Warren A. Kibbe - researchr alias

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Viewing Publication 1 - 23 from 23

2022

Standardizing, harmonizing, and protecting data collection to broaden the impact of COVID-19 research: the rapid acceleration of diagnostics-underserved populations (RADx-UP) initiativeGabriel A. Carrillo, Michael Cohen-Wolkowiez, Emily M. D'agostino, Keith Marsolo, Lisa M. Wruck, Laura Johnson, James Topping, Al Richmond, Giselle Corbie, Warren A. Kibbe. jamia, 29(9):1480-1488, 2022. [doi]

Demonstrating an approach for evaluating synthetic geospatial and temporal epidemiologic data utility: results from analyzing >1.8 million SARS-CoV-2 tests in the United States National COVID Cohort Collaborative (N3C)Jason A. Thomas, Randi E. Foraker, Noa Zamstein, Jon D. Morrow, Philip R. O. Payne, Adam B. Wilcox, Melissa A. Haendel, Christopher G. Chute, Kenneth R. Gersing, Anita Walden, Tellen D. Bennett, David A. Eichmann, Justin Guinney, Warren A. Kibbe, Hongfang Liu, Emily R. Pfaff, Peter N. Robinson, Joel H. Saltz, Heidi Spratt, Justin Starren, Christine Suver, Chunlei Wu, Davera Gabriel, Stephanie S. Hong, Kristin Kostka, Harold P. Lehmann, Richard A. Moffitt, Michele Morris, Matvey B. Palchuk, Xiaohan Tanner Zhang, Richard L. Zhu, Benjamin Amor, Mark M. Bissell, Marshall Clark, Andrew T. Girvin, Adam M. Lee, Robert T. Miller, Kellie M. Walters, Yooree Chae, Connor Cook, Alexandra Dest, Racquel R. Dietz, Thomas Dillon, Patricia A. Francis, Rafael Fuentes, Alexis Graves, Andrew J. Neumann, Shawn T. O'Neil, Usman Sheikh, Andréa M. Volz, Elizabeth Zampino, Christopher P. Austin, Samuel Bozzette, Mariam Deacy, Nicole Garbarini, Michael G. Kurilla, Sam G. Michael, Joni L. Rutter, Meredith Temple-O'Connor, Katie Rebecca Bradwell, Amin Manna, Nabeel Qureshi, Mary Morrison Saltz, Julie A. McMurry, Carolyn Bramante, Jeremy Richard Harper, Wenndy Hernandez, Farrukh M. Koraishy, Federico Mariona, Saidulu Mattapally, Amit Saha, Satyanarayana Vedula, Yujuan Fu, Nisha Mathews, Ofer Mendelevitch. jamia, 29(8):1350-1365, 2022. [doi]

2021

Reply: Matters Arising 'Investigating sources of inaccuracy in wearable optical heart rate sensors'Brinnae Bent, Oana M. Enache, Benjamin Goldstein, Warren A. Kibbe, Jessilyn Dunn. npjdm, 4, 2021. [doi]

The National COVID Cohort Collaborative (N3C): Rationale, design, infrastructure, and deploymentMelissa A. Haendel, Christopher G. Chute, Tellen D. Bennett, David A. Eichmann, Justin Guinney, Warren A. Kibbe, Philip R. O. Payne, Emily R. Pfaff, Peter N. Robinson, Joel H. Saltz, Heidi Spratt, Christine Suver, John Wilbanks, Adam B. Wilcox, Andrew E. Williams, Chunlei Wu, Clair Blacketer, Robert L. Bradford, James J. Cimino, Marshall Clark, Evan W. Colmenares, Patricia A. Francis, Davera Gabriel, Alexis Graves, Raju Hemadri, Stephanie S. Hong, George Hripscak, Dazhi Jiao, Jeffrey G. Klann, Kristin Kostka, Adam M. Lee, Harold P. Lehmann, Lora Lingrey, Robert T. Miller, Michele Morris, Shawn N. Murphy, Karthik Natarajan, Matvey B. Palchuk, Usman Sheikh, Harold Solbrig, Shyam Visweswaran, Anita Walden, Kellie M. Walters, Griffin M. Weber, Xiaohan Tanner Zhang, Richard L. Zhu, Benjamin Amor, Andrew T. Girvin, Amin Manna, Nabeel Qureshi, Michael G. Kurilla, Sam G. Michael, Lili M. Portilla, Joni L. Rutter, Christopher P. Austin, Ken R. Gersing. jamia, 28(3):427-443, 2021. [doi]

2020

Investigating sources of inaccuracy in wearable optical heart rate sensorsBrinnae Bent, Benjamin Goldstein, Warren A. Kibbe, Jessilyn Dunn. npjdm, 3, 2020. [doi]

2015

2013

dictyBase 2013: integrating multiple Dictyostelid speciesSiddhartha Basu, Petra Fey, Yogesh Pandit, Robert Dodson, Warren A. Kibbe, Rex L. Chisholm. nar, 41(Database-Issue):676-683, 2013. [doi]

The disease and gene annotations (DGA): an annotation resource for human diseaseKai Peng, Wei Xu, Jianyong Zheng, Kegui Huang, Huisong Wang, Jiansong Tong, Zhifeng Lin, Jun Liu, Wenqing Cheng, Dong Fu, Pan Du, Warren A. Kibbe, Simon M. Lin, Tian Xia. nar, 41(Database-Issue):553-560, 2013. [doi]

2012

2011

dictyBase update 2011: web 2.0 functionality and the initial steps towards a genome portal for the AmoebozoaPascale Gaudet, Petra Fey, Siddhartha Basu, Yulia A. Bushmanova, Robert Dodson, Kerry A. Sheppard, Eric M. Just, Warren A. Kibbe, Rex L. Chisholm. nar, 39(Database-Issue):620-624, 2011. [doi]

2010

Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysisPan Du, Xiao Zhang, Chiang-Ching Huang, Nadereh Jafari, Warren A. Kibbe, Lifang Hou, Simon M. Lin. bmcbi, 11:587, 2010. [doi]

2009

2008

::::lumi::::: a pipeline for processing Illumina microarrayPan Du, Warren A. Kibbe, Simon M. Lin. bioinformatics, 24(13):1547-1548, 2008. [doi]

A divide-and-conquer strategy to solve the out-of-memory problem of processing thousands of Affymetrix microarraysChia-Ju Lee, Dong Fu, Pan Du, Hongmei Jiang, Simon M. Lin, Warren A. Kibbe. ijcbdd, 1(4):396-405, 2008. [doi]

2007

Xanthusbase: adapting wikipedia principles to a model organism databaseBradley I. Arshinoff, Garret Suen, Eric M. Just, Sohel M. Merchant, Warren A. Kibbe, Rex L. Chisholm, Roy D. Welch. nar, 35(Database-Issue):422-426, 2007. [doi]

Application of Wavelet Transform to the MS-based Proteomics Data PreprocessingPan Du, Simon M. Lin, Warren A. Kibbe, Haihui Wang. bibe 2007: 680-686 [doi]

OligoCalc: an online oligonucleotide properties calculatorWarren A. Kibbe. nar, 35(Web-Server-Issue):43-46, 2007. [doi]

2006

dictyBase, the model organism database for ::::Dictyostelium discoideum::::Rex L. Chisholm, Pascale Gaudet, Eric M. Just, Karen E. Pilcher, Petra Fey, Sohel N. Merchant, Warren A. Kibbe. nar, 34(Database-Issue):423-427, 2006. [doi]

Improved peak detection in mass spectrum by incorporating continuous wavelet transform-based pattern matchingPan Du, Warren A. Kibbe, Simon M. Lin. bioinformatics, 22(17):2059-2065, 2006. [doi]

2004

dictyBase: a new Dictyostelium discoideum genome databaseLisa Kreppel, Petra Fey, Pascale Gaudet, Eric M. Just, Warren A. Kibbe, Rex L. Chisholm, Alan R. Kimmel. nar, 32(Database-Issue):332-333, 2004.

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