| 1 | -- | 8 | Christos Kozanitis, Andrew Heiberg, George Varghese, Vineet Bafna. Using Genome Query Language to uncover genetic variation |
| 9 | -- | 16 | Sven H. Giese, Franziska Zickmann, Bernhard Y. Renard. Specificity control for read alignments using an artificial reference genome-guided false discovery rate |
| 17 | -- | 23 | Daniel Alonso-Alemany, Aurélien Barré, Stefano Beretta, Paola Bonizzoni, Macha Nikolski, Gabriel Valiente. Further Steps in TANGO: improved taxonomic assignment in metagenomics |
| 24 | -- | 30 | Lilian Janin, Giovanna Rosone, Anthony J. Cox. Adaptive reference-free compression of sequence quality scores |
| 31 | -- | 37 | Rayan Chikhi, Paul Medvedev. k-mer size selection for genome assembly |
| 38 | -- | 39 | Daniel H. Huson, Chao Xie. A poor man's BLASTX - high-throughput metagenomic protein database search using PAUDA |
| 40 | -- | 49 | David Hernández, Ryan Tewhey, Jean-Baptiste Veyrieras, Laurent Farinelli, Magne Østerås, Patrice François, Jacques Schrenzel. Staphylococcus aureus genome assembly from 100 bp short and long range paired-end reads |
| 50 | -- | 60 | Noemi Andor, Julie V. Harness, Sabine Müller, Hans-Werner Mewes, Claudia Petritsch. EXPANDS: expanding ploidy and allele frequency on nested subpopulations |
| 61 | -- | 70 | Paulo Vieira Milreu, Cecilia Coimbra Klein, Ludovic Cottret, Vicente Acuña, Etienne Birmelé, Michele Borassi, Christophe Junot, Alberto Marchetti-Spaccamela, Andrea Marino, Leen Stougie, Fabien Jourdan, Pierluigi Crescenzi, Vincent Lacroix, Marie-France Sagot. Telling metabolic stories to explore metabolomics data: a case study on the yeast response to cadmium exposure |
| 71 | -- | 80 | Mingjun Wang, Xing-Ming Zhao, Hao Tan, Tatsuya Akutsu, James C. Whisstock, Jiangning Song. Cascleave 2.0, a new approach for predicting caspase and granzyme cleavage targets |
| 81 | -- | 93 | Yijie Wang, Xiaoning Qian. Functional module identification in protein interaction networks by interaction patterns |
| 94 | -- | 103 | Yungang Xu, Maozu Guo, Xiaoyan Liu, Chun-yu Wang, Yang Liu. Glycine max) microRNA functional network based on target gene network |
| 104 | -- | 114 | Songhua Xu, Hong-Jun Yoon, Georgia D. Tourassi. A user-oriented web crawler for selectively acquiring online content in e-health research |
| 115 | -- | 116 | Sebastian Bartschat, Stephanie Kehr, Hakim Tafer, Peter F. Stadler, Jana Hertel. snoStrip: a snoRNA annotation pipeline |
| 117 | -- | 118 | Armando J. Pinho, Diogo Pratas. MFCompress: a compression tool for FASTA and multi-FASTA data |
| 119 | -- | 120 | André Schumacher, Luca Pireddu, Matti Niemenmaa, Aleksi Kallio, Eija Korpelainen, Gianluigi Zanetti, Keijo Heljanko. SeqPig: simple and scalable scripting for large sequencing data sets in Hadoop |
| 121 | -- | 122 | Christoph Gille, Weyand Birgit, Andreas Gille. Sequence alignment visualization in HTML5 without Java |
| 123 | -- | 124 | Michael J. Landis, Trevor Bedford. Phylowood: interactive web-based animations of biogeographic and phylogeographic histories |
| 125 | -- | 126 | Shannon L. N. Mayne, Hugh-George Patterton. AnchorMS: a bioinformatics tool to derive structural information from the mass spectra of cross-linked protein complexes |
| 127 | -- | 128 | Thomas Sandmann, Sarah K. Kummerfeld, Robert Gentleman, Richard Bourgon. gCMAP: user-friendly connectivity mapping with R |
| 129 | -- | 130 | Maxwell Lewis Neal, Michal Galdzicki, J. T. Gallimore, H. M. Sauro. A C library for retrieving specific reactions from the BioModels database |
| 131 | -- | 132 | Matthias Bock, Till Scharp, Chaitanya Talnikar, Edda Klipp. BooleSim: an interactive Boolean network simulator |
| 133 | -- | 134 | Grant Hughes, Charmion Cruickshank-Quinn, Richard Reisdorph, Sharon Lutz, Irina Petrache, Nichole Reisdorph, Russell Bowler, Katerina Kechris. MSPrep - Summarization, normalization and diagnostics for processing of mass spectrometry-based metabolomic data |
| 135 | -- | 136 | Minji Jeon, Sunwon Lee, Kyubum Lee, Aik Choon Tan, Jaewoo Kang. BEReX: Biomedical Entity-Relationship eXplorer |
| 137 | -- | 138 | Tomasz Jetka, Agata Charzynska, Anna Gambin, Michael P. H. Stumpf, Michal Komorowski. StochDecomp - Matlab package for noise decomposition in stochastic biochemical systems |
| 139 | -- | 140 | Özgün Babur, Bülent Arman Aksoy, Igor Rodchenkov, Selçuk Onur Sümer, Chris Sander, Emek Demir. Pattern search in BioPAX models |
| 141 | -- | 142 | Jianfei Hu, Hee-Sool Rho, Robert H. Newman, Jin Zhang, Heng Zhu, Jiang Qian. PhosphoNetworks: a database for human phosphorylation networks |
| 143 | -- | 145 | Burkhard Rost. ISCB: past-present perspective for the International Society for Computational Biology |
| 146 | -- | 147 | Series editors. Andreas Dress, Michal Linial, Olga Troyanskaya, Martin Vingron: ISCB/SPRINGER series in computational biology |
| 148 | -- | 149 | Jim Cavalcoli, Lonnie Welch, Bruce J. Aronow, Sorin Draghici, Daisuke Kihara. The International Society of Computational Biology presents: the Great Lakes Bioinformatics Conference, May 16-18, 2014, Cincinnati, Ohio |