| 1457 | -- | 1460 | Christian Weinel, Maria D. Ermolaeva, Christos A. Ouzounis. PseuRECA: genome annotation and gene context analysis for Pseudomonas aeruginosa PAO1 |
| 1461 | -- | 1468 | T. Z. DeSantis Jr., I. Dubosarskiy, S. R. Murray, Gary L. Andersen. Comprehensive aligned sequence construction for automated design of effective probes (CASCADE-P) using 16S rDNA |
| 1469 | -- | 1476 | Dilip Rajagopalan. A comparison of statistical methods for analysis of high density oligonucleotide array data |
| 1477 | -- | 1483 | Keith A. Baggerly, Li Deng, Jeffrey S. Morris, C. Marcelo Aldaz. Differential expression in SAGE: accounting for normal between-library variation |
| 1484 | -- | 1491 | Ray L. Somorjai, B. Dolenko, Richard Baumgartner. Class prediction and discovery using gene microarray and proteomics mass spectroscopy data: curses, caveats, cautions |
| 1492 | -- | 1496 | Ian Korf. Serial BLAST searching |
| 1497 | -- | 1504 | Louxin Zhang, Bin Ma, Lusheng Wang, Ying Xu 0002. Greedy method for inferring tandem duplication history |
| 1505 | -- | 1513 | Ari Löytynoja, Michel C. Milinkovitch. A hidden Markov model for progressive multiple alignment |
| 1514 | -- | 1523 | Yoshiharu Hayashi, Katsuyoshi Sakaguchi, Mime Kobayashi, Masaki Kobayashi, Yo Kikuchi, Eiichiro Ichiishi. Molecular evaluation using in silico protein interaction profiles |
| 1524 | -- | 1530 | Jie Wu, Simon Kasif, Charles DeLisi. Identification of functional links between genes using phylogenetic profiles |
| 1531 | -- | 1539 | David Mittelman, Ruslan Sadreyev, Nick V. Grishin. Probabilistic scoring measures for profile-profile comparison yield more accurate short seed alignments |
| 1540 | -- | 1548 | Bala Krishnamoorthy, Alexander Tropsha. Development of a four-body statistical pseudo-potential to discriminate native from non-native protein conformations |
| 1549 | -- | 1555 | Homayoun Valafar, James H. Prestegard. Rapid classification of a protein fold family using a statistical analysis of dipolar couplings |
| 1556 | -- | 1563 | Simon Whelan, Paul I. W. de Bakker, Nick Goldman. Pandit: a database of protein and associated nucleotide domains with inferred trees |
| 1564 | -- | 1571 | Patrick Lambrix, Manal Habbouche, Marta Pérez. Evaluation of ontology development tools for bioinformatics |
| 1572 | -- | 1574 | Fredrik Ronquist, John P. Huelsenbeck. MrBayes 3: Bayesian phylogenetic inference under mixed models |
| 1575 | -- | 1577 | Leila Taher, Oliver Rinner, Saurabh Garg, Alexander Sczyrba, Michael Brudno, Serafim Batzoglou, Burkhard Morgenstern. AGenDA: homology-based gene prediction |
| 1578 | -- | 1579 | Yang Su, T. M. Murali, Vladimir Pavlovic, Michael Schaffer, Simon Kasif. RankGene: identification of diagnostic genes based on expression data |
| 1580 | -- | 1582 | Sacha A. F. T. van Hijum, Anne de Jong, Girbe Buist, Jan Kok, Oscar P. Kuipers. UniFrag and GenomePrimer: selection of primers for genome-wide production of unique amplicons |
| 1583 | -- | 1584 | Naoki Sato, Shigeki Ehira. GenoMap, a circular genome data viewer |
| 1585 | -- | 1586 | Kuo-Bin Li. ClustalW-MPI: ClustalW analysis using distributed and parallel computing |
| 1587 | -- | 1588 | Apuã C. M. Paquola, Milton Y. Nishyiama Jr., Eduardo M. Reis, Aline Maria da Silva, Sergio Verjovski-Almeida. ESTWeb: bioinformatics services for EST sequencing projects |
| 1589 | -- | 1591 | Guoli Wang, Roland L. Dunbrack Jr.. PISCES: a protein sequence culling server |
| 1592 | -- | 1593 | Michael Sammeth, Jörg Rothgänger, W. Esser, Jürgen Albert, Jens Stoye, Dag Harmsen. Digital extractor: analysis of digital differential display output |
| 1594 | -- | 1595 | Stephen F. Madden, Barry O Donovan, Simon J. Furney, Hugh R. Brady, Guenole C. M. Silvestre, Peter P. Doran. Digital extractor: analysis of digital differential display output |