Journal: Bioinformatics

Volume 26, Issue 22

2803 -- 2810E. R. Martin, D. D. Kinnamon, M. A. Schmidt, E. H. Powell, Stephan Züchner, R. W. Morris. SeqEM: an adaptive genotype-calling approach for next-generation sequencing studies
2811 -- 2817Pantelis G. Bagos, Elisanthi P. Nikolaou, Theodore D. Liakopoulos, Konstantinos D. Tsirigos. Combined prediction of Tat and Sec signal peptides with hidden Markov models
2818 -- 2825Saheli Datta, Raquel Prado, Abel Rodríguez, Ananías A. Escalante. Characterizing molecular adaptation: a hierarchical approach to assess the selective influence of amino acid properties
2826 -- 2832Mike J. Mason, Kathrin Plath, Qing Zhou. Identification of Context-Dependent Motifs by Contrasting ChIP Binding Data
2833 -- 2840Sebastian Kelm, Jiye Shi, Charlotte M. Deane. MEDELLER: homology-based coordinate generation for membrane proteins
2841 -- 2848Veit Schwämmle, Ole Nørregaard Jensen. A simple and fast method to determine the parameters for fuzzy c-means cluster analysis
2849 -- 2855Pei Fen Kuan, Sijian Wang, Xin Zhou, Haitao Chu. A statistical framework for Illumina DNA methylation arrays
2856 -- 2862Dumitru Brinza, Matthew Schultz, Glenn Tesler, Vineet Bafna. RAPID detection of gene-gene interactions in genome-wide association studies
2863 -- 2866Tianjiao Chu, Kimberly Bunce, W. Allen Hogge, David G. Peters. Statistical considerations for digital approaches to non-invasive fetal genotyping
2867 -- 2873Ani Manichaikul, Josyf Mychaleckyj, Stephen S. Rich, Kathy Daly, Michèle Sale, Wei-min Chen. Robust relationship inference in genome-wide association studies
2874 -- 2880N. Radde. Fixed point characterization of biological networks with complex graph topology
2881 -- 2888Tiejun Cheng, Yanli Wang, Stephen H. Bryant. Investigating the correlations among the chemical structures, bioactivity profiles and molecular targets of small molecules
2889 -- 2896Eneko Agirre, Aitor Soroa, Mark Stevenson. Graph-based Word Sense Disambiguation of biomedical documents
2897 -- 2899Mulin Jun Li, Pak Chung Sham, Junwen Wang. FastPval: a fast and memory efficient program to calculate very low ::::P::::-values from empirical distribution
2900 -- 2901Nenad Bartonicek, Anton J. Enright. SylArray: a web server for automated detection of miRNA effects from expression data
2902 -- 2903Joern Toedling, Constance Ciaudo, Olivier Voinnet, Edith Heard, Emmanuel Barillot. girafe - an R/Bioconductor package for functional exploration of aligned next-generation sequencing reads
2904 -- 2905Loredana Le Pera, Paolo Marcatili, Anna Tramontano. PICMI: mapping point mutations on genomes
2906 -- 2907Arthur Wuster, A. J. Venkatakrishnan, Gebhard F. X. Schertler, M. Madan Babu. Spial: analysis of subtype-specific features in multiple sequence alignments of proteins
2908 -- 2909Robert Davey, Stephen A. James, Jo L. Dicks, Ian N. Roberts. TURNIP: tracking unresolved nucleotide polymorphisms in large hard-to-assemble regions of repetitive DNA sequence
2910 -- 2911Bret R. Larget, Satish K. Kotha, Colin N. Dewey, Cécile Ané. BUCKy: Gene tree/species tree reconciliation with Bayesian concordance analysis
2912 -- 2913Zhi-Zhong Chen, Lusheng Wang. HybridNET: a tool for constructing hybridization networks
2914 -- 2915Ofir Cohen, Haim Ashkenazy, Frida Belinky, Dorothée Huchon, Tal Pupko. GLOOME: gain loss mapping engine
2916 -- 2917Alberto J. M. Martin, Ian Walsh, Silvio C. E. Tosatto. MOBI: a web server to define and visualize structural mobility in NMR protein ensembles
2918 -- 2919Francois Berenger, Camille Coti, Kam Y. J. Zhang. PAR: a PARallel and distributed job crusher
2920 -- 2921Daniel B. Roche, Stuart J. Tetchner, Liam J. McGuffin. The binding site distance test score: a robust method for the assessment of predicted protein binding sites
2922 -- 2923Michel A. Westenberg, Jos B. T. M. Roerdink, Oscar P. Kuipers, Sacha A. F. T. van Hijum. SpotXplore: a Cytoscape plugin for visual exploration of hotspot expression in gene regulatory networks
2924 -- 2926Anna Bauer-Mehren, Michael Rautschka, Ferran Sanz, Laura Inés Furlong. DisGeNET: a Cytoscape plugin to visualize, integrate, search and analyze gene-disease networks
2927 -- 2928J. Montojo, K. Zuberi, H. Rodriguez, F. Kazi, G. Wright, S. L. Donaldson, Q. Morris, G. D. Bader. GeneMANIA Cytoscape plugin: fast gene function predictions on the desktop