Oznur Tastan - researchr alias

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Viewing Publication 1 - 24 from 24

2025

SCITUNA: single-cell data integration tool using network alignmentAissa Houdjedj, Yacine Marouf, Mekan Myradov, Süleyman Onur Dogan, Burak Onur Erten, Oznur Tastan, Cesim Erten, Hilal Kazan. bmcbi, 26(1):92, December 2025. [doi]

2023

DeepSide: A Deep Learning Approach for Drug Side Effect PredictionOnur Can Uner, Halil Ibrahim Kuru, Ramazan Gokberk Cinbis, Oznur Tastan, A. Ercüment Çiçek. tcbb, 20(1):330-339, January - February 2023. [doi]

2022

MatchMaker: A Deep Learning Framework for Drug Synergy PredictionHalil Ibrahim Kuru, Oznur Tastan, A. Ercument Cicek. tcbb, 19(4):2334-2344, 2022. [doi]

miRCoop: Identifying Cooperating miRNAs via Kernel Based Interaction TestsGulden Olgun, Oznur Tastan. tcbb, 19(3):1760-1771, 2022. [doi]

Uncovering complementary sets of variants for predicting quantitative phenotypesSerhan Yilmaz, Mohamad Fakhouri, Mehmet Koyutürk, A. Ercüment Çiçek, Oznur Tastan. bioinformatics, 38(4):908-917, 2022. [doi]

2021

A Tool for Detecting Complementary Single Nucleotide Polymorphism Pairs in Genome-Wide Association Studies for Epistasis TestingGizem Caylak, Oznur Tastan, A. Ercument Cicek. jcb, 28(4):378-380, 2021. [doi]

Potpourri: An Epistasis Test Prioritization Algorithm via Diverse SNP SelectionGizem Caylak, Oznur Tastan, A. Ercument Cicek. jcb, 28(4):365-377, 2021. [doi]

PRER: A patient representation with pairwise relative expression of proteins on biological networksHalil Ibrahim Kuru, Mustafa Buyukozkan, Oznur Tastan. ploscb, 17(5), 2021. [doi]

Correction to: NoRCE: non‑coding RNA sets cis enrichment toolGulden Olgun, Afshan Nabi, Oznur Tastan. bmcbi, 22(1):393, 2021. [doi]

NoRCE: non-coding RNA sets cis enrichment toolGulden Olgun, Afshan Nabi, Oznur Tastan. bmcbi, 22(1):294, 2021. [doi]

PAMOGK: a pathway graph kernel-based multiomics approach for patient clusteringYasin Ilkagan Tepeli, Ali Burak Ünal, Furkan Mustafa Akdemir, Oznur Tastan. bioinformatics, 36(21):5237-5246, 2021. [doi]

SPADIS: An Algorithm for Selecting Predictive and Diverse SNPs in GWASSerhan Yilmaz, Oznur Tastan, A. Ercument Cicek. tcbb, 18(3):1208-1216, 2021. [doi]

2020

DeepKinZero: zero-shot learning for predicting kinase-phosphosite associations involving understudied kinasesIman Deznabi, Busra Arabaci, Mehmet Koyutürk, Oznur Tastan. bioinformatics, 36(12):3652-3661, 2020. [doi]

Functional Enrichment Analysis of Deregulated Long Non-Coding RNAs in Cancer Based on their Genomic NeighborsGulden Olgun, Oznur Tastan. bcb 2020: [doi]

2018

An Inference Attack on Genomic Data Using Kinship, Complex Correlations, and Phenotype InformationIman Deznabi, Mohammad Mobayen, Nazanin Jafari, Oznur Tastan, Erman Ayday. tcbb, 15(4):1333-1343, 2018. [doi]

A utility maximizing and privacy preserving approach for protecting kinship in genomic databasesGulce Kale, Erman Ayday, Oznur Tastan. bioinformatics, 34(2):181-189, 2018. [doi]

2017

GLANET: genomic loci annotation and enrichment toolBurçak Otlu, Can Firtina, Sündüz Keles, Oznur Tastan. bioinformatics, 33(18):2818-2828, 2017. [doi]

2015

Refining Literature Curated Protein Interactions Using Expert OpinionsOznur Tastan, Yanjun Qi, Jaime G. Carbonell, Judith Klein-Seetharaman. psb 2015: 318-329 [doi]

2011

Virus interactions with human signal transduction pathwaysZhongming Zhao, Junfeng Xia, Oznur Tastan, Irtisha Singh, Meghana Kshirsagar, Jaime G. Carbonell, Judith Klein-Seetharaman. ijcbdd, 4(1):83-105, 2011. [doi]

2010

2009

Communication interception of human signal transduction pathways by Human Immunodeficiency Virus-1Sivaraman Balakrishnan, Oznur Tastan, Jaime G. Carbonell, Judith Klein-Seetharaman. gensips 2009: 1-4 [doi]

Prediction of Interactions Between HIV-1 and Human Proteins by Information IntegrationOznur Tastan, Yanjun Qi, Jaime G. Carbonell, Judith Klein-Seetharaman. psb 2009: 516-527 [doi]

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