Abstract is missing.
- Improving the Quality of Automatic DNA Sequence Assembly Using Fluorescent Trace-Data ClassificationsCarolyn F. Allex, Schuyler F. Baldwin, Jude W. Shavlik, Frederick R. Blattner. 3-14
- The Megaprior Heuristic for Discovering Protein Sequence PatternsTimothy L. Bailey, Michael Gribskov. 15-24
- From Electron Density and Sequence to Structure: Integrating Protein Image Analysis and Threading for Structure DeterminationKim Baxter, Evan W. Steeg, Richard H. Lathrop, Janice I. Glasgow, Suzanne Fortier. 25-33
- Discovering Patterns and Subfamilies in BiosequencesAlvis Brazma, Inge Jonassen, Esko Ukkonen, Jaak Vilo. 34-43
- A Sequence Similarity Search Algorithm Based on a Probabilistic Interpretation of an Alignment Scoring SystemPhilipp Bucher, Kay Hofmann. 44-51
- The Mathematical Model of Subtractive Hybridization and Its Practical ApplicationOlga D. Ermolaeva, Sergey A. Lukyanov, Eugene D. Sverdlov. 52-58
- Using Iterative Dynamic Programming to Obtain Accurate Pairwise and Multiple Alignments of Protein StructuresMark Gerstein, Michael Levitt. 59-67
- GeneFisher-Software Support for the Detection of Postulated GenesRobert Giegerich, Folker Meyer, Chris Schleiermacher. 68-77
- Ontological Foundations for Biology Knowledge ModelsCarole D. Hafner, Natalya Fridman Noy. 78-87
- Good Maps Are StraightEric Harley, Anthony J. Bonner, Nathan Goodman. 88-97
- A Top-Down Approach to Whole Genome VisualizationKlaus Heumann, C. Harris, Hans-Werner Mewes. 98-108
- A Probabilistic Classification System for Predicting the Cellular Localization Sites of ProteinsPaul Horton, Kenta Nakai. 109-115
- HinCyc: A Knowledge Base of the Complete Genome and Metabolic Pathways of H. influenzaePeter D. Karp, Christos A. Ouzounis, Suzanne M. Paley. 116-124
- Inferring Relatedness of a Macromolecule to a Sequence Database Without SequencingJin Kim, James R. Cole, Eric Torng, Sakti Pramanik. 125-133
- A Generalized Hidden Markov Model for the Recognition of Human Genes in DNADavid Kulp, David Haussler, Martin G. Reese, Frank H. Eeckman. 134-142
- A Grammar-Based Unification of Several Alignment and Folding AlgorithmsFabrice Lefebvre. 143-154
- Parameterization Studies for the SAM and HMMER Methods of Hidden Markov Model GenerationMarcella A. McClure, Chris Smith, Pete Elton. 155-164
- Applications of GeneMark in Multispecies EnvironmentsJames D. McIninch, William S. Hayes, Mark Borodovsky. 165-175
- Genome-Scale DNA Sequence Recognition by Hybridization to Short OligomersAleksandar Milosavljevic, Suzana Savkovic, Radomir Crkvenjakov, David Salbego, Hope Serrato, Heidi Kreuzer, Anne Gemmell, Shawna Batus, Danica Grujic, Susan Carnahan, Jovanka Tepavcevic. 176-181
- Characterization of Prokaryotic and Eukaryotic Promoters Using Hidden Markov ModelsAnders Gorm Pedersen, Pierre Baldi, Søren Brunak, Yves Chauvin. 182-191
- Refining Neural Network Predictions for Helical Transmembrane Proteins by Dynamic ProgrammingBurkhard Rost, Rita Casadio, Piero Fariselli. 192-200
- Finding Genes in DNA Using Decision Trees and Dynamic ProgrammingSteven Salzberg, Xin Chen, John Henderson, Kenneth H. Fasman. 201-210
- Compact Encoding Strategies for DNA Sequence Similarity SearchDavid J. States, Pankaj Agarwal. 211-217
- A Knowledge-Based Method for Protein Structure Refinement and PredictionShankar Subramaniam, David K. Tcheng, James M. Fenton. 218-229
- Discovering Empirically Conserved Amino Acid Substitution Groups in Databases of Protein FamiliesThomas D. Wu, Douglas L. Brutlag. 230-240
- Gene Prediction by Pattern Recognition and Homology SearchYing Xu, Edward C. Uberbacher. 241-251
- Gene Recognition in Cyanobacterium Genomic Sequence Data Using the Hidden Markov ModelTetsushi Yada, Makoto Hirosawa. 252-260