Journal: Bioinformatics

Volume 19, Issue 17

2167 -- 2170Alexander E. Vinogradov. Silent DNA: speaking RNA language?
2171 -- 2175Mario Albrecht, Thomas Lengauer, Stefan Schreiber. Disease-associated variants in PYPAF1 and NOD2 result in similar alterations of conserved sequence
2176 -- 2190Christos A. Ouzounis, Alfonso Valencia. Early bioinformatics: the birth of a discipline - a personal view
2191 -- 2198Vincent Thareau, Patrice Déhais, Carine Serizet, Pierre Hilson, Pierre Rouzé, Sébastien Aubourg. Automatic design of gene-specific sequence tags for genome-wide functional studies
2199 -- 2209Vidhya Gomathi Krishnan, David R. Westhead. A comparative study of machine-learning methods to predict the effects of single nucleotide polymorphisms on protein function
2210 -- 2211Junbai Wang, Ola Myklebost, Eivind Hovig. MGraph: graphical models for microarray data analysis
2212 -- 2224Anders Wallqvist, Alfred A. Rabow, Robert H. Shoemaker, Edward A. Sausville, David G. Covell. Linking the growth inhibition response from the National Cancer Institute s anticancer screen to gene expression levels and other molecular target data
2225 -- 2236Ivan Erill, Marcos Escribano, Susana Campoy, Jordi Barbé. In silico analysis reveals substantial variability in the gene contents of the gamma proteobacteria LexA-regulon
2237 -- 2245Lusheng Wang, Jianyun Zhao. Parametric alignment of ordered trees
2246 -- 2253Shirish Krishnaj Shevade, S. Sathiya Keerthi. A simple and efficient algorithm for gene selection using sparse logistic regression
2254 -- 2262Peter J. Giles, David Kipling. Normality of oligonucleotide microarray data and implications for parametric statistical analyses
2263 -- 2270Irini A. Doytchinova, Darren R. Flower. Towards the in silico identification of class II restricted T-cell epitopes: a partial least squares iterative self-consistent algorithm for affinity prediction
2271 -- 2282Dirk Husmeier. Sensitivity and specificity of inferring genetic regulatory interactions from microarray experiments with dynamic Bayesian networks
2283 -- 2293Anthony L. Duran, Jian Yang, Liangjiang Wang, Lloyd W. Sumner. Metabolomics spectral formatting, alignment and conversion tools (MSFACTs)
2294 -- 2301Yuna Hou, Wynne Hsu, Mong-Li Lee, Chris Bystroff. Efficient remote homology detection using local structure
2302 -- 2307Xiaobo Zhou, Xiaodong Wang, Edward R. Dougherty. Missing-value estimation using linear and non-linear regression with Bayesian gene selection
2308 -- 2310Thomas Hamelryck, Bernard Manderick. PDB file parser and structure class implemented in Python
2311 -- 2312Yanming Yang, Li M. Fu. TSGDB: a database system for tumor suppressor genes
2313 -- 2315Kim Carter, Matthew I. Bellgard. MASV - Multiple (BLAST) Annotation System Viewer
2319 -- 2320Mads Wichmann Matthiessen. BioWareDB: the biomedical software and database search engine
2321 -- 2322Gabriel S. Eichler, Sui Huang, Donald E. Ingber. Gene Expression Dynamics Inspector (GEDI): for integrative analysis of expression profiles
2323 -- 2324Hao Wang, Beng Chin Ooi, Kian-Lee Tan, Twee-Hee Ong, Lei Zhou. BLAST++: BLASTing queries in batches
2325 -- 2327Kevin Thornton. libsequence: a C++ class library for evolutionary genetic analysis
2328 -- 2329Jorge García de la Nava, Sacha A. F. T. van Hijum, Oswaldo Trelles. PreP: gene expression data pre-processing
2332 -- 2333Carsten O. Daub, Sebastian Kloska, Joachim Selbig. MetaGeneAlyse: analysis of integrated transcriptional and metabolite data