Journal: Bioinformatics

Volume 24, Issue 8

1035 -- 1040Gennady Denisov, Brian Walenz, Aaron L. Halpern, Jason Miller, Nelson Axelrod, Samuel Levy, Granger G. Sutton. Consensus generation and variant detection by Celera Assembler
1041 -- 1048Jan Mrázek, Shaohua Xie, Xiangxue Guo, Anuj Srivastava. AIMIE: a web-based environment for detection and interpretation of significant sequence motifs in prokaryotic genomes
1049 -- 1055Yossef Kliger, Eyal Gofer, Assaf Wool, Amir Toporik, Avihay Apatoff, Moshe Olshansky. Predicting proteolytic sites in extracellular proteins: only halfway there
1056 -- 1062Jin Xu, Xinping Cui. Robustified MANOVA with applications in detecting differentially expressed genes from oligonucleotide arrays
1063 -- 1069Matthias E. Futschik, Hanspeter Herzel. Are we overestimating the number of cell-cycling genes? The impact of background models on time-series analysis
1070 -- 1077Peicheng Du, Gustavo Stolovitzky, Peter Horvatovich, Rainer Bischoff 0003, Jihyeon Lim, Frank Suits. A noise model for mass spectrometry based proteomics
1078 -- 1084Guido Sanguinetti, Josselin Noirel, Phillip C. Wright. MMG: a probabilistic tool to identify submodules of metabolic pathways
1085 -- 1092Pang-Kai Liu, Feng-Sheng Wang. Inference of biochemical network models in S-system using multiobjective optimization approach
1093 -- 1099Desmond J. Higham, Marija Rasajski, Natasa Przulj. Fitting a geometric graph to a protein-protein interaction network
1100 -- 1101Tony Chiang, Nianhua Li, Sandra E. Orchard, Samuel Kerrien, Henning Hermjakob, Robert Gentleman, Wolfgang Huber. Rintact: enabling computational analysis of molecular interaction data from the IntAct repository
1102 -- 1103James A. Morris, Simon A. Gayther, Ian J. Jacobs, Christopher Jones. A suite of Perl modules for handling microarray data
1104 -- 1105Wolfgang Rieping, Michael Nilges, Michael Habeck. ISD: a software package for Bayesian NMR structure calculation
1109 -- 1111Gang Liu, Sriram Neelamegham. ::::In silico:::: Biochemical Reaction Network Analysis (IBRENA): a package for simulation and analysis of reaction networks
1112 -- 1114David P. Nickerson, Alberto Corrias, Martin L. Buist. Reference descriptions of cellular electrophysiology models
1115 -- 1117Arek Gladki, Pawel Siedlecki, Szymon Kaczanowski, Piotr Zielenkiewicz. e-LiSe - an online tool for finding needles in the (Medline) haystack
1118 -- 1120Anders Lanzén, Tom Oinn. The Taverna Interaction Service: enabling manual interaction in workflows