Ali Rana Atilgan - researchr alias

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Viewing Publication 1 - 9 from 9

2023

E. coli DHFREbru Cetin, Tandac F. Guclu, Isik Kantarcioglu, Ilona K. Gaszek, Erdal Toprak, Ali Rana Atilgan, Burcu Dedeoglu, Canan Atilgan. jcisd, 63(15):4839-4849, August 2023. [doi]

2022

DHFR Mutants Modulate Their Synchronized Dynamics with the Substrate by Shifting Hydrogen Bond OccupanciesEbru Çetin, Ali Rana Atilgan, Canan Atilgan. jcisd, 62(24):6715-6726, 2022. [doi]

2021

N-Terminus of the Third PDZ Domain of PSD-95 Orchestrates Allosteric Communication for Selective Ligand BindingTandac F. Guclu, Nazli Kocatug, Ali Rana Atilgan, Canan Atilgan. jcisd, 61(1):347-357, 2021. [doi]

Could network structures generated with simple rules imposed on a cubic lattice reproduce the structural descriptors of globular proteins?Osman Burak Okan, Deniz Turgut, Canan Atilgan, Ali Rana Atilgan, Rahmi Ozisik. compnet, 10(1), 2021. [doi]

2018

MODE-TASK: large-scale protein motion toolsCaroline Ross, Bilal Nizami, Michael Glenister, Olivier Sheik Amamuddy, Ali Rana Atilgan, Canan Atilgan, Özlem Tastan Bishop. bioinformatics, 34(21):3759-3763, 2018. [doi]

2017

MD-TASK: a software suite for analyzing molecular dynamics trajectoriesDavid K. Brown, David L. Penkler, Olivier Sheik Amamuddy, Caroline Ross, Ali Rana Atilgan, Canan Atilgan, Özlem Tastan Bishop. bioinformatics, 33(17):2768-2771, 2017. [doi]

2013

Designing Molecular Dynamics Simulations to Shift Populations of the Conformational States of CalmodulinAyse Ozlem Aykut, Ali Rana Atilgan, Canan Atilgan. ploscb, 9(12), 2013. [doi]

2009

Perturbation-Response Scanning Reveals Ligand Entry-Exit Mechanisms of Ferric Binding ProteinCanan Atilgan, Ali Rana Atilgan. ploscb, 5(10), 2009. [doi]

2008

Collective Behavior of el Farol AttendeesCanan Atilgan, Ali Rana Atilgan, Güven Demirel. advcs, 11(4):629-639, 2008. [doi]

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