| 3721 | -- | 3724 | Michael E. Kurczy, Julijana Ivanisevic, Caroline H. Johnson, Winnie Uritboonthai, Linh Hoang, Mingliang Fang, Matthew Hicks, Anthony Aldebot, Duane Rinehart, Lisa J. Mellander, Ralf Tautenhahn, Gary J. Patti, Mary E. Spilker, H. Paul Benton, Gary Siuzdak. Determining conserved metabolic biomarkers from a million database queries |
| 3725 | -- | 3732 | Taj Morton, Weng-Keen Wong, Molly Megraw. TIPR: transcription initiation pattern recognition on a genome scale |
| 3733 | -- | 3741 | Shunichi Kosugi, Hideki Hirakawa, Satoshi Tabata. GMcloser: closing gaps in assemblies accurately with a likelihood-based selection of contig or long-read alignments |
| 3742 | -- | 3747 | Matthew E. Holford, Michael Krauthammer. Mutadelic: mutation analysis using description logic inferencing capabilities |
| 3748 | -- | 3750 | Hao-Dong Xu, Shao-Ping Shi, Ping-Ping Wen, Jian-Ding Qiu. SuccFind: a novel succinylation sites online prediction tool via enhanced characteristic strategy |
| 3751 | -- | 3757 | Jonathan K. Vis, Martijn Vermaat, Peter E. M. Taschner, Joost N. Kok, Jeroen F. J. Laros. An efficient algorithm for the extraction of HGVS variant descriptions from sequences |
| 3758 | -- | 3766 | Dieter De Witte, Jan Van de Velde, Dries Decap, Michiel Van Bel, Pieter Audenaert, Piet Demeester, Bart Dhoedt, Klaas Vandepoele, Jan Fostier. cis-regulatory elements |
| 3767 | -- | 3772 | Mario Abdel Messih, Rosalba Lepore, Anna Tramontano. LoopIng: a template-based tool for predicting the structure of protein loops |
| 3773 | -- | 3781 | Jing Yang, Bao-Ji He, Richard Jang, Yang Zhang, Hong-bin Shen. ab initio structure prediction of cysteine-rich proteins |
| 3782 | -- | 3789 | Yassine Ghouzam, Guillaume Postic, Alexandre G. de Brevern, Jean-Christophe Gelly. Improving protein fold recognition with hybrid profiles combining sequence and structure evolution |
| 3790 | -- | 3798 | Alejandro Q. Nato, Nicola H. Chapman, Harkirat K. Sohi, Hiep D. Nguyen, Zoran Brkanac, Ellen M. Wijsman. PBAP: a pipeline for file processing and quality control of pedigree data with dense genetic markers |
| 3799 | -- | 3806 | Karen A. Ryall, Jimin Shin, Minjae Yoo, Trista K. Hinz, Jihye Kim, Jaewoo Kang, Lynn E. Heasley, Aik Choon Tan. Identifying kinase dependency in cancer cells by integrating high-throughput drug screening and kinase inhibition data |
| 3807 | -- | 3814 | Franziska Taruttis, Rainer Spang, Julia C. Engelmann. A statistical approach to virtual cellular experiments: improved causal discovery using accumulation IDA (aIDA) |
| 3815 | -- | 3821 | John-Patrick Mpindi, Potdar Swapnil, Bychkov Dmitrii, Saarela Jani, Khalid Saeed, Krister Wennerberg, Tero Aittokallio, Päivi Östling, Olli-P. Kallioniemi. Impact of normalization methods on high-throughput screening data with high hit rates and drug testing with dose-response data |
| 3822 | -- | 3829 | Agne Antanaviciute, Christopher M. Watson, Sally M. Harrison, Carolina Lascelles, Laura A. Crinnion, Alexander F. Markham, David T. Bonthron, Ian M. Carr. OVA: integrating molecular and physical phenotype data from multiple biomedical domain ontologies with variant filtering for enhanced variant prioritization |
| 3830 | -- | 3831 | Marcin Kierczak, Jagoda Jablonska, Simon K. G. Forsberg, Matteo Bianchi, Katarina Tengvall, Mats Pettersson, Veronika Scholz, Jennifer R. S. Meadows, Patric Jern, Örjan Carlborg, Kerstin Lindblad-Toh. cgmisc: enhanced genome-wide association analyses and visualization |
| 3832 | -- | 3834 | Chao He, Michael Q. Zhang, Xiaowo Wang. MICC: an R package for identifying chromatin interactions from ChIA-PET data |
| 3835 | -- | 3837 | Nicholas W. Wolfe, Nathan L. Clark. ERC analysis: web-based inference of gene function via evolutionary rate covariation |
| 3838 | -- | 3840 | Bryson C. Gibbons, Matthew Chambers, Matthew E. Monroe, David L. Tabb, Samuel H. Payne. Correcting systematic bias and instrument measurement drift with mzRefinery |
| 3841 | -- | 3843 | Giuseppe Profiti, Piero Fariselli, Rita Casadio. AlignBucket: a tool to speed up 'all-against-all' protein sequence alignments optimizing length constraints |
| 3844 | -- | 3846 | Vojtech Bystrý, Andreas Agathangelidis, Vasilis Bikos, Lesley Ann Sutton, Panagiotis Baliakas, Anastasia Hadzidimitriou, Kostas Stamatopoulos, Nikos Darzentas. ARResT/AssignSubsets: a novel application for robust subclassification of chronic lymphocytic leukemia based on B cell receptor IG stereotypy |
| 3847 | -- | 3849 | Simon G. Coetzee, Gerhard A. Coetzee, Dennis J. Hazelett. motifbreakR: an R/Bioconductor package for predicting variant effects at transcription factor binding sites |
| 3850 | -- | 3852 | Jinchao Yu, Géraldine Picord, Pierre Tufféry, Raphaël Guérois. HHalign-Kbest: exploring sub-optimal alignments for remote homology comparative modeling |
| 3853 | -- | 3855 | Iñigo Marcos-Alcalde, Javier Setoain, Jesús I. Mendieta-Moreno, Jesús Mendieta, Paulino Gómez-Puertas. MEPSA: minimum energy pathway analysis for energy landscapes |
| 3856 | -- | 3858 | Francis Gaudreault, Louis-Philippe Morency, Rafael J. Najmanovich. NRGsuite: a PyMOL plugin to perform docking simulations in real time using FlexAID |
| 3859 | -- | 3861 | Adam S. Brown, Chirag J. Patel. aRrayLasso: a network-based approach to microarray interconversion |
| 3862 | -- | 3864 | Alencar Xavier, Shizhong Xu, William M. Muir, Katy Martin Rainey. NAM: association studies in multiple populations |
| 3865 | -- | 3867 | Emmanuel Chaplais, Henri-Jean Garchon. stringgaussnet: from differentially expressed genes to semantic and Gaussian networks generation |
| 3868 | -- | 3869 | Georg Summer, Thomas Kelder, Keiichiro Ono, Marijana Radonjic, Stephane Heymans, Barry Demchak. cyNeo4j: connecting Neo4j and Cytoscape |
| 3870 | -- | 3872 | Jing Yang, Su-Juan Wu, Yi-Xue Li, Yuan-Yuan Li. DSviaDRM: an R package for estimating disease similarity via dysfunctional regulation mechanism |
| 3873 | -- | 3874 | Mario Di Guardo, Diego Micheletti, Luca Bianco, Herma J. J. Koehorst-van Putten, Sara Longhi, Fabrizio Costa, Maria J. Aranzana, Riccardo Velasco, Pere Arús, Michela Troggio, Eric W. van de Weg. ASSIsT: an automatic SNP scoring tool for in- and outbreeding species |
| 3875 | -- | 3877 | Stefan Helfrich, Charaf E. Azzouzi, Christopher Probst, Johannes Seiffarth, Alexander Grünberger, Wolfgang Wiechert, Dietrich Kohlheyer, Katharina Nöh. Vizardous: interactive analysis of microbial populations with single cell resolution |
| 3878 | -- | 3880 | Matthias Ziehm, Dobril K. Ivanov, Aditi Bhat, Linda Partridge, Janet M. Thornton. SurvCurv database and online survival analysis platform update |