Sandrine Dudoit - researchr alias

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Viewing Publication 1 - 14 from 14

2023

Cross-Validated Loss-based Covariance Matrix Estimator Selection in High DimensionsPhilippe Boileau, Nima S. Hejazi, Mark J. van der Laan, Sandrine Dudoit. jcgs, 32(2):601-612, April 2023. [doi]

2021

cvCovEst: Cross-validated covariance matrix estimator selection and evaluation in RPhilippe Boileau, Nima S. Hejazi, Brian Collica, Mark J. van der Laan, Sandrine Dudoit. jossw, 6(63):3273, 2021. [doi]

2020

scPCA: A toolbox for sparse contrastive principal component analysis in RPhilippe Boileau, Nima S. Hejazi, Sandrine Dudoit. jossw, 5(46):2079, 2020. [doi]

Exploring high-dimensional biological data with sparse contrastive principal component analysisPhilippe Boileau, Nima S. Hejazi, Sandrine Dudoit. bioinformatics, 36(11):3422-3430, 2020. [doi]

2019

Filtering procedures for untargeted LC-MS metabolomics dataCourtney Schiffman, Lauren Petrick, Kelsi Perttula, Yukiko Yano, Henrik Carlsson, Todd Whitehead, Catherine Metayer, Josie Hayes, Stephen M. Rappaport, Sandrine Dudoit. bmcbi, 20(1), 2019. [doi]

2018

clusterExperiment and RSEC: A Bioconductor package and framework for clustering of single-cell and other large gene expression datasetsDavide Risso, Liam Purvis, Russell B. Fletcher, Diya Das, John Ngai, Sandrine Dudoit, Elizabeth Purdom. ploscb, 14(9), 2018. [doi]

2011

GC-Content Normalization for RNA-Seq DataDavide Risso, Katja Schwartz, Gavin Sherlock, Sandrine Dudoit. bmcbi, 12:480, 2011. [doi]

2010

Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experimentsJames H. Bullard, Elizabeth Purdom, Kasper D. Hansen, Sandrine Dudoit. bmcbi, 11:94, 2010. [doi]

2009

GenomeGraphs: integrated genomic data visualization with RSteffen Durinck, James Bullard, Paul T. Spellman, Sandrine Dudoit. bmcbi, 10, 2009. [doi]

2008

A general framework for statistical performance comparison of evolutionary computation algorithmsDavid Shilane, Jarno Martikainen, Sandrine Dudoit, Seppo J. Ovaska. isci, 178(14):2870-2879, 2008. [doi]

2006

Multiple Testing Methods For ChIP - Chip High Density Oligonucleotide Array DataSündüz Keles, Mark J. van der Laan, Sandrine Dudoit, Simon E. Cawley. jcb, 13(3):579-613, 2006. [doi]

A General Framework for Statistical Performance Comparison of Evolutionary Computation AlgorithmsDavid Shilane, Jarno Martikainen, Sandrine Dudoit, Seppo J. Ovaska. aia 2006: 7-12

2003

Bagging to Improve the Accuracy of A Clustering ProcedureSandrine Dudoit, Jane Fridlyand. bioinformatics, 19(9):1090-1099, 2003.

Loss-based estimation with cross-validation: applications to microarray data analysisSandrine Dudoit, Mark J. van der Laan, Sündüz Keles, Annette M. Molinaro, Sandra E. Sinisi, Siew Leng Teng. sigkdd, 5(2):56-68, 2003. [doi]

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