| 899 | -- | 902 | Kenneth B. Schou, Jens S. Andersen, Lotte B. Pedersen. A divergent calponin homology (NN-CH) domain defines a novel family: implications for evolution of ciliary IFT complex B proteins |
| 903 | -- | 907 | Lucian P. Smith, Erik Butterworth, James B. Bassingthwaighte, Herbert M. Sauro. SBML and CellML translation in Antimony and JSim |
| 908 | -- | 914 | Nha Nguyen, An Vo, Kyoung-Jae Won. A wavelet-based method to exploit epigenomic language in the regulatory region |
| 915 | -- | 922 | Yu Qian, Brian L. Browning, Sharon R. Browning. Efficient clustering of identity-by-descent between multiple individuals |
| 923 | -- | 930 | Yang Liao, Gordon K. Smyth, Wei Shi. featureCounts: an efficient general purpose program for assigning sequence reads to genomic features |
| 931 | -- | 940 | Dan Ofer, Michal Linial. NeuroPID: a predictor for identifying neuropeptide precursors from metazoan proteomes |
| 941 | -- | 948 | Ronak Y. Patel, Gary D. Stormo. Discriminative motif optimization based on perceptron training |
| 949 | -- | 955 | Xuefeng Cui, Shuai Cheng Li, Lin He, Ming Li. Fingerprinting protein structures effectively and efficiently |
| 956 | -- | 961 | Amit G. Deshwar, Quaid Morris. PLIDA: cross-platform gene expression normalization using perturbed topic models |
| 962 | -- | 970 | Krzysztof Polanski, Johanna Rhodes, Claire Hill, Peijun Zhang, Dafyd J. Jenkins, Steven J. Kiddle, Aleksey Jironkin, Jim Beynon, Vicky Buchanan-Wollaston, Sascha Ott, Katherine J. Denby. Wigwams: identifying gene modules co-regulated across multiple biological conditions |
| 971 | -- | 974 | Hadi Jorjani, Mihaela Zavolan. TSSer: an automated method to identify transcription start sites in prokaryotic genomes from differential RNA sequencing data |
| 975 | -- | 980 | Jon Pey, Francisco J. Planes, John E. Beasley. Refining carbon flux paths using atomic trace data |
| 981 | -- | 987 | Satoshi Ohno, Hiroshi Shimizu, Chikara Furusawa. FastPros: screening of reaction knockout strategies for metabolic engineering |
| 988 | -- | 995 | Nils Hoffmann, Mathias Wilhelm, Anja Doebbe, Karsten Niehaus, Jens Stoye. BiPACE 2D - graph-based multiple alignment for comprehensive 2D gas chromatography-mass spectrometry |
| 996 | -- | 1002 | Lin Yang, Xin Qi, Fuyong Xing, Tahsin M. Kurç, Joel H. Saltz, David J. Foran. Parallel content-based sub-image retrieval using hierarchical searching |
| 1003 | -- | 1005 | Brian J. Raney, Timothy R. Dreszer, Galt P. Barber, Hiram Clawson, Pauline A. Fujita, Ting Wang, Ngan Nguyen, Benedict Paten, Ann S. Zweig, Donna Karolchik, W. James Kent. Track data hubs enable visualization of user-defined genome-wide annotations on the UCSC Genome Browser |
| 1006 | -- | 1007 | Hao Zhao, Zhifu Sun, Jing Wang, Haojie Huang, Jean-Pierre Kocher, Liguo Wang. CrossMap: a versatile tool for coordinate conversion between genome assemblies |
| 1008 | -- | 1009 | Daniel R. Zerbino, Nathan Johnson, Thomas Juettemann, Steven P. Wilder, Paul Flicek. WiggleTools: parallel processing of large collections of genome-wide datasets for visualization and statistical analysis |
| 1010 | -- | 1012 | Jaebum Kim, Jian Ma. PSAR-Align: improving multiple sequence alignment using probabilistic sampling |
| 1013 | -- | 1014 | Hue Vuong, Robert M. Stephens, Natalia Volfovsky. AVIA: an interactive web-server for annotation, visualization and impact analysis of genomic variations |
| 1015 | -- | 1016 | Beifang Niu, Kai Ye, Qunyuan Zhang, Charles Lu, Mingchao Xie, Michael D. McLellan, Michael C. Wendl, Li Ding. MSIsensor: microsatellite instability detection using paired tumor-normal sequence data |
| 1017 | -- | 1019 | Sebastián Duchêne, Martyna Molak, Simon Y. W. Ho. ClockstaR: choosing the number of relaxed-clock models in molecular phylogenetic analysis |
| 1020 | -- | 1021 | Nicolas Rodrigue, Nicolas Lartillot. Site-heterogeneous mutation-selection models within the PhyloBayes-MPI package |
| 1022 | -- | 1024 | Silvia Caprari, Daniele Toti, Le Viet Hung, Maurizio Di Stefano, Fabio Polticelli. ASSIST: a fast versatile local structural comparison tool |
| 1025 | -- | 1026 | Eric Wu, Tracy Nance, Stephen B. Montgomery. SplicePlot: a utility for visualizing splicing quantitative trait loci |
| 1027 | -- | 1028 | Ida Moltke, Anders Albrechtsen. RelateAdmix: a software tool for estimating relatedness between admixed individuals |
| 1029 | -- | 1030 | Charles Winterhalter, Pawel Widera, Natalio Krasnogor. JEPETTO: a Cytoscape plugin for gene set enrichment and topological analysis based on interaction networks |
| 1031 | -- | 1033 | Xiaoquan Su, Xuetao Wang, Gongchao Jing, Kang Ning. GPU-Meta-Storms: computing the structure similarities among massive amount of microbial community samples using GPU |
| 1034 | -- | 1035 | Jan Taubert, Keywan Hassani-Pak, Nathalie Castells-Brooke, Christopher J. Rawlings. Ondex Web: web-based visualization and exploration of heterogeneous biological networks |
| 1036 | -- | 1038 | John T. Sauls, Joerg M. Buescher. Assimilating genome-scale metabolic reconstructions with modelBorgifier |
| 1039 | -- | 1040 | Anabel Usie, Rui Alves, Francesc Solsona, Miguel Vazquez, Alfonso Valencia. CheNER: chemical named entity recognizer |
| 1041 | -- | 1042 | Rodrigo Aldecoa, Ignacio Marín. SurpriseMe: an integrated tool for network community structure characterization using Surprise maximization |
| 1043 | -- | 1044 | Mengyuan Fan, Hong Sang Low, Hufeng Zhou, Markus Wenk, Limsoon Wong. LipidGO: database for lipid-related GO terms and applications |
| 1045 | -- | 1046 | Changqing Zhang, Guangping Li, Shinong Zhu, Shuo Zhang, Jinggui Fang. tasiRNAdb: a database of ta-siRNA regulatory pathways |
| 1047 | -- | 1048 | Nestoras Karathanasis, Ioannis Tsamardinos, Panayiota Poirazi. Don't use a cannon to kill the ... miRNA mosquito |