| 2803 | -- | 2804 | Kevin Dobbin, Joanna H. Shih, Richard Simon. Comment on Evaluation of the gene-specific dye bias in cDNA microarray experiments |
| 2805 | -- | 2811 | Vivek Anantharaman, L. Aravind. MEDS and PocR are novel domains with a predicted role in sensing simple hydrocarbon derivatives in prokaryotic signal transduction systems |
| 2812 | -- | 2813 | Alan M. Durham, André Y. Kashiwabara, Fernando T. G. Matsunaga, Paulo H. Ahagon, Flávia Rainone, Leonardo Varuzza, Arthur Gruber. EGene: a configurable pipeline generation system for automated sequence analysis |
| 2814 | -- | 2820 | Rachel Karchin, Mark Diekhans, Libusha Kelly, Daryl J. Thomas, Ursula Pieper, Narayanan Eswar, David Haussler, Andrej Sali. LS-SNP: large-scale annotation of coding non-synonymous SNPs based on multiple information sources |
| 2821 | -- | 2826 | B. Anand, V. S. Gowri, Narayanaswamy Srinivasan. Use of multiple profiles corresponding to a sequence alignment enables effective detection of remote homologues |
| 2827 | -- | 2831 | Aleksandar Poleksic, Joseph F. Danzer, Kevin Hambly, Derek A. Debe. Convergent Island Statistics: a fast method for determining local alignment score significance |
| 2832 | -- | 2838 | Guoying Qi, Richard A. Lee, Steven Hayward. A comprehensive and non-redundant database of protein domain movements |
| 2839 | -- | 2843 | Geraint Thomas, Richard B. Sessions, Martin J. Parker. Density guided importance sampling: application to a reduced model of protein folding |
| 2844 | -- | 2849 | Jaehyun Sim, Seung-Yeon Kim, Julian Lee. Prediction of protein solvent accessibility using fuzzy k-nearest neighbor method |
| 2850 | -- | 2855 | A. Selim Aytuna, Attila Gürsoy, Ozlem Keskin. Prediction of protein-protein interactions by combining structure and sequence conservation in protein interfaces |
| 2856 | -- | 2860 | Daniele Varrazzo, Andrea Bernini, Ottavia Spiga, Arianna Ciutti, Stefano Chiellini, Vincenzo Venditti, Luisa Bracci, Neri Niccolai. Three-dimensional computation of atom depth in complex molecular structures |
| 2861 | -- | 2866 | Dung-Tsa Chen, James J. Chen, Seng-jaw Soong. Probe rank approaches for gene selection in oligonucleotide arrays with a small number of replicates |
| 2867 | -- | 2874 | Albert M. Levin, Debashis Ghosh, Kathleen R. Cho, Sharon L. R. Kardia. A model-based scan statistic for identifying extreme chromosomal regions of gene expression in human tumors |
| 2875 | -- | 2882 | Qunhua Li, Chris Fraley, Roger Eugene Bumgarner, Ka Yee Yeung, Adrian E. Raftery. Donuts, scratches and blanks: robust model-based segmentation of microarray images |
| 2883 | -- | 2890 | Kuang-Chi Chen, Tse-Yi Wang, Huei-Hun Tseng, Chi-Ying F. Huang, Cheng-Yan Kao. A stochastic differential equation model for quantifying transcriptional regulatory network in ::::Saccharomyces cerevisiae:::: |
| 2891 | -- | 2897 | Francesco Pappalardo, Pierluigi Lollini, Filippo Castiglione, Santo Motta. Modeling and simulation of cancer immunoprevention vaccine |
| 2898 | -- | 2905 | Lawrence Cabusora, Electra Sutton, Andy W. Fulmer, Christian V. Forst. Differential network expression during drug and stress response |
| 2906 | -- | 2908 | Florence Armand, Philipp Bucher, C. Victor Jongeneel, Edward E. Farmer. Rapid and selective surveillance of Arabidopsis thaliana genome annotations with Centrifuge |
| 2909 | -- | 2911 | Dongsheng Che, Shane T. Jensen, Liming Cai, Jun S. Liu. BEST: Binding-site Estimation Suite of Tools |
| 2912 | -- | 2913 | Benjamin Schuster-Böckler, Alex Bateman. Visualizing profile-profile alignment: pairwise HMM logos |
| 2914 | -- | 2916 | Adrian A. Canutescu, Roland L. Dunbrack Jr.. MollDE: a homology modeling framework you can click with |
| 2917 | -- | 2920 | Harpreet Kaur Saini, Daniel Fischer. Meta-DP: domain prediction meta-server |
| 2921 | -- | 2922 | Stefanie Scheid, Rainer Spang. twilight; a Bioconductor package for estimating the local false discovery rate |
| 2923 | -- | 2924 | Johan Hattne, David Fange, Johan Elf. Stochastic reaction-diffusion simulation with MesoRD |
| 2925 | -- | 2926 | Yu Zheng, Daiwen Yang. STARS: statistics on inter-atomic distances and torsion angles in protein secondary structures |
| 2927 | -- | 2929 | Chunhong Mao, Jing Qiu, Chunxia Wang, Trevor C. Charles, Bruno W. S. Sobral. NodMutDB: a database for genes and mutants involved in symbiosis |
| 2930 | -- | 2931 | Eain C. J. Green, Georgios V. Gkoutos, Heena V. Lad, Andrew Blake, Joseph Weekes, John M. Hancock. EMPReSS: European Mouse Phenotyping Resource for Standardized Screens |