Michel F. Sanner - researchr alias

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Viewing Publication 1 - 23 from 23

2023

Predicting Protein-Peptide Interactions: Benchmarking Deep Learning Techniques and a Comparison with Focused DockingSudhanshu Shanker, Michel F. Sanner. jcisd, 63(10):3158-3170, May 2023. [doi]

2021

Cyclic Peptides as Protein Kinase Inhibitors: Structure-Activity Relationship and Molecular ModelingMichel F. Sanner, Khalid Zoghebi, Samara Hanna, Saghar Mozaffari, Simin Rahighi, Rakesh K. Tiwari, Keykavous Parang. jcisd, 61(6):3015-3026, 2021. [doi]

Improving Docking Power for Short Peptides Using Random ForestMichel F. Sanner, Leonard Dieguez, Stefano Forli, Ewa Lis. jcisd, 61(6):3074-3090, 2021. [doi]

2020

Mesoscope: A Web-based Tool for Mesoscale Data Integration and CurationLudovic Autin, Martina Maritan, Brett A. Barbaro, Adam Gardner, Arthur J. Olson, Michel F. Sanner, David S. Goodsell. molva-ws 2020: 23-31 [doi]

2019

AutoDock CrankPep: combining folding and docking to predict protein-peptide complexesYuqi Zhang, Michel F. Sanner. bioinformatics, 35(24):5121-5127, 2019. [doi]

AutoGridFR: Improvements on AutoDock Affinity Maps and Associated Software ToolsYuqi Zhang, Stefano Forli, Anna Omelchenko, Michel F. Sanner. jcc, 40(32):2882-2886, 2019. [doi]

2016

AutoSite: an automated approach for pseudo-ligands prediction - from ligand-binding sites identification to predicting key ligand atomsPradeep Anand Ravindranath, Michel F. Sanner. bioinformatics, 32(20):3142-3149, 2016. [doi]

2015

AutoDockFR: Advances in Protein-Ligand Docking with Explicitly Specified Binding Site FlexibilityPradeep Anand Ravindranath, Stefano Forli, David S. Goodsell, Arthur J. Olson, Michel F. Sanner. ploscb, 11(12), 2015. [doi]

2012

uPy: A Ubiquitous CG Python API with Biological-Modeling ApplicationsLudovic Autin, Graham Johnson, Johan Hake, Arthur J. Olson, Michel F. Sanner. cga, 32(5):50-61, 2012. [doi]

2009

AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibilityGarrett M. Morris, Ruth Huey, William Lindstrom, Michel F. Sanner, Richard K. Belew, David S. Goodsell, Arthur J. Olson. jcc, 30(16):2785-2791, 2009. [doi]

2008

Services Oriented Architecture for Managing Workflows of Avian Flu GridLuca Clementi, Sriram Krishnan, Wesley Goodman, Jingyuan Ren, Wilfred W. Li, Peter W. Arzberger, Guillaume Vareille, Sargis Dallakyan, Michel F. Sanner. eScience 2008: 582-589 [doi]

Protein-ligand docking with multiple flexible side chainsYong Zhao, Michel F. Sanner. jcamd, 22(9):673-679, 2008. [doi]

2006

2005

Tangible Augmented Interfaces for Structural Molecular BiologyAlexandre Gillet, Michel F. Sanner, Daniel Stoffler, Arthur J. Olson. cga, 25(2):13-17, 2005. [doi]

2004

Computer-linked autofabricated 3D models for teaching structural biologyAlexandre Gillet, Suzanne Weghorst, William Winn, Daniel Stoffler, Michel F. Sanner, David S. Goodsell, Arthur J. Olson. siggraph 2004: 28 [doi]

Augmented Reality with Tangible Auto-Fabricated Models for Molecular Biology ApplicationsAlexandre Gillet, Michel F. Sanner, Daniel Stoffler, David S. Goodsell, Arthur J. Olson. visualization 2004: 235-242 [doi]

2003

Role of Haptics in Teaching Structural Molecular BiologGanesh Sankaranarayanan, Suzanne Weghorst, Michel F. Sanner, Alexandre Gillet, Arthur J. Olson. haptics 2003: 363-366 [doi]

Integrating Biomolecular Analysis and Visual Programming: Flexibility and Interactivity in the Design of Bioinformatics ToolsDaniel Stoffler, Sophie I. Coon, Ruth Huey, Arthur J. Olson, Michel F. Sanner. hicss 2003: 275 [doi]

1999

Integrating Computation and Visualization for Biomolecular Analysis: An Example Using Python and AVSMichel F. Sanner, Bruce S. Duncan, C. J. Carrillo, Arthur J. Olson. psb 1999: 401-412 [doi]

1996

Lattice modeling: Accuracy of energy calculationsBoris A. Reva, Michel F. Sanner, Arthur J. Olson, Alexei V. Finkelstein. jcc, 17(8):1025-1032, 1996. [doi]

1995

Fast and Robust Computation of Molecular SurfacesMichel F. Sanner, Arthur J. Olson, Jean-Claude Spehner. compgeom 1995: [doi]

1989

GEOM: A new tool for molecular modelling based on distance geometry calculations with NMR dataMichel F. Sanner, Armin Widmer, Hans Senn, Werner Braun. jcamd, 3(3):195-210, 1989. [doi]

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