Anil G. Jegga - researchr alias

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Viewing Publication 1 - 30 from 30

2022

Multimodal feature learning framework for disease biomarker discoverySudhir Ghandikota, Jaswanth K. Yella, Anil G. Jegga. bibm 2022: 3252-3259 [doi]

MGATRx: Discovering Drug Repositioning Candidates Using Multi-View Graph AttentionJaswanth K. Yella, Anil G. Jegga. tcbb, 19(5):2596-2604, 2022. [doi]

GraMDTA: Multimodal Graph Neural Networks for Predicting Drug-Target AssociationsJaswanth K. Yella, Sudhir Ghandikota, Anil G. Jegga. bibm 2022: 1957-1965 [doi]

2021

Secondary analysis of transcriptomes of SARS-CoV-2 infection models to characterize COVID-19Sudhir Ghandikota, Mihika Sharma, Anil G. Jegga. patterns, 2(5):100247, 2021. [doi]

2020

Triangle-Based Tripartite Graph ClusteringYizong Cheng, Jaswanth K. Yella, Anil G. Jegga. bibm 2020: 1769-1776 [doi]

A multi-context feature learning approach to identify disease-specific gene neighborhoodsSudhir Ghandikota, Anil G. Jegga. bcb 2020: [doi]

2014

ToppMiR: ranking microRNAs and their mRNA targets based on biological functions and contextChao Wu, Eric E. Bardes, Anil G. Jegga, Bruce J. Aronow. nar, 42(Webserver-Issue):107-113, 2014. [doi]

2013

Integrative genomics identifies candidate microRNAs for pathogenesis of experimental biliary atresiaKazuhiko Bessho, Kumar Shanmukhappa, Rachel Sheridan, Pranavkumar Shivakumar, Reena Mourya, Stephanie Walters, Vivek Kaimal, Eric Dilbone, Anil G. Jegga, Jorge A. Bezerra. bmcsb, 7:104, 2013. [doi]

Large-scale evaluation of automated clinical note de-identification and its impact on information extractionLouise Deléger, Katalin Molnár, Guergana Savova, Fei Xia, Todd Lingren, Qi Li, Keith Marsolo, Anil G. Jegga, Megan Kaiser, Laura Stoutenborough, Imre Solti. jamia, 20(1):84-94, 2013. [doi]

Mining FDA drug labels for medical conditionsQi Li, Louise Deléger, Todd Lingren, Haijun Zhai, Megan Kaiser, Laura Stoutenborough, Anil G. Jegga, Kevin Bretonnel Cohen, Imre Solti. midm, 13:53, 2013. [doi]

Computational drug repositioning through heterogeneous network clusteringChao Wu, Ranga Chandra Gudivada, Bruce J. Aronow, Anil G. Jegga. bmcsb, 7(S-5), 2013. [doi]

A Biclustering Algorithm to Discover Functional Modules from ENCODE ChIP-Seq DataChao Wu, Arjun Bakshi, Bruce J. Aronow, Anil G. Jegga, Raj Bhatnagar. icdm 2013: 96-103 [doi]

2012

A vertex similarity-based framework to discover and rank orphan disease-related genesCheng Zhu, Akash Kushwaha, Kenneth Berman, Anil G. Jegga. bmcsb, 6(S-3), 2012. [doi]

2011

2010

2009

Correction: Disease candidate gene identification and prioritization using protein interaction networksJing Chen, Bruce J. Aronow, Anil G. Jegga. bmcbi, 10:406, 2009. [doi]

ToppGene Suite for gene list enrichment analysis and candidate gene prioritizationJing Chen, Eric E. Bardes, Bruce J. Aronow, Anil G. Jegga. nar, 37(Web-Server-Issue):305-311, 2009. [doi]

Disease candidate gene identification and prioritization using protein interaction networksJing Chen, Bruce J. Aronow, Anil G. Jegga. bmcbi, 10, 2009. [doi]

Regression based predictor for p53 transactivationSivakumar Gowrisankar, Anil G. Jegga. bmcbi, 10, 2009. [doi]

Inferring novel disease indications for known drugs by semantically linking drug action and disease mechanism relationshipsXiaoyan A. Qu, Ranga Chandra Gudivada, Anil G. Jegga, Eric K. Neumann, Bruce J. Aronow. bmcbi, 10(S-5), 2009. [doi]

2008

Identifying disease-causal genes using Semantic Web-based representation of integrated genomic and phenomic knowledgeRanga Chandra Gudivada, Xiaoyan A. Qu, Jing Chen, Anil G. Jegga, Eric K. Neumann, Bruce J. Aronow. jbi, 41(5):717-729, 2008. [doi]

2007

Improved human disease candidate gene prioritization using mouse phenotypeJing Chen, Huan Xu, Bruce J. Aronow, Anil G. Jegga. bmcbi, 8, 2007. [doi]

PolyDoms: a whole genome database for the identification of non-synonymous coding SNPs with the potential to impact diseaseAnil G. Jegga, Sivakumar Gowrisankar, Jing Chen, Bruce J. Aronow. nar, 35(Database-Issue):700-706, 2007. [doi]

GenomeTrafac: a whole genome resource for the detection of transcription factor binding site clusters associated with conventional and microRNA encoding genes conserved between mouse and human gene orthologsAnil G. Jegga, Jing Chen, Sivakumar Gowrisankar, Mrunal A. Deshmukh, Ranga Chandra Gudivada, Sue Kong, Vivek Kaimal, Bruce J. Aronow. nar, 35(Database-Issue):116-121, 2007. [doi]

Identifying Functional Binding Motifs of Tumor Protein p53 Using Support Vector MachinesAmit U. Sinha, Mukta Phatak, Raj Bhatnagar, Anil G. Jegga. icmla 2008: 506-511 [doi]

2005

CisMols Analyzer: identification of compositionally similar ::::cis::::-element clusters in ortholog conserved regions of coordinately expressed genesAnil G. Jegga, Ashima Gupta, Sivakumar Gowrisankar, Mrunal A. Deshmukh, Steven Connolly, Kevin Finley, Bruce J. Aronow. nar, 33(Web-Server-Issue):408-411, 2005. [doi]

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