Frank Alber - researchr alias

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Viewing Publication 1 - 10 from 10

2016

Simulating cryo electron tomograms of crowded cell cytoplasm for assessment of automated particle pickingLong Pei, Min Xu, Zachary Frazier, Frank Alber. bmcbi, 17:405, 2016. [doi]

2015

Hi-Corrector: a fast, scalable and memory-efficient package for normalizing large-scale Hi-C dataWenyuan Li, Ke Gong, Qingjiao Li, Frank Alber, Xianghong Jasmine Zhou. bioinformatics, 31(6):960-962, 2015. [doi]

2013

Automated target segmentation and real space fast alignment methods for high-throughput classification and averaging of crowded cryo-electron subtomogramsMin Xu, Frank Alber. bioinformatics, 29(13):274-282, 2013. [doi]

2012

A Computational Approach to Increase Time Scales in Brownian Dynamics-Based Reaction-Diffusion ModelingZachary Frazier, Frank Alber. jcb, 19(6):606-618, 2012. [doi]

High precision alignment of cryo-electron subtomograms through gradient-based parallel optimizationMin Xu, Frank Alber. bmcsb, 6(S-1), 2012. [doi]

2011

Template-free detection of macromolecular complexes in cryo electron tomogramsMin Xu, Martin Beck, Frank Alber. bioinformatics, 27(13):69-76, 2011. [doi]

2010

A fast mathematical programming procedure for simultaneous fitting of assembly components into cryoEM density mapsShihua Zhang, Daven Vasishtan, Min Xu, Maya Topf, Frank Alber. bioinformatics, 26(12):261-268, 2010. [doi]

2009

3D Rotation Invariant Features for the Characterization of Molecular Density MapsMin Xu, Shihua Zhang, Frank Alber. bibm 2009: 74-78 [doi]

2008

Integrative Structure Determination of Protein Assemblies by Satisfaction of Spatial RestraintsFrank Alber, Brian T. Chait, Michael P. Rout, Andrej Sali. In Anna R. Panchenko, Teresa M. Przytycka, editors, Protein-protein Interactions and Networks: Identification, Computer Analysis, and Prediction. Volume 9 of Computational Biology, pages 99-114, Springer, 2008. [doi]

2006

Structural Modeling of Protein Interactions by Analogy: Application to PSD-95Dmitry Korkin, Fred P. Davis, Frank Alber, Tinh Luong, Min-Yi Shen, Vladan Lucic, Mary B. Kennedy, Andrej Sali. ploscb, 2(11), 2006. [doi]

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