1975 | -- | 1979 | Krishna R. Kalari, Thomas L. Casavant, Todd E. Scheetz. A knowledge-based approach to predict intragenic deletions or duplications |
1980 | -- | 1986 | Matthew N. Davies, Andrew Secker, Alex Alves Freitas, Edward Clark, Jonathan Timmis, Darren R. Flower. Optimizing amino acid groupings for GPCR classification |
1987 | -- | 1993 | Dariusz Przybylski, Burkhard Rost. Powerful fusion: PSI-BLAST and consensus sequences |
1994 | -- | 2001 | Xiang Chen, Simin He, Dongbo Bu, Fa Zhang, Zhiyong Wang, Runsheng Chen, Wen Gao. FlexStem: improving predictions of RNA secondary structures with pseudoknots by reducing the search space |
2002 | -- | 2009 | Majid Masso, Iosif I. Vaisman. Accurate prediction of stability changes in protein mutants by combining machine learning with structure based computational mutagenesis |
2010 | -- | 2014 | Dhammika Amaratunga, Javier Cabrera, Yung-Seop Lee. Enriched random forests |
2015 | -- | 2022 | Liang Chen, Tiejun Tong, Hongyu Zhao. Considering dependence among genes and markers for false discovery control in eQTL mapping |
2023 | -- | 2029 | TaeHyun Hwang, Hugues Sicotte, Ze Tian, Baolin Wu, Jean-Pierre Kocher, Dennis A. Wigle, Vipin Kumar, Rui Kuang. Robust and efficient identification of biomarkers by classifying features on graphs |
2030 | -- | 2036 | Ioanna Tachmazidou, Toby Andrew, Claudio J. Verzilli, Michael R. Johnson, Maria De Iorio. Bayesian survival analysis in genetic association studies |
2037 | -- | 2043 | Thomas Maiwald, Jens Timmer. Dynamical modeling and multi-experiment fitting with PottersWheel |
2044 | -- | 2050 | Markus W. Covert, Nan Xiao, Tiffany J. Chen, Jonathan R. Karr. Integrating metabolic, transcriptional regulatory and signal transduction models in ::::Escherichia coli:::: |
2051 | -- | 2056 | Viviane Galvão, José Garcia Vivas Miranda, Ricardo Ribeiro dos Santos. Development of a two-dimensional agent-based model for chronic chagasic cardiomyopathy after stem cell transplantation |
2057 | -- | 2063 | Min Zhang, Chen Yao, Zheng Guo, Jinfeng Zou, Lin Zhang, Hui Xiao, Dong Wang, Da Yang, Xue Gong, Jing Zhu, Yanhui Li, Xia Li. Apparently low reproducibility of true differential expression discoveries in microarray studies |
2064 | -- | 2070 | Mudassar Iqbal, Alex Alves Freitas, Colin G. Johnson, Massimo Vergassola. Message-passing algorithms for the prediction of protein domain interactions from protein-protein interaction data |
2071 | -- | 2078 | Marco Grzegorczyk, Dirk Husmeier, Kieron D. Edwards, Peter Ghazal, Andrew J. Millar. Modelling non-stationary gene regulatory processes with a non-homogeneous Bayesian network and the allocation sampler |
2079 | -- | 2085 | Kathrin Fenner, Junfeng Gao, Stefan Kramer, Lynda B. M. Ellis, Lawrence P. Wackett. Data-driven extraction of relative reasoning rules to limit combinatorial explosion in biodegradation pathway prediction |
2086 | -- | 2093 | Hagit Shatkay, Fengxia Pan, Andrey Rzhetsky, W. John Wilbur. Multi-dimensional classification of biomedical text: Toward automated, practical provision of high-utility text to diverse users |
2094 | -- | 2095 | Marco Lippi, Andrea Passerini, Marco Punta, Burkhard Rost, Paolo Frasconi. MetalDetector: a web server for predicting metal-binding sites and disulfide bridges in proteins from sequence |
2096 | -- | 2097 | Richard C. G. Holland, Thomas A. Down, Matthew R. Pocock, Andreas Prlic, David Huen, Keith James, Sylvain Foisy, Andreas Dräger, Andy Yates, Michael Heuer, Mark J. Schreiber. BioJava: an open-source framework for bioinformatics |
2098 | -- | 2100 | Campbell O. Webb, David D. Ackerly, Steven W. Kembel. Phylocom: software for the analysis of phylogenetic community structure and trait evolution |
2101 | -- | 2102 | Romain Gautier, Dominique Douguet, Bruno Antonny, Guillaume Drin. HELIQUEST: a web server to screen sequences with specific alpha-helical properties |
2103 | -- | 2104 | William D. Nelson, Kert Viele, Bert C. Lynn. An integrated approach for automating validation of extracted ion chromatographic peaks |
2105 | -- | 2107 | Ryan Abo, Stacey Knight, Jathine Wong, Angela Cox, Nicola J. Camp. hapConstructor: automatic construction and testing of haplotypes in a Monte Carlo framework |
2108 | -- | 2109 | Torsten Blum, Oliver Kohlbacher. MetaRoute: fast search for relevant metabolic routes for interactive network navigation and visualization |
2110 | -- | 2111 | H. Ramos, P. Shannon, Ruedi Aebersold. The protein information and property explorer: an easy-to-use, rich-client web application for the management and functional analysis of proteomic data |
2112 | -- | 2114 | Robert Kincaid, Allan Kuchinsky, Michael L. Creech. VistaClara: an expression browser plug-in for Cytoscape |
2115 | -- | 2116 | Jan Krumsiek, Caroline C. Friedel, Ralf Zimmer. ProCope - protein complex prediction and evaluation |
2117 | -- | 2118 | Bing Xiong, Ke Liu, Jie Wu, David L. Burk, Hualiang Jiang, Jingkang Shen. DrugViz: a Cytoscape plugin for visualizing and analyzing small molecule drugs in biological networks |
2119 | -- | 2121 | Rafael C. Jimenez, Antony F. Quinn, Alexander Garcia, Alberto Labarga, Kieran O Neill, Fernando Martinez, Gustavo A. Salazar, Henning Hermjakob. Dasty2, an Ajax protein DAS client |
2122 | -- | 2123 | Catherine M. Lloyd, James R. Lawson, Peter J. Hunter, P. F. Nielsen. The CellML Model Repository |
2124 | -- | 2125 | Miguel Pignatelli, Gabriel Aparício, Ignacio Blanquer, Vicente Hernández, Andrés Moya, Javier Tamames. Metagenomics reveals our incomplete knowledge of global diversity |