Xiting Yan - researchr alias

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Viewing Publication 1 - 12 from 12

2024

2023

A novel Bayesian framework for harmonizing information across tissues and studies to increase cell type deconvolution accuracyWenxuan Deng, Bolun Li, Jiawei Wang, Wei Jiang 0019, Xiting Yan, Ningshan Li, Milica Vukmirovic, Naftali Kaminski, Jing Wang, Hongyu Zhao. bib, 24(1), January 2023. [doi]

iDESC: identifying differential expression in single-cell RNA sequencing data with multiple subjectsYunqing Liu, Jiayi Zhao, Taylor Sterling Adams, Ningya Wang, Jonas Schupp, Weimiao Wu, John E. McDonough, Geoffrey Lowell Chupp, Naftali Kaminski, Zuoheng Wang, Xiting Yan. bmcbi, 24(1):318, December 2023. [doi]

Correction: iDESC: identifying differential expression in single-cell RNA sequencing data with multiple subjectsYunqing Liu, Jiayi Zhao, Taylor Sterling Adams, Ningya Wang, Jonas Schupp, Weimiao Wu, John E. McDonough, Geoffrey Lowell Chupp, Naftali Kaminski, Zuoheng Wang, Xiting Yan. bmcbi, 24(1):394, December 2023. [doi]

2021

Openness weighted association studies: leveraging personal genome information to prioritize non-coding variantsShuang Song, Nayang Shan, Geng Wang, Xiting Yan, Jun S. Liu, Lin Hou. bioinformatics, 37(24):4737-4743, 2021. [doi]

G2S3: A gene graph-based imputation method for single-cell RNA sequencing dataWeimiao Wu, Yunqing Liu, Qile Dai, Xiting Yan, Zuoheng Wang. ploscb, 17(5), 2021. [doi]

2020

Latent-space embedding of expression data identifies gene signatures from sputum samples of asthmatic patientsShaoke Lou, Tianxiao Li, Daniel Spakowicz, Xiting Yan, Geoffrey Lowell Chupp, Mark Gerstein. bmcbi, 21(1):457, 2020. [doi]

2017

A novel pathway-based distance score enhances assessment of disease heterogeneity in gene expressionXiting Yan, Anqi Liang, Jose Gomez, Lauren Cohn, Hongyu Zhao, Geoffrey L. Chupp. bmcbi, 18(1):309, 2017. [doi]

2008

Testing gene set enrichment for subset of genes: Sub-GSEXiting Yan, Fengzhu Sun. bmcbi, 9, 2008. [doi]

2007

Inferring activity changes of transcription factors by binding association with sorted expression profilesChao Cheng, Xiting Yan, Fengzhu Sun, Lei M. Li. bmcbi, 8, 2007. [doi]

2006

MARD: a new method to detect differential gene expression in treatment-control time coursesChao Cheng, Xiaotu Ma, Xiting Yan, Fengzhu Sun, Lei M. Li. bioinformatics, 22(21):2650-2657, 2006. [doi]

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