Jochen Supper - researchr alias

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Viewing Publication 1 - 18 from 18

2012

2010

Optimal selection of epitopes for TXP-immunoaffinity mass spectrometryHannes Planatscher, Jochen Supper, Oliver Poetz, Dieter Stoll, Thomas Joos, Markus F. Templin, Andreas Zell. almob, 5:28, 2010. [doi]

2009

2008

SBMLsqueezer: A CellDesigner plug-in to generate kinetic rate equations for biochemical networksAndreas Dräger, Nadine Hassis, Jochen Supper, Adrian Schröder, Andreas Zell. bmcsb, 2:39, 2008. [doi]

Modeling gene regulation and spatial organization of sequence based motifsJochen Supper, C. A. Kampe, Dierk Wanke, K. W. Berendzen, Klaus Harter, R. Bonneau, Andreas Zell. bibe 2008: 1-7 [doi]

2007

Comparing various evolutionary algorithms on the parameter optimization of the valine and leucine biosynthesis in corynebacterium glutamicumAndreas Dräger, Jochen Supper, Hannes Planatscher, Jørgen B. Magnus, Marco Oldiges, Andreas Zell. cec 2007: 620-627 [doi]

Benchmarking evolutionary algorithms on convenience kinetics modelsof the valine and leucine biosynthesis in C. glutamicumAndreas Dräger, Marcel Kronfeld, Jochen Supper, Hannes Planatscher, Jørgen B. Magnus, Marco Oldiges, Andreas Zell. cec 2007: 896-903 [doi]

A Two-Step Clustering for 3-D Gene Expression Data Reveals the Main Features of the Arabidopsis Stress ResponseMartin Strauch, Jochen Supper, Christian Spieth, Dierk Wanke, Joachim Kilian, Klaus Harter, Andreas Zell. jib, 4(1), 2007. [doi]

Reconstructing Linear Gene Regulatory NetworksJochen Supper, Christian Spieth, Andreas Zell. evoW 2007: 270-279 [doi]

Gene Regulatory Network Inference via Regression Based Topological RefinementJochen Supper, Holger Fröhlich, Andreas Zell. apbc 2007: 267-276 [doi]

Inferring Gene Regulatory Networks by Machine Learning MethodsJochen Supper, Holger Fröhlich, Christian Spieth, Andreas Dräger, Andreas Zell. apbc 2007: 247-256 [doi]

EDISA: extracting biclusters from multiple time-series of gene expression profilesJochen Supper, Martin Strauch, Dierk Wanke, Klaus Harter, Andreas Zell. bmcbi, 8, 2007. [doi]

2006

JCell - a Java-based framework for inferring regulatory networks from time series dataChristian Spieth, Jochen Supper, Felix Streichert, Nora Speer, Andreas Zell. bioinformatics, 22(16):2051-2052, 2006. [doi]

2005

Feedback Memetic Algorithms for Modeling Gene Regulatory NetworksChristian Spieth, Felix Streichert, Jochen Supper, Nora Speer, Andreas Zell. cibcb 2005: 61-67

Analysis of MHC-Peptide Binding Using Amino Acid Property-Based Decision RulesJochen Supper, Pierre Dönnes, Oliver Kohlbacher. icapr 2005: 446-453 [doi]

Reverse Engineering Non-Linear Gene Regulatory Networks Based on the Bacteriophage lambda cI CircuitJochen Supper, Christian Spieth, Andreas Zell. cibcb 2005: 325-332

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