Peter Murray-Rust - researchr profile publications

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Publications with a 'Peter Murray-Rust' as author, editor, or advisor:

Chemical Markup, XML, and the World Wide Web. 4. CML SchemaPeter Murray-Rust, Henry S. Rzepa. jcisd, 43(3):757-772, 2003. [doi]
Chemical Markup, XML and the World-Wide Web. 8. Polymer Markup LanguageNico Adams, Jerry Winter, Peter Murray-Rust, Henry S. Rzepa. jcisd, 48(11):2118-2128, 2008. [doi]
JUMBO: An Object-Based XML BrowserPeter Murray-Rust. wwwj, 2(4):197-206, 1997.
SPECTRa: The Deposition and Validation of Primary Chemistry Research Data in Digital RepositoriesJim Downing, Peter Murray-Rust, Alan P. Tonge, Peter B. Morgan, Henry S. Rzepa, Fiona Cotterill, Nick Day, Matt J. Harvey. jcisd, 48(8):1571-1581, 2008. [doi]
Semantic physical sciencePeter Murray-Rust, Henry S. Rzepa. jcheminf, 4:14, 2012. [doi]
The ContentMine Scraping Stack: Literature-scale Content Mining with Community-maintained Collections of Declarative ScrapersRichard Smith-Unna, Peter Murray-Rust. dlib, 20(11/12), 2014. [doi]
Chemical Markup, XML and the World-Wide Web. 2. Information Objects and the CMLDOMPeter Murray-Rust, Henry S. Rzepa. jcisd, 41(5):1113-1123, 2001. [doi]
Chemical Markup, XML, and the World Wide Web. 6. CMLReact, an XML Vocabulary for Chemical ReactionsGemma L. Holliday, Peter Murray-Rust, Henry S. Rzepa. jcisd, 46(1):145-157, 2006. [doi]
Language Resources and Chemical InformaticsC. J. Rupp, Ann A. Copestake, Peter Corbett, Peter Murray-Rust, Advaith Siddharthan, Simone Teufel, Benjamin Waldron. lrec 2008: [doi]
AMI-diagram: Mining Facts from ImagesPeter Murray-Rust, Richard Smith-Unna, Ross Mounce. dlib, 20(11/12), 2014. [doi]
Chemical Markup Language: A Simple Introduction to Structured DocumentsPeter Murray-Rust. wwwj, 2(4):135-147, 1997.
How do we make Scholarship Semantic?Peter Murray-Rust. esws 2013: 6-9 [doi]
Changing computational research. The challenges aheadCameron Neylon, Jan Aerts, C. Brown, Simon J. Coles, Les Hatton, Daniel Lemire, K. Millman, Peter Murray-Rust, Fernando Perez, Neil F. W. Saunders, Nigam Shah, Arfon Smith, Gaël Varoquaux, Egon L. Willighagen. scfbm, 7:2, 2012. [doi]
High-Throughput Identification of Chemistry in Life Science TextsPeter Corbett, Peter Murray-Rust. complife 2006: 107-118 [doi]
The Application of Chemical Multipurpose Internet Mail Extensions (Chemical MIME) Internet Standards to Electronic Mail and World Wide Web Information ExchangeHenry S. Rzepa, Peter Murray-Rust, Benjamin J. Whitaker. jcisd, 38(6):976-982, 1998. [doi]
Chemical Markup, XML, and the World Wide Web. 5. Applications of Chemical Metadata in RSS AggregatorsPeter Murray-Rust, Henry S. Rzepa, Mark J. Williamson, Egon L. Willighagen. jcisd, 44(2):462-469, 2004. [doi]
XML for scientific publishingPeter Murray-Rust, Henry S. Rzepa. oclc, 19(4):162-169, 2003. [doi]
The Next Big Thing: From Hypermedia to DatumentsPeter Murray-Rust, Henry S. Rzepa. jodi, 5(1), 2004. [doi]
Chemical Name to Structure: OPSIN, an Open Source SolutionDaniel M. Lowe, Peter T. Corbett, Peter Murray-Rust, Robert C. Glen. jcisd, 51(3):739-753, 2011. [doi]
CMLLite: a design philosophy for CMLJoe Townsend, Peter Murray-Rust. jcheminf, 3:39, 2011. [doi]
'pygetpapers': a Python library for automated retrieval of scientific literatureAyush Garg 0008, Richard Smith-Unna, Peter Murray-Rust. jossw, 7(75):4451, 2022. [doi]
Standards-based curation of a decade-old digital repository dataset of molecular informationMatthew J. Harvey, Nicholas J. Mason, Andrew McLean, Peter Murray-Rust, Henry S. Rzepa, James J. P. Stewart. jcheminf, 7, 2015. [doi]
OSCAR4: a flexible architecture for chemical text-miningDavid M. Jessop, Sam E. Adams, Egon L. Willighagen, Lezan Hawizy, Peter Murray-Rust. jcheminf, 3:41, 2011. [doi]
Chemical Markup, XML, and the Worldwide Web. 1. Basic PrinciplesPeter Murray-Rust, Henry S. Rzepa. jcisd, 39(6):928-942, 1999. [doi]
An e-Science data infrastructure for simulations within Grid computing environment: methods, approaches and practiceXiaoyu Yang, Martin T. Dove, Richard P. Bruin, Andrew D. Walkingshaw, Richard Sinclair, Dan J. Wilson, Peter Murray-Rust. concurrency, 25(3):385-409, 2013. [doi]
Bioclipse: an open source workbench for chemo- and bioinformaticsOla Spjuth, Tobias Helmus, Egon L. Willighagen, Stefan Kuhn, Martin Eklund, Johannes Wagener, Peter Murray-Rust, Christoph Steinbeck, Jarl E. S. Wikberg. bmcbi, 8, 2007. [doi]
Scientific publications in XML - towards a global knowledge basePeter Murray-Rust, Henry S. Rzepa. datascience, 1(1):84-98, 2002.
Mining chemical information from open patentsDavid M. Jessop, Sam E. Adams, Peter Murray-Rust. jcheminf, 3:40, 2011. [doi]
Information Delivery in Computational Mineral Science: The eMinerals Data Handling SystemToby O. H. White, Martin T. Dove, Richard P. Bruin, Kat F. Austen, Andrew M. Walker, Emilio Artacho, Arnaud Marmier, Steve C. Parker, Peter Murray-Rust, Andrew D. Walkingshaw, Philip A. Couch, Rik P. Tyer, Ilian T. Todorov, Dan J. Wilson. eScience 2006: 59 [doi]
Will Europe Liberate Knowledge through Content Mining?Peter Murray-Rust. ercim, (107), October 2016. [doi]
The Social, Political and Legal Aspects of Text and Data Mining (TDM)Michelle Brook, Peter Murray-Rust, Charles Oppenheim. dlib, 20(11/12), 2014. [doi]
The semantics of Chemical Markup Language (CML) for computational chemistry: CompChemWeerapong Phadungsukanan, Markus Kraft, Joe Townsend, Peter Murray-Rust. jcheminf, 4:15, 2012. [doi]
MACiE: a database of enzyme reaction mechanismsGemma L. Holliday, Gail J. Bartlett, Daniel E. Almonacid, Noel M. O Boyle, Peter Murray-Rust, Janet M. Thornton, John B. O. Mitchell. bioinformatics, 21(23):4315-4316, 2005. [doi]
CML: Evolution and designPeter Murray-Rust, Henry S. Rzepa. jcheminf, 3:44, 2011. [doi]
MACiE (Mechanism, Annotation and Classification in Enzymes): novel tools for searching catalytic mechanismsGemma L. Holliday, Daniel E. Almonacid, Gail J. Bartlett, Noel M. O Boyle, James W. Torrance, Peter Murray-Rust, John B. O. Mitchell, Janet M. Thornton. nar, 35(Database-Issue):515-520, 2007. [doi]
The semantics of Chemical Markup Language (CML): dictionaries and conventionsPeter Murray-Rust, Joe Townsend, Sam E. Adams, Weerapong Phadungsukanan, Jens Thomas. jcheminf, 3:43, 2011. [doi]
Towards Lensfield - Data Management, Processing and Semantic Publication for Vernacular e-ScienceNick Day, Jim Downing, Lezan Hawizy, Nico Adams, Peter Murray-Rust. eScience 2009: 352-357 [doi]
A new publishing paradigm: STM articles as part of the semantic webHenry S. Rzepa, Peter Murray-Rust. lp, 14(3):177-182, 2001. [doi]
Ami - The chemist's amanuensisBrian Brooks, Adam L. Thorn, Matthew Smith, Peter Matthews, Shaoming Chen, Ben O'Steen, Sam E. Adams, Joe Townsend, Peter Murray-Rust. jcheminf, 3:45, 2011. [doi]
Open Data, Open Source and Open Standards in chemistry: The Blue Obelisk five years onNoel M. O'Boyle, Rajarshi Guha, Egon L. Willighagen, Sam E. Adams, Jonathan Alvarsson, Jean-Claude Bradley, Igor V. Filippov, Robert M. Hanson, Marcus D. Hanwell, Geoffrey R. Hutchison, Craig A. James, Nina Jeliazkova, Andrew S. I. D. Lang, Karol M. Langner, David C. Lonie, Daniel M. Lowe, Jérôme Pansanel, Dmitry Pavlov, Ola Spjuth, Christoph Steinbeck, Adam L. Tenderholt, Kevin J. Theisen, Peter Murray-Rust. jcheminf, 3:37, 2011. [doi]
SPECTRa-T: Machine-Based Data Extraction and Semantic Searching of Chemistry e-ThesesJim Downing, Matt J. Harvey, Peter B. Morgan, Peter Murray-Rust, Henry S. Rzepa, Diana C. Stewart, Alan P. Tonge, Joe Townsend. jcisd, 50(2):251-261, 2010. [doi]
Mathematics and Scientific MarkupPeter Murray-Rust. AISC 2007: 128-129 [doi]
Semantic science and its communication - a personal viewPeter Murray-Rust. jcheminf, 3:48, 2011. [doi]
The semantic architecture of the World-Wide Molecular Matrix (WWMM)Peter Murray-Rust, Sam E. Adams, Jim Downing, Joe Townsend, Yong Zhang. jcheminf, 3:42, 2011. [doi]
Chemistry in BioinformaticsPeter Murray-Rust, John B. O. Mitchell, Henry S. Rzepa. bmcbi, 6:141, 2005. [doi]
Chempound - a Web 2.0-inspired repository for physical science dataSam E. Adams, Peter Murray-Rust. jodi, 13(1), 2012. [doi]
Chemical Markup, XML, and the World Wide Web, 7. CMLSpect, an XML Vocabulary for Spectral DataStefan Kuhn, Tobias Helmus, Robert J. Lancashire, Peter Murray-Rust, Henry S. Rzepa, Christoph Steinbeck, Egon L. Willighagen. jcisd, 47(6):2015-2034, 2007. [doi]
CHIC - Converting Hamburgers into CowsJoseph A. Townsend, Jim Downing, Peter Murray-Rust. eScience 2009: 337-343 [doi]
Communication and re-use of chemical information in biosciencePeter Murray-Rust, John B. O. Mitchell, Henry S. Rzepa. bmcbi, 6:180, 2005. [doi]
ChemicalTagger: A tool for semantic text-mining in chemistryLezan Hawizy, David M. Jessop, Nico Adams, Peter Murray-Rust. jcheminf, 3:17, 2011. [doi]
The Quixote project: Collaborative and Open Quantum Chemistry data management in the Internet ageSam E. Adams, Pablo de Castro, Pablo Echenique, Jorge Estrada, Marcus D. Hanwell, Peter Murray-Rust, Paul Sherwood, Jens Thomas, Joe Townsend. jcheminf, 3:38, 2011. [doi]
Open Bibliography for Science, Technology, and MedicineRichard Jones, Mark MacGillivray, Peter Murray-Rust, Jim Pitman, Peter Sefton, Ben O'Steen, William Waites. jcheminf, 3:47, 2011. [doi]
Chemical Markup, XML, and the World-Wide Web. 3. Toward a Signed Semantic Chemical Web of TrustGeorgios V. Gkoutos, Peter Murray-Rust, Henry S. Rzepa, Michael Wright. jcisd, 41(5):1124-1130, 2001. [doi]
STMML. A markup language for scientific, technical and medical publishingPeter Murray-Rust, Henry S. Rzepa. datascience, 1(2):1-65, 2002.
The Blue Obelisk-Interoperability in Chemical InformaticsRajarshi Guha, Michael T. Howard, Geoffrey R. Hutchison, Peter Murray-Rust, Henry S. Rzepa, Christoph Steinbeck, Jörg K. Wegner, Egon L. Willighagen. jcisd, 46(3):991-998, 2006. [doi]

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