Shirui Pan - researchr alias

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Viewing Publication 1 - 100 from 433

2026

SRLST: a unified multimodal representation learning framework for spatial transcriptomics analysisWei Lan 0001, Xiao Deng, Tongsheng Ling, Guohang He, Xuhua Yan, Ruiqing Zheng, Min Li 0007, Shirui Pan, Yi Pan 0001. bioinformatics, 42(8), 2026. [doi]

From Few-Shot to Zero-Shot: Towards Generalist Graph Anomaly DetectionYixin Liu 0001, Shiyuan Li 0001, Yu Zheng 0013, Qingfeng Chen, Chengqi Zhang, Philip S. Yu, Shirui Pan. tkde, 38(7):4357-4372, July 2026. [doi]

Graph-Augmented Large Language Model Agents: Current Progress and Future ProspectsYixin Liu 0001, Guibin Zhang, Kun Wang 0056, Shiyuan Li 0001, Shirui Pan, Bo An 0001. expert, 41(2):45-55, March - April 2026. [doi]

OFA-MAS: One-for-All Multi-Agent System Topology Design based on Mixture-of-Experts Graph Generative ModelsShiyuan Li 0001, Yixin Liu 0001, Yu Zheng 0013, Mei Li, Quoc Viet Hung Nguyen, Shirui Pan. WWW 2026: 1333-1344 [doi]

Assemble Your Crew: Automatic Multi-agent Communication Topology Design via Autoregressive Graph GenerationShiyuan Li 0001, Yixin Liu 0001, Qingsong Wen, Chengqi Zhang, Shirui Pan. AAAI 2026: 23142-23150 [doi]

Character-Level Perturbations Disrupt LLM WatermarksZhaoxi Zhang 0001, Xiaomei Zhang 0001, Yanjun Zhang, He Zhang 0012, Shirui Pan, Bo Liu 0001, Asif Gill, Leo Yu Zhang. ndss 2026: [doi]

A review of graph neural networks for brain diseases analysisHong Yang 0003, Ruiwen Huang, Shanshan Ye, Peng Zhang 0001, Yuhuai Guo, Shirui Pan, Yanchun Zhang. ijon, 678:133174, 2026. [doi]

Towards combining multiple knowledge graphs for large language models reasoningHong Yang 0003, Zigen Zhang, Chengcheng Deng, Xiaoyan Zhu, Li Ma 0012, Peng Zhang 0001, Shirui Pan. kbs, 350:116307, 2026. [doi]

BlindGuard: Safeguarding LLM-based Multi-Agent Systems under Unknown AttacksRui Miao 0003, Yixin Liu 0001, Yili Wang 0004, Xu Shen 0002, Yue Tan, Yiwei Dai, Shirui Pan, Xin Wang 0035. acl 2026: 39215-39234 [doi]

EviCare: Enhancing Diagnosis Prediction with Deep Model-Guided Evidence for In-Context ReasoningHengyu Zhang 0005, Xuyun Zhang, Pengxiang Zhan, Linhao Luo, Hang Lv 0010, Yanchao Tan, Shirui Pan, Carl Yang 0001. kdd 2026: 1916-1927 [doi]

Graph Neural Networks for Graphs With Heterophily: A SurveyXin Zheng 0008, Yi Wang, Yixin Liu 0001, Ming Li 0065, Miao Zhang 0022, Di Jin 0001, Philip S. Yu, Shirui Pan. tkde, 38(7):4385-4404, July 2026. [doi]

IEGSCL: Interaction-Enhanced Graph Neural Sequence Contrastive Learning for Microscopic Diffusion PredictionYiru Chang, Fei Xiong, Shirui Pan, Jia Wu 0001, Liang Wang 0017, Amin Beheshti. tnn, 37(7):3262-3276, July 2026. [doi]

IAMRec: Intent-Adaptive Multimodal Recommendation with Collaborative-Modality DisentanglementJiayi Chen, Xin Zheng 0008, Yixin Liu 0001, Yi Li, Yongqiang Guo, Shirui Pan. pakdd 2026: 557-569 [doi]

Beyond Memorization: A Rigorous Evaluation Framework for Medical Knowledge EditingShigeng Chen, Linhao Luo, Zhangchi Qiu, Yanan Cao 0001, Carl Yang 0001, Shirui Pan. eacl 2026: 4727-4751 [doi]

GraphRAG-Induced Dual Knowledge Structure Graphs for Personalized Learning Path RecommendationXinghe Cheng, Zihan Zhang, Jiapu Wang, Liangda Fang, Chaobo He, Quanlong Guan, Shirui Pan, Weiqi Luo 0002. AAAI 2026: 14610-14620 [doi]

ARES: Scalable and Practical Gradient Inversion Attack in Federated Learning Through Activation RecoveryZirui Gong, Leo Yu Zhang, Yanjun Zhang, Viet Vo, Tianqing Zhu, Shirui Pan, Cong Wang. sp 2026: 2327-2345 [doi]

negMIX: Negative Mixup for OOD Generalization in Open-Set Node ClassificationJunwei Gong, Xiao Shen 0001, Zhihao Chen, Shirui Pan, Xiao Wang 0017, Xi Zhou 0009. WWW 2026: 707-718 [doi]

MFDP-LeafNet: A few-shot learning method for plant species classification using multi-feature and historical dynamic prototypical networkMd Ismail Hossen, Mohammad Awrangjeb, Shirui Pan, Mohammad Aminul Islam, Abdullah Al Mamun. mta, 85(4):357, April 2026. [doi]

Coordinator: Semantic-coordinated dynamic fusion for multi-view clusteringWei Lan, Yinghao Guo, Qingfeng Chen, Shichao Zhang 0001, Shirui Pan, Huiyu Zhou 0001, Yi Pan 0001. inffus, 132:104239, 2026. [doi]

SQL-ASTRA: Alleviating Sparse Feedback in Agentic SQL via Column-Set Matching and Trajectory AggregationLong Li, Zhijian Zhou, Jiangxuan Long 0001, Peiyang Liu, Weidi Xu, Zhe Wang 0001, Shirui Pan, Chao Qu. acl 2026: 18474-18491 [doi]

Generative Causality-Driven Network for Graph Multi-Task LearningXixun Lin, Qing Yu, Yanan Cao 0006, Lixin Zou, Chuan Zhou 0001, Jia Wu 0001, Chenliang Li 0005, Peng Zhang 0001, Shirui Pan. pami, 48(1):1029-1044, January 2026. [doi]

LexGenius: An Expert-Level Benchmark for Large Language Models in Legal General IntelligenceWenjin Liu, Haoran Luo 0001, Xin Feng, Xiang Ji, Lijuan Zhou, Rui Mao 0010, Jiapu Wang, Shirui Pan, Erik Cambria. acl 2026: 18565-18585 [doi]

Spatio -temporal-aware preference optimization for personalized radiology report generationZhenjie Luo, Libin Yang, Hui Zhang, Quan Tang, Shirui Pan, Dehong Gao, Xiaoyan Cai. eswa, 322:132364, 2026. [doi]

Nonnegative Matrix Factorization in Dimensionality Reduction: A SurveyFarid Saberi Movahed, Kamal Berahmand, Razieh Sheikhpour, Yuefeng Li, Shirui Pan, Mahdi Jalili. ACM Comput. Surv., 58(5), April 2026. [doi]

Explainable and Fine-Grained Safeguarding of LLM Multi-Agent Systems via Bi-Level Graph Anomaly DetectionJunJun Pan, Yixin Liu 0001, Rui Miao 0003, Kaize Ding, Yu Zheng 0013, Quoc Viet Hung Nguyen, Alan Wee-Chung Liew, Shirui Pan. acl 2026: 30491-30506 [doi]

Correcting False Alarms from Unseen: Adapting Graph Anomaly Detectors at Test TimeJunJun Pan, Yixin Liu 0001, Chuan Zhou 0001, Fei Xiong, Alan Wee-Chung Liew, Shirui Pan. AAAI 2026: 24691-24699 [doi]

Meta-Learning Driven Few-Shot Knowledge Transfer with Dual-Stage Adaptive Data Replay for Cross-Domain RecommendationYilei Qiu, Fei Xiong, Jun Hu, Shirui Pan, Liang Wang 0017. WWW 2026: 1104-1114 [doi]

Contrastive knowledge embedding with discriminative self-weighted samplingSheng Wan, Yibing Zhan, Shirui Pan, Jian Yang 0003, Chen Gong 0002. NN, 199:108749, 2026. [doi]

LiSA: A linear graph transformer framework with sample aggregationQian Wang, Qingfeng Chen, Shiyuan Li 0001, Shirui Pan. kbs, 342:115905, 2026. [doi]

Multi-Source Unsupervised Graph Domain Adaptation via Concise Propagation-Transformation PipelineJiayi Wang, Yi Li 0018, Xin Zheng 0008, Junyang Chen 0001, Yanqing Guo, Alan Wee-Chung Liew, Shirui Pan. WWW 2026: 442-451 [doi]

Graph-to-Tree: Topological Decomposition for Self-Supervised LearningYejiang Wang, Yuhai Zhao, Fangting Li, Jiapu Wang, Meixia Wang, Ling Li, Miaomiao Huang, Zhengkui Wang, Shirui Pan. WWW 2026: 891-900 [doi]

CIA: Inferring the Communication Topology from LLM-based Multi-Agent SystemsYongxuan Wu, Xixun Lin, He Zhang 0012, Nan Sun, Kun Wang 0056, Chuan Zhou 0001, Shirui Pan, Yanan Cao 0001. acl 2026: 17917-17933 [doi]

A Survey on Diffusion Models for Time Series and Spatio-Temporal DataYiyuan Yang, Ming Jin 0005, Haomin Wen, Chaoli Zhang 0001, Yuxuan Liang 0002, Lintao Ma, Yi Wang 0022, Chenghao Liu, Bin Yang 0002, Zenglin Xu, Shirui Pan, Qingsong Wen. ACM Comput. Surv., 58(8), June 2026. [doi]

DA-MoE: Addressing depth-sensitivity in graph-level analysis through mixture of expertsZelin Yao, Mukun Chen, Chuang Liu 0008, Xianke Meng, Yibing Zhan, Jia Wu 0001, Shirui Pan, Huiting Xu, Wenbin Hu 0001. NN, 194:108064, 2026. [doi]

Graph Stochastic Neural Process for Inductive Few-shot Knowledge Graph CompletionZiCheng Zhao, Linhao Luo, Shirui Pan, Chengqi Zhang, Chen Gong 0002. tist, 17(1), February 2026. [doi]

2025

Transforming Urban Dynamics: Harnessing Large Language Models for Smarter MobilityHao Xue 0001, Ming Jin 0005, Shirui Pan, Flora Salim. expert, 40(2):5-7, March - April 2025. [doi]

Graph Convolutional Multi-Label Hashing for Cross-Modal RetrievalXiaobo Shen 0001, Yinfan Chen, Weiwei Liu 0003, Yuhui Zheng, Quan-Sen Sun, Shirui Pan. tnn, 36(5):7997-8009, May 2025. [doi]

Open-Set Cross-Network Node Classification via Unknown-Excluded Adversarial Graph Domain AlignmentXiao Shen 0001, Zhihao Chen, Shirui Pan, Shuang Zhou 0012, Laurence T. Yang, Xi Zhou. AAAI 2025: 20398-20408 [doi]

Foundation Models for Spatio-Temporal Data Science: A Tutorial and SurveyYuxuan Liang 0002, Haomin Wen, Yutong Xia, Ming Jin 0005, Bin Yang 0002, Flora Salim, Qingsong Wen, Shirui Pan, Gao Cong. kdd 2025: 6063-6073 [doi]

A Survey on Unifying Large Language Models and Knowledge Graphs for Biomedicine and HealthcareRan Xu 0002, Patrick Jiang, Linhao Luo, Cao Xiao, Adam Cross, Shirui Pan, Jimeng Sun 0001, Carl Yang 0001. kdd 2025: 6195-6205 [doi]

Balancing user preferences by social networks: A condition-guided social recommendation model for mitigating popularity biasXin He 0003, Wenqi Fan, Ruobing Wang 0003, Yili Wang 0004, Ying Wang 0009, Shirui Pan, Xin Wang 0035. NN, 187:107317, 2025. [doi]

Unifying Unsupervised Graph-Level Anomaly Detection and Out-of-Distribution Detection: A BenchmarkYili Wang 0004, Yixin Liu 0001, Xu Shen 0002, Chenyu Li, Rui Miao 0003, Kaize Ding, Ying Wang 0009, Shirui Pan, Xin Wang 0035. iclr 2025: [doi]

Towards Expressive Spectral-Temporal Graph Neural Networks for Time Series ForecastingMing Jin 0005, Guangsi Shi, Yuan-Fang Li, Bo Xiong, Tian Zhou 0004, Flora D. Salim, Liang Zhao 0002, Lingfei Wu 0001, Qingsong Wen, Shirui Pan. pami, 47(6):4926-4939, June 2025. [doi]

The Workshop of Artificial Intelligence for Web-Centric Time Series Analysis (AI4TS): Theory, Algorithms, and ApplicationsMing Jin 0005, Mahsa Salehi, Yuxuan Liang, Dongjin Song, Flora Salim, Min Wu, Shirui Pan, Qingsong Wen. WWW 2025: 2203-2206 [doi]

TED++: Submanifold-Aware Backdoor Detection via Layerwise Tubular-Neighbourhood ScreeningNam Le 0006, Leo Yu Zhang, Kewen Liao, Shirui Pan, Wei Luo 0001. icdm 2025: 1350-1359 [doi]

The Rise of Small Language ModelsQin Zhang 0011, Ziqi Liu, Shirui Pan. expert, 40(1):30-37, January - February 2025. [doi]

TGLsta: Low-resource Textual Graph Learning with Semantic and Topological Awareness via LLMsQin Zhang 0011, Xiaowei Li, Ziqi Liu, Xiaochen Fan, Xiaojun Chen 0006, Shirui Pan. AAAI 2025: 22506-22514 [doi]

Multi-Modal Multi-Kernel Graph Learning for Autism Prediction and Biomarker DiscoveryJin Liu 0012, Junbin Mao, Hanhe Lin, Hulin Kuang, Shirui Pan, Xusheng Wu, Shan Xie, Fei Liu, Yi Pan 0001. tcbb, 22(2):842-854, 2025. [doi]

Personalized Multi-Interest Modeling for Cross-Domain Recommendation to Cold-Start UsersXiaodong Li 0012, Jiawei Sheng, Jiangxia Cao, Xinghua Zhang 0001, Wenyuan Zhang 0002, Yong Sun, Shirui Pan, Zhihong Tian, Tingwen Liu. icde 2025: 4092-4105 [doi]

Test-Time GNN Model Evaluation on Dynamic GraphsBo Li 0042, Xin Zheng 0008, Ming Jin 0005, Can Wang 0004, Shirui Pan. icdm 2025: 437-446 [doi]

Revisiting Edge Perturbation for Graph Neural Network in Graph Data Augmentation and AttackXin Liu 0073, Yuxiang Zhang, Meng Wu 0006, Mingyu Yan, Kun He, Wei Yan, Shirui Pan, Xiaochun Ye, Dongrui Fan. tkde, 37(7):4225-4238, July 2025. [doi]

DropNaE: Alleviating irregularity for large-scale graph representation learningXin Liu 0073, Xunbin Xiong, Mingyu Yan, Runzhen Xue, Shirui Pan, Songwen Pei, Lei Deng 0003, Xiaochun Ye, Dongrui Fan. NN, 183:106930, 2025. [doi]

Sharpness-aware Zeroth-order Optimization for Graph TransformersYang Liu 0320, Chuan Zhou 0001, Yuhan Lin, Shuai Zhang, Yang Gao 0024, Zhao Li 0007, Shirui Pan. IJCAI 2025: 3126-3134 [doi]

Uncertainty-Aware Graph Neural Networks: A Multihop Evidence Fusion ApproachQingfeng Chen, Shiyuan Li, Yixin Liu 0001, Shirui Pan, Geoffrey I. Webb, Shichao Zhang 0001. tnn, 36(10):18463-18477, October 2025. [doi]

Unified Knowledge-Guided Molecular Graph Encoder with multimodal fusion and multi-task learningMukun Chen, Xiuwen Gong, Shirui Pan, Jia Wu 0001, Fu Lin, Bo Du 0001, Wenbin Hu 0001. NN, 184:107068, 2025. [doi]

Knowledge-aware contrastive heterogeneous molecular graph learningMukun Chen, Jia Wu 0001, Shirui Pan, Fu Lin, Bo Du 0001, Xiuwen Gong, Wenbin Hu 0001. ploscb, 21(5):1013008, 2025. [doi]

Multi-view contrastive learning with Static attributes and Dynamic interests for Sequential RecommendationMukun Chen, Jia Wu 0001, Shirui Pan, Xiantao Cai, Bo Du 0001, Wenbin Hu 0001, Huiting Xu. apin, 55(14):955, September 2025. [doi]

Deep Learning for Time Series Anomaly Detection: A SurveyZahra Zamanzadeh Darban, Geoffrey I. Webb, Shirui Pan, Charu Aggarwal 0001, Mahsa Salehi. ACM Comput. Surv., 57(1), January 2025. [doi]

DACAD: Domain Adaptation Contrastive Learning for Anomaly Detection in Multivariate Time SeriesZahra Zamanzadeh Darban, Yiyuan Yang, Geoffrey I. Webb, Charu C. Aggarwal, Qingsong Wen, Shirui Pan, Mahsa Salehi. tkde, 37(8):4485-4496, August 2025. [doi]

CARLA: Self-supervised contrastive representation learning for time series anomaly detectionZahra Zamanzadeh Darban, Geoffrey I. Webb, Shirui Pan, Charu C. Aggarwal, Mahsa Salehi. PR, 157:110874, 2025. [doi]

Spatiotemporal Pretrained Large Language Model for Forecasting With Missing ValuesLe Fang, Wei Xiang 0001, Shirui Pan, Flora D. Salim, Yi-Ping Phoebe Chen. iotj, 12(10):13838-13850, may15 2025. [doi]

Less is More: Federated Graph Learning with Alleviating Topology Heterogeneity from A Causal PerspectiveLele Fu, Bowen Deng 0002, Sheng Huang, Tianchi Liao, Shirui Pan, Chuan Chen 0001. icml 2025: [doi]

T2S: High-resolution Time Series Generation with Text-to-Series Diffusion ModelsYunfeng Ge, Jiawei Li 0017, Yiji Zhao, Haomin Wen, Zhao Li 0007, Meikang Qiu, Hongyan Li, Ming Jin 0005, Shirui Pan. IJCAI 2025: 5208-5216 [doi]

Not All Edges are Equally Robust: Evaluating the Robustness of Ranking-Based Federated LearningZirui Gong, Yanjun Zhang, Leo Yu Zhang, Zhaoxi Zhang, Yong Xiang 0001, Shirui Pan. sp 2025: 2527-2545 [doi]

Transfer learning in agriculture: a reviewMd Ismail Hossen, Mohammad Awrangjeb, Shirui Pan, Abdullah Al Mamun. air, 58(4):97, April 2025. [doi]

FDR-CultivarNet: Feature Decomposition and Reconstruction Network for Few-Shot Cultivar Leaf ClassificationMd Ismail Hossen, Mohammad Aminul Islam, Mohammad Awrangjeb, Shirui Pan. dicta 2025: 1-8 [doi]

TimeFilter: Patch-Specific Spatial-Temporal Graph Filtration for Time Series ForecastingYifan Hu, Guibin Zhang, Peiyuan Liu, Disen Lan, Naiqi Li, Dawei Cheng, Tao Dai 0001, Shu-Tao Xia, Shirui Pan. icml 2025: [doi]

Interactive Graph Learning for Multilevel Network AlignmentPengfei Jiao, Yuanqi Liu, YingHui Wang, Huijun Tang, Zhidong Zhao, Shirui Pan. tnn, 36(11):19924-19938, November 2025. [doi]

SpecG: A Spectral-Based Framework for Effective Graph Pretraining and Knowledge TransferZizhe Jin, Yizhen Zheng, Linhao Luo, Yixin Liu 0001, Xin Zheng, Xuefei Yin, Vincent Lee, Shirui Pan. pakdd 2025: 224-236 [doi]

M^2LLM: Multi-view Molecular Representation Learning with Large Language ModelsJiaxin Ju, Yizhen Zheng, Huan Yee Koh, Can Wang 0004, Shirui Pan. IJCAI 2025: 7437-7445 [doi]

Uni-MRL: Unified MultiModal Molecular Representation Learning with Large Language Models and Graph Neural NetworksJiaxin Ju, Yizhen Zheng, Huan Yee Koh, Shirui Pan. pakdd 2025: 275-287 [doi]

Contrastive Clustering Learning for Multi-Behavior RecommendationWei Lan, Guoxian Zhou, Qingfeng Chen, Wenguang Wang, Shirui Pan, Yi Pan 0001, Shichao Zhang 0001. tois, 43(1), January 2025. [doi]

MVSF-AB: accurate antibody-antigen binding affinity prediction via multi-view sequence feature learningMinghui Li, Yao Shi, Shengqing Hu, Shengshan Hu, Peijin Guo, Wei Wan, Leo Yu Zhang, Shirui Pan, Jizhou Li, Lichao Sun 0001, Xiaoli Lan. bioinformatics, 41(5), 2025. [doi]

DyG-Mamba: Continuous State Space Modeling on Dynamic GraphsDongyuan Li, Shiyin Tan, Ying Zhang 0065, Ming Jin 0005, Shirui Pan, Manabu Okumura, Renhe Jiang. nips 2025: [doi]

Graph positive-unlabeled learning via Bootstrapping Label DisambiguationChunquan Liang, Luyue Wang, Xinyuan Feng, Yuying Cheng, Mei Li, Shirui Pan, Hongming Zhang 0002. NN, 190:107630, 2025. [doi]

GatorCLR: Personalized predictions of patient outcomes on electronic health records using self-supervised contrastive graph representationYuxi Liu, Zhenhao Zhang, Jiacong Mi, Shirui Pan, Tianlong Chen 0001, Yi Guo 0005, Xing He 0003, Jiang Bian 0001. jbi, 168:104851, 2025. [doi]

Enhancing Large Language Model for Knowledge Graph Completion via Structure-Aware Alignment-TuningYu Liu, Yanan Cao, Xixun Lin, Yanmin Shang, Shi Wang 0002, Shirui Pan. emnlp 2025: 20970-20984 [doi]

ChatRule: Mining Logical Rules with Large Language Models for Knowledge Graph ReasoningLinhao Luo, Jiaxin Ju, Bo Xiong, Yuan-Fang Li, Gholamreza Haffari, Shirui Pan. pakdd 2025: 314-325 [doi]

Graph-constrained Reasoning: Faithful Reasoning on Knowledge Graphs with Large Language ModelsLinhao Luo, ZiCheng Zhao, Gholamreza Haffari, Yuan-Fang Li, Chen Gong 0002, Shirui Pan. icml 2025: [doi]

GFM-RAG: Graph Foundation Model for Retrieval Augmented GenerationLinhao Luo, ZiCheng Zhao, Reza Haffari, Dinh Phung 0001, Chen Gong 0002, Shirui Pan. nips 2025: [doi]

A Robust Co-Training Framework to Handle Noisy Labels for Remote Sensing Image SegmentationMitsuyoshi Otsu, Jun Zhou 0001, Bo Han 0003, Arnon Accad, Shirui Pan. tgrs, 63:1-14, 2025. [doi]

Knowledge Graphs and Pretrained Language Models Enhanced Representation Learning for Conversational Recommender SystemsZhangchi Qiu, Ye Tao 0004, Shirui Pan, Alan Wee-Chung Liew. tnn, 36(4):6107-6121, April 2025. [doi]

Reasoning Over User Preferences: Knowledge Graph-Augmented LLMs for Explainable Conversational RecommendationsZhangchi Qiu, Linhao Luo, Shirui Pan, Alan Wee-Chung Liew. icdm 2025: 1495-1504 [doi]

Graph Retrieval-Augmented LLM for Conversational Recommendation SystemsZhangchi Qiu, Linhao Luo, ZiCheng Zhao, Shirui Pan, Alan Wee-Chung Liew. pakdd 2025: 344-355 [doi]

Adversarial Contrastive Graph Masked AutoEncoder Against Graph Structure and Feature Dual AttacksWeixuan Shen, Xiaobo Shen 0001, Shirui Pan. AAAI 2025: 12515-12523 [doi]

LLM-powered explanations: Unraveling recommendations through subgraph reasoningGuangsi Shi, Xiaofeng Deng, Linhao Luo, Lijuan Xia, Lei Bao, Bei Ye, Fei Du, Shirui Pan, Yuxiao Li 0003. kbs, 329:114307, 2025. [doi]

Dual variational graph contrastive learning for social recommendationYifan Wang, Fei Xiong, Zhiyuan Zhang 0003, Shirui Pan, Liang Wang 0017, Hongshu Chen. kbs, 327:114132, 2025. [doi]

Equivalence is All: A Unified View for Self-supervised Graph LearningYejiang Wang, Yuhai Zhao, Zhengkui Wang, Ling Li, Jiapu Wang, Fangting Li, Miaomiao Huang, Shirui Pan, Xingwei Wang 0001. icml 2025: [doi]

Extracting Private Training Data in Federated Learning From ClientsJiaheng Wei, Yanjun Zhang, Leo Yu Zhang, Chao Chen 0015, Shirui Pan, Kok-Leong Ong, Jun Zhang 0010, Yang Xiang 0001. tifs, 20:4525-4540, 2025. [doi]

Nonlinear Matrix Factorization With Cognitive Opinion Formation for Social RecommendationFei Xiong, Xuelian Ni, Shirui Pan, Hongshu Chen, Liang Wang 0017, Zheng Yan 0001. tsmc, 55(3):1870-1885, March 2025. [doi]

Robust Graph Based Social Recommendation Through Contrastive Multi-View LearningFei Xiong, Tao Zhang, Shirui Pan, Guixun Luo, Liang Wang 0017. AAAI 2025: 12890-12898 [doi]

Towards Neural Scaling Laws for Time Series Foundation ModelsQingren Yao, Chao-Han Huck Yang, Renhe Jiang, Yuxuan Liang, Ming Jin 0005, Shirui Pan. iclr 2025: [doi]

Conformal Anomaly Detection in Event SequencesShuai Zhang, Chuan Zhou 0001, Yang Liu 0320, Peng Zhang 0001, Xixun Lin, Shirui Pan. icml 2025: [doi]

Graph Sparsification via Mixture of GraphsGuibin Zhang, Xiangguo Sun, Yanwei Yue, Chonghe Jiang, Kun Wang, Tianlong Chen, Shirui Pan. iclr 2025: [doi]

Large language models for scientific discovery in molecular property predictionYizhen Zheng, Huan Yee Koh, Jiaxin Ju, Anh T. N. Nguyen, Lauren T. May, Geoffrey I. Webb, Shirui Pan. natmi, 7(3):437-447, 2025. [doi]

Large language models for drug discovery and developmentYizhen Zheng, Huan Yee Koh, Jiaxin Ju, Madeleine Yang, Lauren T. May, Geoffrey I. Webb, Li Li, Shirui Pan, George Church. patterns, 6(10):101346, 2025. [doi]

Efficient and Diverse De Novo Protein Backbone Design with SE(3)-Equivariant DiffusionRuipeng Zhou, Ming Yang, Yi Li 0008, Xin Zheng, Alan Wee-Chung Liew, Shirui Pan, Yanqing Guo. pakdd 2025: 408-420 [doi]

RHGNN: imposing relational inductive bias for heterogeneous graph neural networkShichao Zhu, Shuai Zhang, Yang Liu, Chuan Zhou 0001, Shirui Pan, Zhao Li 0007, Hongyang Chen. mlc, 16(2):855-871, February 2025. [doi]

Progressive Prefix-Memory Tuning for Complex Logical Query Answering on Knowledge GraphsXingrui Zhuo, Shirui Pan, Jiapu Wang, Gongqing Wu, Zan Zhang 0002, Rui Li, Zizhong Wei, Xindong Wu 0001. IJCAI 2025: 3716-3724 [doi]

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