Hisanori Kiryu - researchr alias

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2022

MODEC: an unsupervised clustering method integrating omics data for identifying cancer subtypesYanting Zhang, Hisanori Kiryu. bib, 23(6), 2022. [doi]

2020

Estimation of population genetic parameters using an EM algorithm and sequence data from experimental evolution populationsYasuhiro Kojima, Hirotaka Matsumoto, Hisanori Kiryu. bioinformatics, 36(1):221-231, 2020. [doi]

2019

reactIDR: evaluation of the statistical reproducibility of high-throughput structural analyses towards a robust RNA structure predictionRisa Kawaguchi, Hisanori Kiryu, Junichi Iwakiri, Jun Sese. bmcbi, 20-S(3):15-24, 2019. [doi]

TMRS: an algorithm for computing the time to the most recent substitution event from a multiple alignment columnHisanori Kiryu, Yuto Ichikawa, Yasuhiro Kojima. almob, 14(1), 2019. [doi]

2017

SCODE: an efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiationHirotaka Matsumoto, Hisanori Kiryu, Chikara Furusawa, Minoru S. H. Ko, Shigeru B. H. Ko, Norio Gouda, Tetsutaro Hayashi, Itoshi Nikaido. bioinformatics, 33(15):2314-2321, 2017. [doi]

2016

2012

Rchange: algorithms for computing energy changes of RNA secondary structures in response to base mutationsHisanori Kiryu, Kiyoshi Asai. bioinformatics, 28(8):1093-1101, 2012. [doi]

2011

Sufficient statistics and expectation maximization algorithms in phylogenetic tree modelsHisanori Kiryu. bioinformatics, 27(17):2346-2353, 2011. [doi]

A detailed investigation of accessibilities around target sites of siRNAs and miRNAsHisanori Kiryu, Goro Terai, Osamu Imamura, Hiroyuki Yoneyama, Kenji Suzuki, Kiyoshi Asai. bioinformatics, 27(13):1788-1797, 2011. [doi]

2009

2008

2007

Robust prediction of consensus secondary structures using averaged base pairing probability matricesHisanori Kiryu, Taishin Kin, Kiyoshi Asai. bioinformatics, 23(4):434-441, 2007. [doi]

Murlet: a practical multiple alignment tool for structural RNA sequencesHisanori Kiryu, Yasuo Tabei, Taishin Kin, Kiyoshi Asai. bioinformatics, 23(13):1588-1598, 2007. [doi]

2005

Extracting relations between promoter sequences and their strengths from microarray dataHisanori Kiryu, Taku Oshima, Kiyoshi Asai. bioinformatics, 21(7):1062-1068, 2005. [doi]

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