| 3065 | -- | 0 | Marie-Laure Martin-Magniette, Julie Aubert, Eric Cabannes, Jean-Jacques Daudin. Answer to the comments of K. Dobbin, J. Shih and R. Simon on the paper Evaluation of the gene-specific dye-bias in cDNA microarray experiments |
| 3066 | -- | 3073 | Neal O. Jeffries. Algorithms for alignment of mass spectrometry proteomic data |
| 3074 | -- | 3081 | Weixiong Zhang, Jianhua Ruan, Tuan-hua David Ho, Youngsook You, Taotao Yu, Ralph S. Quatrano. ::::Cis::::-regulatory element based targeted gene finding: genome-wide identification of abscisic acid- and abiotic stress-responsive genes in ::::Arabidopsis thaliana:::: |
| 3082 | -- | 3088 | Rainer Pudimat, Ernst Günter Schukat-Talamazzini, Rolf Backofen. A multiple-feature framework for modelling and predicting transcription factor binding sites |
| 3089 | -- | 3096 | Carol Ecale Zhou, Adam Zemla, Diana C. Roe, Malin Young, Marisa Lam, Joseph S. Schoeniger, Rod Balhorn. Computational approaches for identification of conserved/unique binding pockets in the A chain of ricin |
| 3097 | -- | 3104 | Sin-Ho Jung. Sample size for FDR-control in microarray data analysis |
| 3105 | -- | 3113 | Yan Lu, Peng-Yuan Liu, Peng Xiao, Hong-Wen Deng. Hotelling s ::::T::::::2:: multivariate profiling for detecting differential expression in microarrays |
| 3114 | -- | 3121 | Peng Qiu, Z. Jane Wang, K. J. Ray Liu. Ensemble dependence model for classification and prediction of cancer and normal gene expression data |
| 3122 | -- | 3130 | Katechan Jampachaisri, Lea Valinsky, James Borneman, S. James Press. Classification of oligonucleotide fingerprints: application for microbial community and gene expression analyses |
| 3131 | -- | 3137 | Simon Rogers, Mark Girolami. A Bayesian regression approach to the inference of regulatory networks from gene expression data |
| 3138 | -- | 3145 | Pierre Geurts, Marianne Fillet, Dominique de Seny, Marie-Alice Meuwis, Michel Malaise, Marie-Paule Merville, Louis Wehenkel. Proteomic mass spectra classification using decision tree based ensemble methods |
| 3146 | -- | 3154 | Tsutomu Matsunaga, Masaaki Muramatsu. Knowledge-based computational search for genes associated with the metabolic syndrome |
| 3155 | -- | 3163 | Konstantinos Karasavvas, Richard A. Baldock, Albert Burger. A criticality-based framework for task composition in multi-agent bioinformatics integration systems |
| 3164 | -- | 3165 | . TAMO: a flexible, object-oriented framework for analyzing transcriptional regulation using DNA-sequence motifs |
| 3166 | -- | 3167 | Olivier Pible, Gilles Imbert, Jean-Luc Pellequer. INTERALIGN: interactive alignment editor for distantly related protein sequences |
| 3168 | -- | 3170 | Sebastian Zöllner, Xiaoquan Wen, Jonathan K. Pritchard. Association mapping and fine mapping with TreeLD |
| 3171 | -- | 3173 | Yoon-Seong Jeon, Hwanwon Chung, Sunyoung Park, Inae Hur, Jae-Hak Lee, Jongsik Chun. jPHYDIT: a JAVA-based integrated environment for molecular phylogeny of ribosomal RNA sequences |
| 3176 | -- | 3178 | Carles Ferrer-Costa, Josep Lluis Gelpí, Leire Zamakola, Ivan Parraga, Xavier de la Cruz, Modesto Orozco. PMUT: a web-based tool for the annotation of pathological mutations on proteins |
| 3179 | -- | 3180 | Dominik Gront, Andrzej Kolinski. HCPM - program for hierarchical clustering of protein models |
| 3181 | -- | 3182 | Sergi Vives, Bradford Loucas, Mariel Vázquez, David J. Brenner, Rainer K. Sachs, Lynn Hlatky, Michael Cornforth, Javier Arsuaga. SCHIP: statistics for chromosome interphase positioning based on interchange data |
| 3183 | -- | 3184 | M. Obreiter, C. Fischer, J. Chang-Claude, L. Beckmann. SDMinP: a program to control the family wise error rate using step-down minP adjusted ::::P::::-values |
| 3185 | -- | 3186 | Nathalie Pochet, Frizo A. L. Janssens, Frank De Smet, Kathleen Marchal, Johan A. K. Suykens, Bart De Moor. M@CBETH: a microarray classification benchmarking tool |
| 3187 | -- | 3188 | Alun Thomas. GMCheck: Bayesian error checking for pedigreegenotypes and phenotypes |
| 3189 | -- | 3190 | Mingyi Liu, Andrei Grigoriev. Fast parsers for Entrez Gene |
| 3191 | -- | 3192 | Burr Settles. ABNER: an open source tool for automatically tagging genes, proteins and other entity names in text |
| 3193 | -- | 3194 | Mark A. van de Wiel, Serge J. Smeets, Ruud H. Brakenhoff, Bauke Ylstra. CGHMultiArray: exact P-values for multi-array comparative genomic hybridization data |
| 3195 | -- | 3197 | Thorsten Henrich, Mirana Ramialison, Beate Wittbrodt, Beatrice Assouline, Franck Bourrat, Anja Berger, Heinz Himmelbauer, Takashi Sasaki, Nobuyoshi Shimizu, Monte Westerfield, Hisato Kondoh, Joachim Wittbrodt. MEPD: a resource for medaka gene expression patterns |
| 3198 | -- | 3199 | Philip Jones, Nisha Vinod, Thomas Down, Andre Hackmann, Andreas Kähäri, Ernst Kretschmann, Antony F. Quinn, Daniela Wieser, Henning Hermjakob, Rolf Apweiler. Dasty and UniProt DAS: a perfect pair for protein feature visualization |