Keith A. Crandall - researchr alias

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Viewing Publication 1 - 15 from 15

2022

Synergies between centralized and federated approaches to data quality: a report from the national COVID cohort collaborativeEmily R. Pfaff, Andrew T. Girvin, Davera Gabriel, Kristin Kostka, Michele Morris, Matvey B. Palchuk, Harold P. Lehmann, Benjamin Amor, Mark Bissell, Katie R. Bradwell, Sigfried Gold, Stephanie S. Hong, Johanna Loomba, Amin Manna, Julie A. McMurry, Emily Niehaus, Nabeel Qureshi, Anita Walden, Xiaohan Tanner Zhang, Richard L. Zhu, Richard A. Moffitt, Christopher G. Chute, William G. Adams, Shaymaa Al-Shukri, Alfred Anzalone, Ahmad Baghal, Tellen D. Bennett, Elmer V. Bernstam, Mark M. Bissell, Brian Bush, Thomas R. Campion Jr., Victor Castro, Jack Chang, Deepa D. Chaudhari, Wenjin Chen, San Chu, James J. Cimino, Keith A. Crandall, Mark Crooks, Sara J. Deakyne Davies, John Dipalazzo, David Dorr, Dan Eckrich, Sarah E. Eltinge, Daniel G. Fort, George Golovko, Snehil Gupta, Melissa A. Haendel, Janos G. Hajagos, David A. Hanauer, Brett M. Harnett, Ronald Horswell, Nancy Huang, Steven G. Johnson, Michael Kahn, Kamil Khanipov, Curtis Kieler, Katherine Ruiz De Luzuriaga, Sarah Maidlow, Ashley Martinez, Jomol Mathew, James C. McClay, Gabriel McMahan, Brian Melancon, Stéphane M. Meystre, Lucio Miele, Hiroki Morizono, Ray Pablo, Lav Patel, Jimmy Phuong, Daniel J. Popham, Claudia P. Pulgarin, Carlos Santos, Indra Neil Sarkar, Nancy Sazo, Soko Setoguchi, Selvin Soby, Sirisha Surampalli, Christine Suver, Uma Maheswara Reddy Vangala, Shyam Visweswaran, James von Oehsen, Kellie M. Walters, Laura Wiley, David A. Williams, Adrian H. Zai. jamia, 29(4):609-618, 2022. [doi]

2021

Each patient is a research biorepository: informatics-enabled research on surplus clinical specimens via the living BioBankAlexander V. Alekseyenko, Bashir Hamidi, Trevor D. Faith, Keith A. Crandall, Jennifer G. Powers, Christopher Metts, James E. Madory, Steven L. Carroll, Jihad S. Obeid, Leslie A. Lenert. jamia, 28(1):138-143, 2021. [doi]

COVID-19 biomarkers and their overlap with comorbidities in a disease biomarker data modelNikhita Gogate, Daniel Lyman, Amanda Bell, Edmund Cauley, Keith A. Crandall, Ashia Joseph, Robel Y. Kahsay, Darren A. Natale, Lynn M. Schriml, Sabyasach Sen, Raja Mazumder. bib, 22(6), 2021. [doi]

Omics community detection using multi-resolution clusteringAli Rahnavard, Suvo Chatterjee, Bahar Sayoldin, Keith A. Crandall, Fasil Tekola-Ayele, Himel Mallick. bioinformatics, 37(20):3588-3594, 2021. [doi]

2020

ReQTL: identifying correlations between expressed SNVs and gene expression using RNA-sequencing dataLiam F. Spurr, Nawaf Alomran, Pavlos Bousounis, Dacian Reece-Stremtan, N. M. Prashant, Hongyu Liu, Piotr Slowinski, Muzi Li, Qianqian Zhang, Justin Sein, Gabriel Asher, Keith A. Crandall, Krasimira Tsaneva-Atanasova, Anelia Horvath. bioinformatics, 36(5):1351-1359, 2020. [doi]

2019

Telescope: Characterization of the retrotranscriptome by accurate estimation of transposable element expressionMatthew L. Bendall, Miguel de Mulder, Luis Pedro Iñiguez, Aarón Lecanda-Sánchez, Marcos Pérez-Losada, Mario A. Ostrowski, R. Brad Jones, Lubbertus C. F. Mulder, Gustavo Reyes-Terán, Keith A. Crandall, Christopher E. Ormsby, Douglas F. Nixon. ploscb, 15(9), 2019. [doi]

2017

2014

2012

Phylogenetic search through partial tree mixingKenneth Sundberg, Mark J. Clement, Quinn Snell, Dan Ventura, Michael Whiting, Keith A. Crandall. bmcbi, 13(S-13), 2012. [doi]

2006

Jumpstarting phylogenetic analysisJesse Mecham, Mark J. Clement, Quinn Snell, Todd Freestone, Kevin D. Seppi, Keith A. Crandall. ijbra, 2(1):19-35, 2006. [doi]

2003

TreeSAAP: Selection on Amino Acid Properties using phylogenetic treesSteve Woolley, Justin Johnson, Matthew J. Smith, Keith A. Crandall, David A. McClellan. bioinformatics, 19(5):671-672, 2003.

2002

TCS: Estimating Gene GenealogiesMark J. Clement, Quinn Snell, Peter Walker, David Posada, Keith A. Crandall. ipps 2002: [doi]

1998

MODELTEST: testing the model of DNA substitutionDavid Posada, Keith A. Crandall. bioinformatics, 14(9):817-818, 1998.

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