Alexey V. Kochetov - researchr alias

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Viewing Publication 1 - 12 from 12

2017

AltORFev facilitates the prediction of alternative open reading frames in eukaryotic mRNAsAlexey V. Kochetov, Jens Allmer, Alexandra I. Klimenko, Bulat S. Zuraev, Yury G. Matushkin, Sergey A. Lashin. bioinformatics, 33(6):923-925, 2017. [doi]

2016

PGMiner reloaded, fully automated proteogenomic annotation tool linking genomes to proteomesCanan Has, Sergey A. Lashin, Alexey V. Kochetov, Jens Allmer. jib, 13(4), 2016. [doi]

2013

Subcellular Localization Charts: a New Visual Methodology for the Semi-Automatic Localization of protein-Related Data SetsBjörn Sommer, Benjamin Kormeier, Pavel Demenkov, Patrizio Arrigo, Klaus Hippe, Özgür Ates, Alexey V. Kochetov, Vladimir A. Ivanisenko, Nikolay A. Kolchanov, Ralf Hofestädt. jbcb, 11(1), 2013. [doi]

2010

Visualization and Analysis of a Cardio Vascular Disease- and MUPP1-related Biological Network combining Text Mining and Data Warehouse ApproachesBjörn Sommer, Evgeny S. Tiys, Benjamin Kormeier, Klaus Hippe, Sebastian Janowski, Timofey V. Ivanisenko, Anatoly O. Bragin, Patrizio Arrigo, Pavel Demenkov, Alexey V. Kochetov, Vladimir A. Ivanisenko, Nikolay A. Kolchanov, Ralf Hofestädt. jib, 7(1), 2010. [doi]

2007

AUG_hairpin: prediction of a downstream secondary structure influencing the recognition of a translation start siteAlexey V. Kochetov, Andrey Palyanov, Igor I. Titov, Dmitry A. Grigorovich, Akinori Sarai, Nikolay A. Kolchanov. bmcbi, 8, 2007. [doi]

2005

AUG codons at the beginning of protein coding sequences are frequent in eukaryotic mRNAs with a suboptimal start codon contextAlexey V. Kochetov. bioinformatics, 21(7):837-840, 2005. [doi]

2004

Translational polymorphism as a potential source of plant proteins variety in ::::Arabidopsis thaliana::::Alexey V. Kochetov, Akinori Sarai. bioinformatics, 20(4):445-447, 2004. [doi]

2001

Presence of ATG triplets in 5 untranslated regions of eukaryotic cDNAs correlates with a weak context of the start codonIgor B. Rogozin, Alexey V. Kochetov, Fyodor A. Kondrashov, Eugene V. Koonin, Luciano Milanesi. bioinformatics, 17(10):890-900, 2001.

1999

1998

1996

Comparative Analysis of the Secondary Structure of mRNA Encoded by High- and Low-Expression Eukaryotic GenesI. V. Ischenko, Alexey V. Kochetov, Alexander E. Kel, Nikolay A. Kolchanov, L. L. Kisselev. gcb 1997: 124-129

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