Kevin Karplus - researchr alias

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Viewing Publication 1 - 33 from 33

2015

Analysis of nanopore data using hidden Markov modelsJacob Schreiber, Kevin Karplus. bioinformatics, 31(12):1897-1903, 2015. [doi]

2011

Protein Packing Quality Using Delaunay ComplexesRasmus Fonseca, Pawel Winter, Kevin Karplus. isvd 2011: 117-122 [doi]

Identification of prokaryotic small proteins using a comparative genomic approachJosue Samayoa, Fitnat H. Yildiz, Kevin Karplus. bioinformatics, 27(13):1765-1771, 2011. [doi]

2010

Improving protein secondary structure prediction using a simple ::::k::::-mer modelMartin Madera, Ryan Calmus, Grant Thiltgen, Kevin Karplus, Julian Gough. bioinformatics, 26(5):596-602, 2010. [doi]

2009

SAM-T08, HMM-based protein structure predictionKevin Karplus. nar, 37(Web-Server-Issue):492-497, 2009. [doi]

Pokefind: a novel topological filter for use with protein structure predictionFiras Khatib, Carol A. Rohl, Kevin Karplus. bioinformatics, 25(12), 2009. [doi]

2008

PREDICT-2ND: a tool for generalized protein local structure predictionSol Katzman, Christian Barrett, Grant Thiltgen, Rachel Karchin, Kevin Karplus. bioinformatics, 24(21):2453-2459, 2008. [doi]

2005

2004

SPrCY: comparison of structural predictions in the Saccharomyces cerevisiae genomeTodd J. Dolinsky, P. M. J. Burgers, Kevin Karplus, Nathan A. Baker. bioinformatics, 20(14):2312-2314, 2004. [doi]

2002

Predicting reliable regions in protein sequence alignmentsMelissa S. Cline, Richard Hughey, Kevin Karplus. bioinformatics, 18(2):306-314, 2002.

Classifying G-protein coupled receptors with support vector machinesRachel Karchin, Kevin Karplus, David Haussler. bioinformatics, 18(1):147-159, 2002.

2001

Evaluation of protein multiple alignments by SAM-T99 using the BAliBASE multiple alignment test setKevin Karplus, Birong Hu. bioinformatics, 17(8):713-720, 2001.

2000

A homolog of mammalian antizyme is present in fission yeast Schizosaccharomyces pombe but not detected in budding yeast Saccharomyces cerevisiaeChang Zhu, Kevin Karplus, Leslie Grate, Philip Coffino. bioinformatics, 16(5):478-481, 2000.

1998

Kestrel: A Programmable Array for Sequence AnalysisJeffrey D. Hirschberg, David M. Dahle, Kevin Karplus, Don Speck, Richard Hughey. vlsisp, 19(2):115-126, 1998. [doi]

Hidden Markov models for detecting remote protein homologiesKevin Karplus, Christian Barrett, Richard Hughey. bioinformatics, 14(10):846-856, 1998.

1997

Scoring hidden Markov modelsChristian Barrett, Richard Hughey, Kevin Karplus. bioinformatics, 13(2):191-199, 1997.

Kestrel: Design of an 8-bit SIMD Parallel ProcessorDavid M. Dahle, Jeffrey D. Hirschberg, Kevin Karplus, Hansjörg Keller, Eric Rice, Don Speck, Douglas H. Williams, Richard Hughey. arvlsi 1997: 145 [doi]

1996

1995

Evaluating Regularizers for Estimating Distributions of Amino AcidsKevin Karplus. ismb 1995: 188-196

1991

A semi-systolic decoder for the PDSC-73 error-correcting codeKevin Karplus, Habib Krit. DAM, 33(1-3):109-128, 1991. [doi]

Xmap: A Technology Mapper for Table-Lookup Field-Programmable Gate ArraysKevin Karplus. dac 1991: 240-243 [doi]

Amap: A Technology Mapper for Selector-Based Field-Programmable Gate ArraysKevin Karplus. dac 1991: 244-247 [doi]

Logic Minimization using Two-column Rectangle ReplacementSøren Søe, Kevin Karplus. dac 1991: 470-473 [doi]

1990

Computing signal delay in general RC networks by tree/link partitioningPak K. Chan, Kevin Karplus. tcad, 9(8):898-902, 1990. [doi]

1989

Computing Signal Delay in General RC Networks by Tree/Link PartitioningPak K. Chan, Kevin Karplus. dac 1989: 485-490 [doi]

1986

Finding minimal perfect hash functionsGary Haggard, Kevin Karplus. sigcse 1986: 191-193 [doi]

Getting High Performance with Slow MemoryKevin Karplus, Alexandru Nicolau. compcon 1986: 248-253

1985

Efficient hardware for multiway jumps and pre-fetchesKevin Karplus, Alexandru Nicolau. micro 1985: 11-18 [doi]

1983

CHISEL: an extension to the programming language C for VLSI layoutKevin Karplus. PhD thesis, Stanford University, USA, 1983. [doi]

1981

Optimal Wiring between RectanglesDanny Dolev, Kevin Karplus, Alan Siegel, Alex Strong, Jeffrey D. Ullman. stoc 1981: 312-317

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