Hiroyuki Toh - researchr alias

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Viewing Publication 1 - 22 from 22

2018

Implementing LOD Surfer as a Search System for the Annotation of Multiple Protein Sequence AlignmentAtsuko Yamaguchi, Hiroyuki Toh. jist 2018: 418-426 [doi]

2016

Profile comparison revealed deviation from structural constraint at the positively selected sitesHiroyuki Oda, Motonori Ota, Hiroyuki Toh. biosystems, 147:67-77, 2016. [doi]

2011

DROP: an SVM domain linker predictor trained with optimal features selected by random forestTeppei Ebina, Hiroyuki Toh, Yutaka Kuroda. bioinformatics, 27(4):487-494, 2011. [doi]

2010

2008

Recent developments in the MAFFT multiple sequence alignment programKazutaka Katoh, Hiroyuki Toh. bib, 9(4):286-298, 2008. [doi]

Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based frameworkKazutaka Katoh, Hiroyuki Toh. bmcbi, 9, 2008. [doi]

2007

PartTree: an algorithm to build an approximate tree from a large number of unaligned sequencesKazutaka Katoh, Hiroyuki Toh. bioinformatics, 23(3):372-374, 2007. [doi]

Inference of Protein-Protein Interactions by Using Co-evolutionary InformationTetsuya Sato, Yoshihiro Yamanishi, Katsuhisa Horimoto, Minoru Kanehisa, Hiroyuki Toh. ab 2007: 322-333 [doi]

ASH structure alignment package: Sensitivity and selectivity in domain classificationDaron M. Standley, Hiroyuki Toh, Haruki Nakamura. bmcbi, 8, 2007. [doi]

2006

Partial correlation coefficient between distance matrices as a new indicator of protein-protein interactionsTetsuya Sato, Yoshihiro Yamanishi, Katsuhisa Horimoto, Minoru Kanehisa, Hiroyuki Toh. bioinformatics, 22(20):2488-2492, 2006. [doi]

2005

2004

ASIAN: a website for network inferenceSachiyo Aburatani, Kousuke Goto, Shigeru Saito, Masaki Fumoto, Akira Imaizumi, Nobuyoshi Sugaya, Hiroo Murakami, Makihiko Sato, Hiroyuki Toh, Katsuhisa Horimoto. bioinformatics, 20(16):2853-2856, 2004. [doi]

2003

Deduction of a gene regulatory relationship framework from gene expression data by the application of graphical Gaussian modelingSachiyo Aburatani, Satoru Kuhara, Hiroyuki Toh, Katsuhisa Horimoto. sigpro, 83(4):777-788, 2003. [doi]

2002

Inference of a genetic network by a combined approach of cluster analysis and graphical Gaussian modelingHiroyuki Toh, Katsuhisa Horimoto. bioinformatics, 18(2):287-297, 2002.

2001

Statistical estimation of cluster boundaries in gene expression profile dataKatsuhisa Horimoto, Hiroyuki Toh. bioinformatics, 17(12):1143-1151, 2001.

1998

A method for comparing circular genomes from gene locations: application to mitochondrial genomesKatsuhisa Horimoto, M. Suyama, Hiroyuki Toh, Kentaro Mori, Jinya Otsuka. bioinformatics, 14(9):789-802, 1998.

1997

Introduction of a distance cut-off into structural alignment by the double dynamic programming algorithmHiroyuki Toh. bioinformatics, 13(4):387-396, 1997.

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