Journal: Bioinformatics

Volume 24, Issue 11

1325 -- 1331Sridhar Hannenhalli. Eukaryotic transcription factor binding sites - modeling and integrative search methods
1332 -- 1338Daniel Dalevi, Niklas Eriksen. Expected gene-order distances and model selection in bacteria
1339 -- 1343Marianne M. Lee, Michael K. Chan, Ralf Bundschuh. Simple is beautiful: a straightforward approach to improve the delineation of true and false positives in PSI-BLAST searches
1344 -- 1348Takashi Ishida, Kengo Kinoshita. Prediction of disordered regions in proteins based on the meta approach
1349 -- 1358Chunqi Chang, Zhi Ding, Yeung Sam Hung, Peter Chin Wan Fung. Fast network component analysis (FastNCA) for gene regulatory network reconstruction from microarray data
1359 -- 1366Anindya Bhattacharya, Rajat K. De. Divisive Correlation Clustering Algorithm (DCCA) for grouping of genes: detecting varying patterns in expression profiles
1367 -- 1373Haiyun Wang, Qi Wang, Xia Li, Bairong Shen, Min Ding, Ziyin Shen. Towards patterns tree of gene coexpression in eukaryotic species
1374 -- 1380Daniele Santoni, Marco Pedicini, Filippo Castiglione. Implementation of a regulatory gene network to simulate the TH1/2 differentiation in an agent-based model of hypersensitivity reactions
1381 -- 1385Jonathan D. Wren. URL decay in MEDLINE - a 4-year follow-up study
1386 -- 1393Michael Hackenberg, Rune Matthiesen. Annotation-Modules: a tool for finding significant combinations of multisource annotations for gene lists
1394 -- 1396William Ritchie, François-Xavier Théodule, Daniel Gautheret. Mireval: a web tool for simple microRNA prediction in genome sequences
1397 -- 1398Claus Lundegaard, Ole Lund, Morten Nielsen. Accurate approximation method for prediction of class I MHC affinities for peptides of length 8, 10 and 11 using prediction tools trained on 9mers
1399 -- 1400Frédéric Schütz, Mauro Delorenzi. MAMOT: hidden Markov modeling tool
1401 -- 1402Lixiao Wang, Uwe H. Sauer. OnD-CRF: predicting order and disorder in proteins conditional random fields
1403 -- 1405Thibaut Jombart. ::::adegenet::::: a R package for the multivariate analysis of genetic markers
1406 -- 1407Gilles Guillot, Filipe Santos, Arnaud Estoup. Analysing georeferenced population genetics data with Geneland: a new algorithm to deal with null alleles and a friendly graphical user interface
1408 -- 1409Bo Peng, Christopher I. Amos. Forward-time simulations of non-random mating populations using simuPOP
1410 -- 1412Jung-jae Kim, Piotr Pezik, Dietrich Rebholz-Schuhmann. MedEvi: Retrieving textual evidence of relations between biomedical concepts from Medline
1413 -- 1415Soyang Ha, Young-Ju Seo, Min-Seok Kwon, Byung-Ha Chang, Cheol Kyu Han, Jeong Hyeok Yoon. IDMap: facilitating the detection of potential leads with therapeutic targets
1416 -- 1417Andreas Quandt, Patricia Hernandez, Alexandre Masselot, Céline Hernandez, Sergio Maffioletti, Cesare Pautasso, Ron D. Appel, Frédérique Lisacek. swissPIT: a novel approach for pipelined analysis of mass spectrometry data
1418 -- 1419Jonathan L. Lustgarten, Chad Kimmel, Henrik Ryberg, William R. Hogan. EPO-KB: a ::::searchable:::: knowledge base of biomarker to protein links