Homayoun Valafar - researchr alias

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Viewing Publication 1 - 36 from 36

2022

2021

Computational modeling of SARS-CoV-2 Nsp1 binding to human ribosomal 40S complexLinkel Boateng, Anita Nag, Homayoun Valafar. bcb 2021: [doi]

REDCRAFT: A computational platform using residual dipolar coupling NMR data for determining structures of perdeuterated proteins in solutionCasey A. Cole, Nourhan S. Daigham, Gaohua Liu, Gaetano T. Montelione, Homayoun Valafar. ploscb, 17(2), 2021. [doi]

2020

Increased usability, algorithmic improvements and incorporation of data mining for structure calculation of proteins with REDCRAFT software packageCasey A. Cole, Caleb Parks, Julian Rachele, Homayoun Valafar. bmcbi, 21(9):204, 2020. [doi]

A Preliminary Investigation in the Molecular Basis of Host Shutoff Mechanism in SARS-CoVNiharika Pandala, Casey A. Cole, Devaun McFarland, Anita Nag, Homayoun Valafar. bcb 2020: [doi]

2019

Designing and executing a functional exercise to test a novel informatics tool for mass casualty triageSara Belle Donevant, Erik Svendsen, Jane V. Richter, Abbas Tavakoli, Jean Craig, Nicholas D. Boltin, Homayoun Valafar, Salvatore DiNardi, Joan Marie Culley. jamia, 26(10):1091-1098, 2019. [doi]

Evaluating Precisicon and Recall through the Utility of msTALI via an Active Site Study on Fold FamiliesDevaun McFarland, Caroline Bullock, Homayoun Valafar. bibm 2019: 1569-1572 [doi]

2018

Application of ensemble learning to the differential gene expression in left-right breast tumorsCasey A. Cole, Kenneth L. Nesbitt, Homayoun Valafar. cibcb 2018: 1-6 [doi]

2017

Resolving ambiguities in accelerometer data due to location of sensor on wrist in application to detection of smoking gestureCasey A. Cole, James F. Thrasher, Scott M. Strayer, Homayoun Valafar. bhi 2017: 489-492 [doi]

2016

Social networks for improving healthy weight loss behaviors for overweight and obese adults: A randomized clinical trial of the social pounds off digitally (Social POD) mobile appSarah Hales, Gabrielle M. Turner-McGrievy, Sara Wilcox, Arjang Fahim, Rachel E. Davis, Michael N. Huhns, Homayoun Valafar. ijmi, 94:81-90, 2016. [doi]

2014

Dynafold: a Dynamic Programming Approach to protein Backbone Structure determination from Minimal Sets of residual Dipolar couplingsRishi Mukhopadhyay, Stephanie Jimenez Irausquin, Chris Schmidt, Homayoun Valafar. jbcb, 12(1), 2014. [doi]

2013

Advances in the REDCAT software packageChris Schmidt, Stephanie Jimenez Irausquin, Homayoun Valafar. bmcbi, 14:302, 2013. [doi]

2012

Multiple structure alignment with msTALIPaul Shealy, Homayoun Valafar. bmcbi, 13:105, 2012. [doi]

2011

An Artificial Neural Network Based Approach for Identification of Native Protein Structures Using an Extended ForcefieldTimothy Matthew Fawcett, Stephanie Jimenez Irausquin, Mikhail Simin, Homayoun Valafar. bibm 2011: 500-505 [doi]

2009

An Investigation in Aligning Multiple Protein Structures Using Biochemical and Biophysical PropertiesPaul Shealy, Homayoun Valafar. biocomp 2009: 10-16

Using Residual Dipolar Couplings from Two Alignment Media to Detect Structural HomologyRyan Yandle, Rishi Mukhopadhyay, Homayoun Valafar. biocomp 2009: 90-95

2008

2006

Process of Efficiently Parallelizing a Protein Structure Determination AlgorithmMichael Bryson, Xijiang Miao, Homayoun Valafar. pdpta 2006: 320-326

TALI: Protein Structure Alignment Using Backbone Torsion AnglesXijiang Miao, Michael Bryson, Homayoun Valafar. psb 2006: 3-9

2004

Residual Dipolar Couplings in High Throughput Backbone Solution Structure Determination of ProteinsHomayoun Valafar, Kristen L. Mayer, Peter D. LeBlond, Catherine Bougault, James H. Prestegard. metmbs 2004: 270

Distributed Global Optimization and its Development on the MultiRing NetworkHomayoun Valafar, Hamid R. Arabnia, Gita Williams. npsc, 12:465-490, 2004.

2003

Rapid classification of a protein fold family using a statistical analysis of dipolar couplingsHomayoun Valafar, James H. Prestegard. bioinformatics, 19(12):1549-1555, 2003.

2002

Data mining and knowledge discovery in proton nuclear magnetic resonance (:::1:::H-NMR) spectra using frequency to information transformation (FIT)Homayoun Valafar, Faramarz Valafar. kbs, 15(4):251-259, 2002. [doi]

2000

Predicting the effectiveness of hydroxyurea in individual sickle cell anemia patientsHomayoun Valafar, Faramarz Valafar, Alan Darvill, Peter Albersheim, Abdullah Kutlar, Kristy F. Woods, John Hardin. artmed, 18(2):133-148, 2000.

1999

A comparative study of linear and quadratic discriminant classifier techniques for variable selection: a case study in predicting the effectiveness of hydroxyurea treatment of sickle cell anemiaSaeid Roushanzamir, Homayoun Valafar, Faramarz Valafar. ijcnn 1999: 3627-3631 [doi]

Identification of H-NMR Spectra of Xyloglucan Oligosaccharides: A Comparative Study of Artificial Neural Networks and Bayesian Classification Using Nonparametric Density EstimationFaramarz Valafar, Homayoun Valafar, William S. York. icai 1999: 549-553

A Comparative Study of Artificial Neural Networks Using Reinforcement Learning and Multidimensional Bayesian Classification Using Parzen Density Estimation for Identification of GC-EIMS Spectra of Partially Methylated Alditol Acetates on the World Wide WeFaramarz Valafar, Homayoun Valafar. icai 1999: 554-558

Prediction of a patient's response to a specific drug treatment using artificial neural networksHomayoun Valafar, Faramarz Valafar. ijcnn 1999: 3694-3697 [doi]

Parallel, self organizing, consensus neural networksHomayoun Valafar, Faramarz Valafar, Okan K. Ersoy. ijcnn 1999: 1225-1228 [doi]

1996

Distributed global optimization (DGO)Homayoun Valafar, Okan K. Ersoy, Faramarz Valafar. icnn 1996: [doi]

1995

Comparative studies of two neural network architectures for modeling of human speech productionFaramarz Valafar, Homayoun Valafar, Okan K. Ersoy, Richard G. Schwartz. icnn 1995: 2056-2061 [doi]

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