

Statistical analysis of Amazon EC2 cloud pricing modelsGustavo Portella, Genaína Nunes Rodrigues, Eduardo Y. Nakano, Alba C. M. A. Melo. concurrency, 31(18), 2019. [doi]

Utility-Based Strategy for Balanced Cost and Availability at the Cloud Spot MarketGustavo Portella, Eduardo Y. Nakano, Genaína Nunes Rodrigues, Alba C. M. A. Melo. IEEEcloud 2019: 214-218 [doi]

Multiagent system for dynamic resource provisioning in cloud computing platformsCélia Ghedini Ralha, Aldo H. D. Mendes, Luiz A. Laranjeira, Aletéia P. F. Araújo, Alba C. M. A. Melo. fgcs, 94:80-96, 2019. [doi]

Using Multiple Fickett Bands to Accelerate Biological Sequence ComparisonsGabriel H. G. Silva, Edans F. de O. Sandes, George Teodoro, Alba C. M. A. Melo. jcb, 26(9):908-922, 2019. [doi]

Multi-objective Parameter Auto-tuning for Tissue Image Segmentation WorkflowsLuis F. R. Taveira, Tahsin M. Kurç, Alba C. M. A. Melo, Jun Kong, Erich Bremer, Joel H. Saltz, George Teodoro. jdi, 32(3):521-533, 2019. [doi]

2017

2005

Obtaining possible execution histories on multiple memory consistency modelsAlba C. M. A. Melo, Nilo S. B. Silva, Hammurabi C. Mendes, Diego F. Aranha. sccc 2005: 93-100 [doi]

2002

Using ant-behavior-based simulation model AntWeb to improve website organizationWeigang Li, Marcos Vinícius Pinheiro Dib, Wesley Martins Teles, Vlaudemir Morais de Andrade, Alba C. M. A. Melo, Judas T. Cariolano. dmkdttt 2002: 229-240 [doi]

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