Vladimir Brusic - researchr alias

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2010

Using Gaussian Process with Test Rejection to Detect T-Cell Epitopes in Pathogen GenomesLiwen You, Vladimir Brusic, Marcus Gallagher, Mikael Bodén. tcbb, 7(4):741-751, 2010. [doi]

2009

2008

Critical technologies for bioinformaticsVladimir Brusic, Shoba Ranganathan. bib, 9(4):261-262, 2008. [doi]

Evaluation of MHC-II peptide binding prediction servers: applications for vaccine researchHong Huang Lin, Guang Lan Zhang, Songsak Tongchusak, Ellis L. Reinherz, Vladimir Brusic. bmcbi, 9(S-12), 2008. [doi]

Identification of human-to-human transmissibility factors in PB2 proteins of influenza A by large-scale mutual information analysisOlivo Miotto, A. T. Heiny, Tin Wee Tan, J. Thomas August, Vladimir Brusic. bmcbi, 9(S-1), 2008. [doi]

Rule-based knowledge aggregation for large-scale protein sequence analysis of influenza A virusesOlivo Miotto, Tin Wee Tan, Vladimir Brusic. bmcbi, 9(S-1), 2008. [doi]

Hotspot Hunter: a computational system for large-scale screening and selection of candidate immunological hotspots in pathogen proteomesGuanglan Zhang, Asif M. Khan, Kellathur N. Srinivasan, A. T. Heiny, Kenneth X. Lee, Chee Keong Kwoh, J. Thomas August, Vladimir Brusic. bmcbi, 9(S-1), 2008. [doi]

A Hybrid Model for Prediction of Peptide Binding to MHC MoleculesPing Zhang, Vladimir Brusic, Kaye E. Basford. iconip 2009: 529-536 [doi]

2007

The growth of bioinformaticsVladimir Brusic. bib, 8(2):69-70, 2007. [doi]

Predicting peptides binding to MHC class II molecules using multi-objective evolutionary algorithmsMenaka Rajapakse, Bertil Schmidt, Lin Feng, Vladimir Brusic. bmcbi, 8, 2007. [doi]

Understanding Prediction Systems for HLA-Binding Peptides and T-Cell Epitope IdentificationLiwen You, Ping Zhang, Mikael Bodén, Vladimir Brusic. prib 2007: 337-348 [doi]

2006

Extreme Learning Machine for Predicting HLA-Peptide BindingStephanus Daniel Handoko, Chee Keong Kwoh, Yew-Soon Ong, Guanglan Zhang, Vladimir Brusic. isnn 2006: 716-721 [doi]

Large-scale analysis of antigenic diversity of T-cell epitopes in dengue virusAsif M. Khan, A. T. Heiny, Kenneth X. Lee, Kellathur N. Srinivasan, Tin Wee Tan, J. Thomas August, Vladimir Brusic. bmcbi, 7(S-5), 2006. [doi]

Incremental Maintenance of Biological Databases Using Association Rule MiningKai-Tak Lam, Judice L. Y. Koh, Bharadwaj Veeravalli, Vladimir Brusic. prib 2006: 140-150 [doi]

Multi-Objective Evolutionary Algorithm for Discovering Peptide Binding MotifsMenaka Rajapakse, Bertil Schmidt, Vladimir Brusic. evoW 2006: 149-158 [doi]

Functional Prediction of Snake NeurotoxinsSeng Hong Seah, Chee Keong Kwoh, Vladimir Brusic, Meena Kishore Sakharkar, Geok See Ng. icarcv 2006: 1-4 [doi]

Prediction of HLA-DQ3.2ß Ligands: evidence of multiple registers in class II binding peptidesJoo Chuan Tong, Guanglan Zhang, Tin Wee Tan, J. Thomas August, Vladimir Brusic, Shoba Ranganathan. bioinformatics, 22(10):1232-1238, 2006. [doi]

2005

Predictive Vaccinology: Optimisation of Predictions Using Support Vector Machine ClassifiersIvana Bozic, Guanglan Zhang, Vladimir Brusic. ideal 2005: 375-381 [doi]

Extraction by Example: Induction of Structural Rules for the Analysis of Molecular Sequence Data from Heterogeneous SourcesOlivo Miotto, Tin Wee Tan, Vladimir Brusic. ideal 2005: 398-405 [doi]

Deriving Matrix of Peptide-MHC Interactions in Diabetic Mouse by Genetic AlgorithmMenaka Rajapakse, Lonce L. Wyse, Bertil Schmidt, Vladimir Brusic. ideal 2005: 440-447 [doi]

Neural Models for Predicting Viral Vaccine TargetsGuanglan Zhang, Asif M. Khan, Kellathur N. Srinivasan, J. Thomas August, Vladimir Brusic. jbcb, 3(5):1207-1226, 2005. [doi]

MULTIPRED: a computational system for prediction of promiscuous HLA binding peptidesGuanglan Zhang, Asif M. Khan, Kellathur N. Srinivasan, J. Thomas August, Vladimir Brusic. nar, 33(Web-Server-Issue):172-179, 2005. [doi]

PRED:::BALB/c:::: a system for the prediction of peptide binding to H2:::d::: molecules, a haplotype of the BALB/c mouseGuanglan Zhang, Kellathur N. Srinivasan, Anitha Veeramani, J. Thomas August, Vladimir Brusic. nar, 33(Web-Server-Issue):180-183, 2005. [doi]

2004

ANTIMIC: a database of antimicrobial sequencesManisha Brahmachary, S. P. T. Krishnan, Judice L. Y. Koh, Asif M. Khan, Seng Hong Seah, Tin Wee Tan, Vladimir Brusic, Vladimir B. Bajic. nar, 32(Database-Issue):586-589, 2004.

CysView: protein classification based on cysteine pairing patternsJohann Lenffer, Paulo Lai, Wafaa El Mejaber, Asif M. Khan, Judice L. Y. Koh, Paul T. J. Tan, Seng Hong Seah, Vladimir Brusic. nar, 32(Web-Server-Issue):350-355, 2004.

Systematic analysis of snake neurotoxins functional classification using a data warehousing approachJoyce Phui Yee Siew, Asif M. Khan, Paul T. J. Tan, Judice L. Y. Koh, Seng Hong Seah, Chuay Yeng Koo, Siaw Ching Chai, Arunmozhiarasi Armugam, Vladimir Brusic, Kandiah Jeyaseelan. bioinformatics, 20(18):3466-3480, 2004. [doi]

Prediction of class I T-cell epitopes: evidence of presence of immunological hot spots inside antigensKellathur N. Srinivasan, Guanglan Zhang, Asif M. Khan, J. Thomas August, Vladimir Brusic. ismb 2004: 297-302 [doi]

2003

2002

2000

FIMM, a database of functional molecular immunologyChristian Schönbach, Judice L. Y. Koh, Xin Sheng, Limsoon Wong, Vladimir Brusic. nar, 28(1):222-224, 2000.

Data Warehousing in Molecular BiologyChristian Schönbach, P. Kowalski-Saunders, Vladimir Brusic. bib, 1(1):190-198, 2000.

1998

1997

Application of Genetic Search in Derivation of Matrix Models of Peptide Binding to MHC MoleculesVladimir Brusic, Christian Schönbach, Masafumi Takiguchi, Victor Ciesielski, Leonard C. Harrison. ismb 1997: 75-83

MHCPEP, a database of MHC-binding peptides: update 1996Vladimir Brusic, George B. Rudy, Anthony P. Kyne, Leonard C. Harrison. nar, 25(1):269-271, 1997.

1996

MHCPEP--a database of MHC-binding peptides: update 1995Vladimir Brusic, George B. Rudy, Anthony P. Kyne, Leonard C. Harrison. nar, 24(1):242-244, 1996.