Journal: Bioinformatics

Volume 13, Issue 4

325 -- 332William R. Pearson. Identifying distantly related protein sequences
333 -- 344David B. Searls. Linguistic approaches to biological sequences
345 -- 356Burkhard Rost, Seán I. O Donoghue. Sisyphus and prediction of protein structure
357 -- 364Tatsuya Akutsu, Kentaro Onizuka, Masato Ishikawa. Rapid protein fragment search using hash functions based on the Fourier transform
365 -- 376Steven Salzberg. A method for identifying splice sites and translational start sites in eukaryotic mRNA
377 -- 385J. H. Hofmeyr, A. Cornish-Bowden. The reversible Hill equation: how to incorporate cooperative enzymes into metabolic models
387 -- 396Hiroyuki Toh. Introduction of a distance cut-off into structural alignment by the double dynamic programming algorithm
397 -- 406William Noble Grundy, Timothy L. Bailey, Charles Elkan, Michael E. Baker. Meta-MEME: motif-based hidden Markov models of protein families
407 -- 413P. Durand, L. Canard, J. P. Mornon. Visual BLAST and visual FASTA: graphic workbenches for interactive analysis of full BLAST and FASTA outputs under Microsoft Windows 95/NT
415 -- 424M. Ito, Y. Matsuo, Ken Nishikawa. Prediction of protein secondary structure using the 3D-1D compatibility algorithm
425 -- 430R. W. Hooft, Chris Sander, Gert Vriend. Objectively judging the quality of a protein structure from a Ramachandran plot
431 -- 438V. Biaudet, Franck Samson, Philippe Bessières. Micado - a network-oriented database for microbial genomes
439 -- 444S. Lay, D. Bray. A computer program for the analysis of protein complex formation
445 -- 451J. Schafer, M. Schoniger. DISTREE: a tool for estimating genetic distances between aligned DNA sequences
453 -- 457R. W. Gill, T. Charles Hodgman, C. B. Littler, M. D. Oxer, D. S. Montgomery, S. Taylor, P. Sanseau. A new dynamic tool to perform assembly of expressed sequence tags (ESTs)
459 -- 471Bruce A. Shapiro, Jin Chu Wu. Predicting RNA H-type pseudoknots with the massively parallel genetic algorithm
473 -- 474Ross D. King, Mansoor A. S. Saqi, Roger A. Sayle, Michael J. E. Sternberg. DSC: public domain protein secondary structure predication
475 -- 476L. I. Toldo. JaMBW 1.1: Java-based Molecular Biologists Workbench
477 -- 478Richard Mott. EST_GENOME: a program to align spliced DNA sequences to unspliced genomic DNA
481 -- 483Miguel A. Andrade, Georg Casari, Antoine de Daruvar, Chris Sander, Reinhard Schneider, Javier Tamames, Alfonso Valencia, Christos A. Ouzounis. Sequence analysis of the Methanococcus jannaschii genome and the prediction of protein function
485 -- 486E. Lorenz, S. Leeton, R. J. Owen. A simple method for sizing large fragments of bacterial DNA separated by PFGE