Table of Contents

• SOMOSPIE: A Modular SOil MOisture SPatial Inference Engine Based on Data-Driven DecisionsDanny Rorabaugh, Mario Guevara, Ricardo Llamas, Joy Kitson, Rodrigo Vargas, Michela Taufer. 1-10 [doi]
• The International Forest Risk Model (INFORM): A Method for Assessing Supply Chain Deforestation Risk with Imperfect DataNeil Caithness, Cécile Lachaux, David C. H. Wallom. 11-17 [doi]
• ForestEyes Project: Can Citizen Scientists Help Rainforests?Fernanda Beatriz Jordan Rojas Dallaqua, Álvaro Luiz Fazenda 0001, Fábio Augusto Faria. 18-27 [doi]
• Data Identification and Process Monitoring for Reproducible Earth Observation ResearchBernhard Gößwein, Tomasz Miksa, Andreas Rauber, Wolfgang Wagner. 28-38 [doi]
• A Hybrid Algorithm for Mineral Dust Detection Using Satellite DataPeichang Shi, Qianqian Song, Janita Patwardhan, Zhibo Zhang, Jianwu Wang, Aryya Gangopadhyay. 39-46 [doi]
• Workflow Design Analysis for High Resolution Satellite Image AnalysisIoannis Paraskevakos, Matteo Turilli, Bento Collares Gonçalves, Heather J. Lynch, Shantenu Jha. 47-56 [doi]
• SATVAM: Toward an IoT Cyber-Infrastructure for Low-Cost Urban Air Quality MonitoringYogesh Simmhan, Malati Hegde, Rajesh Zele, Sachchida N. Tripathi, Srijith Nair, Sumit K. Monga, Ravi Sahu, Kuldeep Dixit, Ronak Sutaria, Brijesh Mishra, Anamika Sharma, Anand SVR. 57-66 [doi]
• Toward a Dynamic Network-Centric Distributed Cloud Platform for Scientific Workflows: A Case Study for Adaptive Weather SensingEric Lyons, Anirban Mandal, George Papadimitriou, Cong Wang 0014, Komal Thareja, Paul Ruth, Juan J. Villalobos, Ivan Rodero, Ewa Deelman, Michael Zink. 67-76 [doi]
• The Evolution of Bits and Bottlenecks in a Scientific Workflow Trying to Keep Up with Technology: Accelerating 4D Image Segmentation Applied to NASA DataScott L. Sellars, Joulien Tatar, Phu Nguyen, Eric Shearer, Soroosh Sorooshian, F. Martin Ralph, John Graham, Dmitry Mishin, Kyle Marcus, Ilkay Altintas, Thomas A. DeFanti, Larry Smarr, Camille Crittenden, Frank Würthwein. 77-85 [doi]
• Out-of-the-Box Reproducibility: A Survey of Machine Learning PlatformsRichard Isdahl, Odd Erik Gundersen. 86-95 [doi]
• dislib: Large Scale High Performance Machine Learning in PythonJavier Álvarez Cid-Fuentes, Salvi Solà, Pol Álvarez, Alfred Castro-Ginard, Rosa M. Badia. 96-105 [doi]
• Recognition of Frog Chorusing with Acoustic Indices and Machine LearningHongxiao Gan, Jinglan Zhang, Michael Towsey, Anthony Truskinger, Debra Stark, Berndt van Rensburg, Yuefeng Li, Paul Roe. 106-115 [doi]
• Quality-Aware Human-Machine Text Extraction for Biocollections using Ensembles of OCRsIcaro Alzuru, Rhiannon Stephens, Andréa M. Matsunaga, Maurício O. Tsugawa, Paul Flemons, José A. B. Fortes. 116-125 [doi]
• Active Learning Yields Better Training Data for Scientific Named Entity RecognitionRoselyne Tchoua, Aswathy Ajith, Zhi-hong, Logan T. Ward, Kyle Chard, Debra Audus, Shrayesh Patel, Juan de Pablo, Ian T. Foster. 126-135 [doi]
• Reliability-Aware and Graph-Based Approach for Rank Aggregation of Biological DataPierre Andrieu, Bryan Brancotte, Laurent Bulteau, Sarah Cohen Boulakia, Alain Denise, Adeline Pierrot, Stéphane Vialette. 136-145 [doi]
• Evaluation of Pilot Jobs for Apache Spark Applications on HPC ClustersValérie Hayot-Sasson, Tristan Glatard. 146-155 [doi]
• Profit Optimization for Splitting and Sampling Based Resource Management in Big Data Analytics-as-a-Service Platforms in Cloud Computing EnvironmentsYali Zhao, Athanasios V. Vasilakos, James Bailey 0001, Richard O. Sinnott. 156-167 [doi]
• On Distributed Information Composition in Big Data SystemsHaifa AlQuwaiee, Songlin He, Chase Qishi Wu, Qiang Tang 0005, Xuewen Shen. 168-177 [doi]
• Dynamic Sizing of Continuously Divisible Jobs for Heterogeneous ResourcesNicholas L. Hazekamp, Benjamín Tovar, Douglas Thain. 178-187 [doi]
• Characterizing In Situ and In Transit Analytics of Molecular Dynamics Simulations for Next-Generation SupercomputersMichela Taufer, Ewa Deelman, Stephen Thomas, Michael R. Wyatt II, Tu Mai Anh Do, Loïc Pottier, Rafael Ferreira da Silva, Harel Weinstein, Michel A. Cuendet, Trilce Estrada. 188-198 [doi]
• SPARCS: Stream-Processing Architecture Applied in Real-Time Cyber-Physical SecurityReinhard Gentz, Sean Peisert, Joshua Boverhof, Daniel Gunter. 199-202 [doi]
• Timing is Everything: Identifying Diverse Interaction Dynamics in Scenario and Non-Scenario MeetingsChreston Miller, Christa Miller. 203-212 [doi]
• Multi-model Investigative Exploration of Social Media Data with BOUTIQUE: A Case Study in Public HealthJunan Guo, Subhasis Dasgupta, Amarnath Gupta. 213-216 [doi]
• Increasing Life Science Resources Re-Usability using Semantic Web TechnologiesMarine Louarn, Fabrice Chatonnet, Xavier Garnier, Thierry Fest, Anne Siegel, Olivier Dameron. 217-225 [doi]
• Data Encoding in Lossless Prediction-Based Compression AlgorithmsUgur Çayoglu, Frank Tristram, Jörg Meyer, Jennifer Schröter, Tobias Kerzenmacher, Peter Braesicke, Achim Streit. 226-234 [doi]
• defoe: A Spark-Based Toolbox for Analysing Digital Historical Textual DataRosa Filgueira, Mariona Coll Ardanuy, Giovanni Colavizza, James Hetherington, Melissa Terras, Michael Jackson, Anna Roubícková, Amrey Krause, Ruth Ahnert, Tessa Hauswedell, Julianne Nyhan, David Beavan, Timothy Hobson. 235-242 [doi]
• Understanding a Rapidly Expanding Refugee Camp Using Convolutional Neural Networks and Satellite ImagerySusanne Benz, Hogeun Park, Jiaxin Li, Daniel Crawl, Jessica Block, Mai H. Nguyen, Ilkay Altintas. 243-251 [doi]
• Social Media Intelligence and Learning Environment: an Open Source Framework for Social Media Data Collection, Analysis and CurationChen Wang, Luigi Marini, Chieh-Li Chin, Nickolas Vance, Curtis Donelson, Pascal Meunier, Joseph T. Yun. 252-261 [doi]
• Toward an Elastic Data Transfer InfrastructureJoaquín Chung, Zhengchun Liu, Rajkumar Kettimuthu, Ian T. Foster. 262-265 [doi]
• Scalable Performance Awareness for In Situ Scientific ApplicationsMatthew Wolf, Julien Dominski, Gabriele Merlo, Jong Choi, Greg Eisenhauer, Stéphane Ethier, Kevin A. Huck, Scott Klasky, Jeremy Logan, Allen D. Malony, Chad Wood. 266-276 [doi]
• ENVRI-FAIR - Interoperable Environmental FAIR Data and Services for Society, Innovation and ResearchAndreas Petzold, Ari Asmi, Alex Vermeulen, Gelsomina Pappalardo, Daniele Bailo, Dick Schaap, Helen M. Glaves, Ulrich Bundke, Zhiming Zhao. 277-280 [doi]
• Custom Execution Environments with Containers in Pegasus-Enabled Scientific WorkflowsKaran Vahi, Michael Zink, Mats Rynge, George Papadimitriou, Duncan A. Brown, Rajiv Mayani, Rafael Ferreira da Silva, Ewa Deelman, Anirban Mandal, Eric Lyons. 281-290 [doi]
• SciInc: A Container Runtime for Incremental RecomputationAndrew Youngdahl, Dai Hai Ton That, Tanu Malik. 291-300 [doi]
• Usage Patterns of Wideband Display Environments In e-Science Research, Development and TrainingJason Leigh, Krishna Bharadwaj, Arthur Nishimoto, Lance Long, Jason Haga, John Burns, Francis Cristobal, Jared McLean, Roberto Pelayo, Mahdi Belcaid, Dylan Kobayashi, Nurit Kirshenbaum, Troy Wooton, Alberto Gonzalez, Luc Renambot, Andrew E. Johnson, Maxine D. Brown, Andrew Burks. 301-310 [doi]
• Comprehensible Control for Researchers and Developers Facing Data ChallengesMalcolm P. Atkinson, Rosa Filgueira, Iraklis A. Klampanos, Antonis Koukourikos, Amrey Krause, Federica Magnoni, Christian Pagé, Andreas Rietbrock, Alessandro Spinuso. 311-320 [doi]
• BBBlockchain: Blockchain-Based Participation in Urban DevelopmentRobert Muth, Kerstin Eisenhut, Jochen Rabe, Florian Tschorsch. 321-330 [doi]
• A Framework for Model Search Across Multiple Machine Learning ImplementationsYoshiki Takahashi, Masato Asahara, Kazuyuki Shudo. 331-338 [doi]
• Enhanced Interactive Parallel Coordinates using Machine Learning and Uncertainty Propagation for Engineering DesignWiktor Piotrowski, Timoleon Kipouros, P. John Clarkson. 339-348 [doi]
• OKG-Soft: An Open Knowledge Graph with Machine Readable Scientific Software MetadataDaniel Garijo, Maximiliano Osorio, Deborah Khider, Varun Ratnakar, Yolanda Gil. 349-358 [doi]
• Efficient Runtime Capture of Multiworkflow Data Using ProvenanceRenan Souza, Marta Mattoso, Leonardo Azevedo, Raphael Thiago, Elton F. de Souza Soares, Marcelo Nery dos Santos, Marco A. S. Netto, Emilio Vital Brazil, Renato Cerqueira, Patrick Valduriez. 359-368 [doi]
• AdaptLidarTools: A Full-Waveform Lidar Processing SuiteRavi Shankar, Nayani T. Ilangakoon, Aaron Orenstein, Floriana Ciaglia, Nancy F. Glenn, Catherine Olschanowsky. 369-377 [doi]
• SDM: A Scientific Dataset Delivery PlatformIllyoung Choi, Jude C. Nelson, Larry L. Peterson, John H. Hartman. 378-387 [doi]
• Photon Propagation using GPUs by the IceCube Neutrino ObservatoryDmitry Chirkin, Juan Carlos Díaz-Vélez, Claudio Kopper, Alexander R. Olivas, Benedikt Riedel, Martin Rongen, David Schultz, Jakob van Santen. 388-393 [doi]
• Simulating Data Access Profiles of Computational Jobs in Data GridsVolodimir Begy, Joeri Hermans, Martin Barisits, Mario Lassnig, Erich Schikuta. 394-402 [doi]
• Towards Exascale: Measuring the Energy Footprint of Astrophysics HPC SimulationsGiuliano Taffoni, Manolis Katevenis, Renato Panchieri, Gino Perna, Luca Tornatore, David Goz, Antonio Ragagnin, Sara Bertocco, Igor Coretti, Manolis Marazakis, Fabien Chaix, Manolis Ploumidis. 403-412 [doi]
• The Future of Swedish e-Science: SeRC 2.0Erwin Laure, Olivia Eriksson, Erik Lindahl, Dan S. Henningson. 413-420 [doi]
• Understanding ML Driven HPC: Applications and InfrastructureShantenu Jha, Geoffrey C. Fox. 421-427 [doi]
• Transparency by Design in eScience ResearchBeth Plale. 428-431 [doi]
• Serverless Science for Simple, Scalable, and Shareable ScholarshipKyle Chard, Ian T. Foster. 432-438 [doi]
• Learning Everywhere: A Taxonomy for the Integration of Machine Learning and SimulationsGeoffrey C. Fox, Shantenu Jha. 439-448 [doi]
• Cyberinfrastructure Center of Excellence Pilot: Connecting Large Facilities CyberinfrastructureEwa Deelman, Ryan Mitchell, Loïc Pottier, Mats Rynge, Erik Scott, Karan Vahi, Marina Kogan, Jasmine Mann, Tom Gulbransen, Daniel Allen, David Barlow, Anirban Mandal, Santiago Bonarrigo, Chris Clark, Leslie Goldman, Tristan Goulden, Phil Harvey, David Hulsander, Steve Jacobs, Christine Laney, Ivan Lobo-Padilla, Jeremy Sampson, Valerio Pascucci, John Staarmann, Steve Stone, Susan Sons, Jane Wyngaard, Charles Vardeman, Steve Petruzza, Ilya Baldin, Laura Christopherson. 449-457 [doi]
• The Research Assistant and AI in eScienceDennis Gannon. 458-462 [doi]
• Transkribus. A Platform for Automated Text Recognition and Searching of Historical DocumentsSebastian Colutto, Philip Kahle, Günter Hackl, Günter Mühlberger. 463-466 [doi]
• Unlocking the LOFAR LTAHanno Spreeuw, Souley Madougou, Ronald van Haren, Berend Weel, Adam Belloum, Jason Maassen. 467-470 [doi]
• European HPC LandscapeFlorian Berberich, Janina Liebmann, Jean-Philippe Nominé, Oriol Pineda, Philippe Segers, Veronica Teodor. 471-478 [doi]
• Reference Exascale ArchitectureMartin Bobák 0001, Balázs Somosköi, Mara Graziani, Matti Heikkurinen, Maximilian Höb, Jan Schmidt, Ladislav Hluchý, Adam Belloum, Reginald Cushing, Jan Meizner, Piotr Nowakowski, Viet D. Tran, Ondrej Habala, Jason Maassen. 479-487 [doi]
• The AllScale APIPhilipp Gschwandtner, Herbert Jordan, Peter Thoman, Thomas Fahringer. 488-497 [doi]
• ESiWACE: On European Infrastructure Efforts for Weather and Climate Modeling at ExascalePhilipp Neumann, Joachim Biercamp. 498-501 [doi]
• Reproducibility by Other Means: Transparent Research ObjectsTimothy M. McPhillips, Craig Willis, Michael R. Gryk, Santiago Núñez Corrales, Bertram Ludäscher. 502-509 [doi]
• Interactivity, Distributed Workflows, and Thick Provenance: A Review of Challenges Confronting Digital Humanities Research ObjectsKatrina Fenlon. 510-513 [doi]
• Application of BagIt-Serialized Research Object Bundles for Packaging and Re-Execution of Computational AnalysesKyle Chard, Thomas Thelen, Matthew J. Turk, Craig Willis, Niall Gaffney, Matthew B. Jones, Kacper Kowalik, Bertram Ludäscher, Timothy M. McPhillips, Jarek Nabrzyski, Victoria Stodden, Ian J. Taylor. 514-521 [doi]
• Data Quality Issues in Current NanopublicationsImran Asif, Jessica Chen-Burger, Alasdair J. G. Gray. 522-527 [doi]
• Describing Datasets in WikidataDenny Vrandecic. 528-529 [doi]
• Making Data FAIR Requires More than Just Principles: We Need Knowledge TechnologiesMark A. Musen. 530-532 [doi]
• Iterative Document Retrieval via Deep Learning Approaches for Biomedical Question AnsweringIbrahim Burak Özyurt, Jeffrey S. Grethe. 533-538 [doi]
• Incorporating New Concepts Into the Scientific Variables OntologyMaria Stoica, Scott D. Peckham. 539-540 [doi]
• Data Science Model Curriculum Implementation for Various Types of Big Data Infrastructure CoursesTomasz Wiktorski, Yuri Demchenko, Oleg Chertov. 541-547 [doi]
• Teaching DevOps and Cloud Based Software Engineering in University CurriculaYuri Demchenko, Zhiming Zhao, Jayachander Surbiryala, Spiros Koulouzis, Zeshun Shi, Xiaofeng Liao, Jelena Gordiyenko. 548-552 [doi]
• EDISON Data Science Framework (EDSF) Extension to Address Transversal Skills Required by Emerging Industry 4.0 TransformationYuri Demchenko, Tomasz Wiktorski, Juan Cuadrado Gallego, Steve Brewer. 553-559 [doi]
• Active Provenance for Data-Intensive Workflows: Engaging Users and DevelopersAlessandro Spinuso, Malcolm P. Atkinson, Federica Magnoni. 560-569 [doi]
• Modeling and Matching Digital Data Marketplace PoliciesSara Shakeri, Valentina Maccatrozzo, Lourens Veen, Rena Bakhshi, Leon Gommans, Cees de Laat, Paola Grosso. 570-577 [doi]
• DARE: A Reflective Platform Designed to Enable Agile Data-Driven Research on the CloudIraklis A. Klampanos, Federica Magnoni, Emanuele Casarotti, Christian Pagé, Mike Lindner, Andreas Ikonomopoulos, Vangelis Karkaletsis, Athanasios Davvetas, André Gemünd, Malcolm P. Atkinson, Antonios Koukourikos, Rosa Filgueira, Amrey Krause, Alessandro Spinuso, Angelos Charalambidis. 578-585 [doi]
• Ease Access to Climate Simulations for Researchers: IS-ENES Climate4ImpactChristian Pagé, Wim Som de Cerff, Maarten Plieger, Alessandro Spinuso, Xavier Pivan. 586-587 [doi]
• Managing Scientific Literature with Software from the PORTAL-DOORS ProjectShiladitya Dutta, Pooja Kowshik, Adarsh Ambati, Sathvik Nori, S. Koby Taswell, Carl Taswell. 588-593 [doi]
• Towards a Computer-Interpretable Actionable Formal Model to Encode Data Governance RulesRui Zhao, Malcolm Atkinson. 594-603 [doi]
• Towards a New Paradigm for Programming Scientific WorkflowsReginald Cushing, Onno Valkering, Adam Belloum, Cees de Laat. 604-608 [doi]
• Bridging Concepts and Practice in eScience via Simulation-Driven EngineeringRafael Ferreira da Silva, Henri Casanova, Ryan Tanaka, Frédéric Suter. 609-614 [doi]
• Accelerating Scientific Discovery with SCAIGATE Science GatewayChao Jiang, David Ojika, Bhavesh Patel, Ann Gordon-Ross, Herman Lam. 615-616 [doi]
• The Engagement and Performance Operations Center: EPOCEdward Moynihan, Jennifer M. Schopf, Jason Zurawski. 617-618 [doi]
• Streaming Graph Ingestion with Resource-Aware Buffering and Graph CompressionSubhasis Dasgupta, Aditya Bagchi, Amarnath Gupta. 619-620 [doi]
• Streaming Workflows on Edge Devices to Process Sensor Data on a Smart Manufacturing PlatformPrakashan Korambath, Haresh Malkani, Jim Davis. 621-622 [doi]
• Enabling Transparent Access to Heterogeneous Architectures for IS-ENES Climate4Impact using the DARE PlatformChristian Pagé, Wim Som de Cerff, Maarten Plieger, Alessandro Spinuso, Xavier Pivan. 623-626 [doi]
• Predicting Eating Events in Free Living IndividualsJiue-An Yang, Jiayi Wang, Supun Nakandala, Arun Kumar, Marta M. Jankowska. 627-629 [doi]
• Support for HTCondor high-Throughput Computing Workflows in the REANA Reusable Analysis PlatformRokas Maciulaitis, Tibor Simko, Paul R. Brenner, Scott Hampton, Michael D. Hildreth, Kenyi Paolo Hurtado Anampa, Irena Johnson, Cody Kankel, Jan Okraska, Diego Rodriguez. 630-631 [doi]
• Effective Digital Object Access and Sharing Over a Networked Environment using DOIP and NDNCas Fahrenfort, Zhiming Zhao. 632-633 [doi]
• Contextual Linking between Workflow Provenance and System Performance LogsElias el Khaldi Ahanach, Spiros Koulouzis, Zhiming Zhao. 634-635 [doi]
• A Historical Big Data Analysis to Understand the Social Construction of Juvenile Delinquency in the United StatesSandeep Puthanveetil Satheesan, Alan B. Craig, Yu Zhang. 636-637 [doi]
• Workflow Automation in Liquid Chromatography Mass SpectrometryReinhard Gentz, Héctor García Martín, Edward Baidoo, Sean Peisert. 638-639 [doi]
• A Vision Towards Future eScienceShinji Shimojo, Susumu Date. 640-641 [doi]
• HUBzero© Goes OneSciencePlace: The Next Community-Driven Steps for Providing Software-as-a-ServiceDavid Benham, Sandra Gesing. 642-643 [doi]
• Sharing and Archiving Data Science Course Projects to Support Pedagogy for Future CohortsStephanie Labou, Ho Jung Yoo, David Minor, Ilkay Altintas. 644-645 [doi]
• Expanding Library Resources for Data and Compute-Intensive Education and ResearchStephanie Labou, Reid Otsuji. 646-647 [doi]
• Predicting Eating Events in Free Living IndividualsJiue-An Yang, Jiayi Wang, Supun Nakandala, Arun Kumar, Marta M. Jankowska. 648-649 [doi]
• A Survey of Scalable Deep Learning FrameworksSaba Amiri, Sara Salimzadeh, A. S. Z. Belloum. 650-651 [doi]
• Enabling Server-Based Computing and FAIR Data Sharing with the ENES Climate Analytics ServiceSofiane Bendoukha, Tobias Weigel, Sandro Fiore, Donatello Elia. 651-653 [doi]