Journal: Bioinformatics

Volume 30, Issue 14

1943 -- 1949Xiaowei Zhou, Jiming Liu, Xiang Wan, Weichuan Yu. Piecewise-constant and low-rank approximation for identification of recurrent copy number variations
1950 -- 1957Rajat Shuvro Roy, Debashish Bhattacharya, Alexander Schliep. k-mers with cache-efficient algorithms
1958 -- 1964William H. Majoros, Niel Lebeck, Uwe Ohler, Song Li. Improved transcript isoform discovery using ORF graphs
1965 -- 1973Emi Tanaka, Timothy L. Bailey, Uri Keich. Improving MEME via a two-tiered significance analysis
1974 -- 1982Christophe Charpilloz, Anne-Lise Veuthey, Bastien Chopard, Jean-Luc Falcone. Motifs tree: a new method for predicting post-translational modifications
1983 -- 1990A. Mary Thangakani, Sandeep Kumar, R. Nagarajan, Devadasan Velmurugan, M. Michael Gromiha. GAP: towards almost 100 percent prediction for β-strand-mediated aggregating peptides with distinct morphologies
1991 -- 1999Chris-Andre Leimeister, Marcus Boden, Sebastian Horwege, Sebastian Lindner, Burkhard Morgenstern. Fast alignment-free sequence comparison using spaced-word frequencies
2000 -- 2008Chris-Andre Leimeister, Burkhard Morgenstern. k-mismatch average common substring approach to alignment-free sequence comparison
2009 -- 2017Marcel Kucharík, Ivo L. Hofacker, Peter F. Stadler, Jing Qin. Basin Hopping Graph: a computational framework to characterize RNA folding landscapes
2018 -- 2025Yuan-De Tan, Hongyan Xu. A general method for accurate estimation of false discovery rates in identification of differentially expressed genes
2026 -- 2034Pekka Marttinen, Matti Pirinen, Antti-Pekka Sarin, Jussi Gillberg, Johannes Kettunen, Ida Surakka, Antti J. Kangas, Pasi Soininen, Paul O'Reilly, Marika Kaakinen, Mika Kähönen, Terho Lehtimäki, Mika Ala-Korpela, Olli T. Raitakari, Veikko Salomaa, Marjo-Riitta Järvelin, Samuli Ripatti, Samuel Kaski. Assessing multivariate gene-metabolome associations with rare variants using Bayesian reduced rank regression
2035 -- 2042Amir R. Kermany, Laure Segurel, Tiffany R. Oliver, Molly Przeworski. TroX: a new method to learn about the genesis of aneuploidy from trisomic products of conception
2043 -- 2050Mario Latendresse, Markus Krummenacker, Peter D. Karp. Optimal metabolic route search based on atom mappings
2051 -- 2059Bülent Arman Aksoy, Emek Demir, Özgün Babur, Weiqing Wang, Xiaohong Jing, Nikolaus Schultz, Chris Sander. Prediction of individualized therapeutic vulnerabilities in cancer from genomic profiles
2060 -- 2065Davide Rambaldi, Salvatore Pece, Pier Paolo Di Fiore. flowFit: a Bioconductor package to estimate proliferation in cell-tracking dye studies
2066 -- 2067Uciel Chorostecki, Javier F. Palatnik. comTAR: a web tool for the prediction and characterization of conserved microRNA targets in plants
2068 -- 2069Torsten Seemann. Prokka: rapid prokaryotic genome annotation
2070 -- 2072Peter Audano, Fredrik Vannberg. KAnalyze: a fast versatile pipelined K-mer toolkit
2073 -- 2075Zhenpeng Li, Yang Huang, Yabo Ouyang, Yang Jiao, Hui Xing, Lingjie Liao, Shibo Jiang, Yiming Shao, Liying Ma. CorMut: an R/Bioconductor package for computing correlated mutations based on selection pressure
2076 -- 2078Valerie Obenchain, Michael F. Lawrence, Vincent J. Carey, Stephanie M. Gogarten, Paul Shannon, Martin Morgan. VariantAnnotation: a Bioconductor package for exploration and annotation of genetic variants
2079 -- 2080Andreas Sand, Morten Kragelund Holt, Jens Johansen, Gerth Stølting Brodal, Thomas Mailund, Christian N. S. Pedersen. tqDist: a library for computing the quartet and triplet distances between binary or general trees
2081 -- 2083Dario Ghersi, Mona Singh. molBLOCKS: decomposing small molecule sets and uncovering enriched fragments
2084 -- 2085Sam Buckberry, Stephen J. Bent, Tina Bianco-Miotto, Claire T. Roberts. massiR: a method for predicting the sex of samples in gene expression microarray datasets
2086 -- 2088Dale R. Nyholt. SECA: SNP effect concordance analysis using genome-wide association summary results
2089 -- 2090So Young Ryu, Samuel H. Payne, Christoph Schaab, Wenzhong Xiao. Beyond the proteome: Mass Spectrometry Special Interest Group (MS-SIG) at ISMB/ECCB 2013
2091 -- 2092Mark N. Wass, Sean D. Mooney, Michal Linial, Predrag Radivojac, Iddo Friedberg. The automated function prediction SIG looks back at 2013 and prepares for 2014