Journal: Bioinformatics

Volume 14, Issue 10

830 -- 838Emmet A. O Brien, Desmond G. Higgins. Empirical estimation of the reliability of ribosomal RNA alignments
839 -- 845Torbjørn Rognes, Erling Seeberg. SALSA: improved protein database searching by a new algorithm for assembly of sequence fragments into gapped alignments
846 -- 856Kevin Karplus, Christian Barrett, Richard Hughey. Hidden Markov models for detecting remote protein homologies
857 -- 865C. T. Zhang, R. Zhang. A new criterion to classify globular proteins based on their secondary structure contents
866 -- 868W. J. Lin, M. J. Hwang. VHMPT: a graphical viewer and editor for helical membrane protein topologies
869 -- 883Pedro Mendes, Douglas B. Kell. Non-linear optimization of biochemical pathways: applications to metabolic engineering and parameter estimation
884 -- 885. GeneDn: for high-level expression design of heterologous genes in a prokaryotic system
888 -- 889M. Rimer, Michael O Connell. BioABACUS: a database of abbreviations and acronyms in biotechnology and computer science
890 -- 891K. C. Worley, P. Culpepper, B. A. Wiese, R. F. Smith. BEAUTY-X: enhanced BLAST searches for DNA queries
892 -- 893James A. Cuff, Michele E. Clamp, Asim S. Siddiqui, M. Finlay, Geoffrey J. Barton. JPred: a consensus secondary structure prediction server