2011
2010
- Parameterized specification, configuration and execution of data-intensive scientific workflowsVijay S. Kumar, Tahsin M. Kurç, Varun Ratnakar, Jihie Kim, Gaurang Mehta, Karan Vahi, Yoon-Ju Lee Nelson, P. Sadayappan, Ewa Deelman, Yolanda Gil, Mary W. Hall, Joel H. Saltz. cluster, 13(3):315-333, 2010. [doi]
2009
- An integrated framework for performance-based optimization of scientific workflowsVijay S. Kumar, P. Sadayappan, Gaurang Mehta, Karan Vahi, Ewa Deelman, Varun Ratnakar, Jihie Kim, Yolanda Gil, Mary W. Hall, Tahsin M. Kurç, Joel H. Saltz. hpdc 2009: 177-186 [doi]
2008
- Large-Scale Biomedical Image Analysis in Grid EnvironmentsVijay S. Kumar, Benjamin Rutt, Tahsin M. Kurç, Ümit V. Çatalyürek, T. C. Pan, Sunny Chow, Stephan Lamont, Maryann E. Martone, Joel H. Saltz. titb, 12(2):154-161, 2008. [doi]
- Model Formulation: Sharing Data and Analytical Resources Securely in a Biomedical Research Grid EnvironmentStephen Langella, Shannon Hastings, Scott Oster, Tony Pan, Ashish Sharma, Justin Permar, David Ervin, Berkant Barla Cambazoglu, Tahsin M. Kurç, Joel H. Saltz. jamia, 15(3):363-373, 2008. [doi]
- An imaging workflow for characterizing phenotypical change in large histological mouse model datasetsKishore Mosaliganti, Tony Pan, Randall Ridgway, Richard Sharp, Lee Cooper, Alex Gulacy, Ashish Sharma, M. Okan Irfanoglu, Raghu Machiraju, Tahsin M. Kurç, Alain de Bruin, Pamela Wenzel, Gustavo Leone, Joel H. Saltz, Kun Huang. jbi, 41(6):863-873, 2008. [doi]
- Model Formulation: caGrid 1.0: An Enterprise Grid Infrastructure for Biomedical ResearchScott Oster, Stephen Langella, Shannon Hastings, David Ervin, Ravi K. Madduri, Joshua Phillips, Tahsin M. Kurç, Frank Siebenlist, Peter A. Covitz, Krishnakant Shanbhag, Ian T. Foster, Joel H. Saltz. jamia, 15(2):138-149, 2008. [doi]
- e-Science, caGrid, and Translational Biomedical ResearchJoel H. Saltz, Tahsin M. Kurç, Shannon Hastings, Stephen Langella, Scott Oster, David Ervin, Ashish Sharma, Tony Pan, Metin N. Gurcan, Justin Permar, Renato Ferreira, Philip R. O. Payne, Ümit V. Çatalyürek, Enrico Caserta, Gustavo Leone, Michael C. Ostrowski, Ravi K. Madduri, Ian T. Foster, Subhasree Madhavan, Kenneth H. Buetow, Krishnakant Shanbhag, Eliot L. Siegel. Computer, 41(11):58-66, 2008. [doi]
- Translational research design templates, Grid computing, and HPCJoel H. Saltz, Scott Oster, Shannon Hastings, Stephen Langella, Renato Ferreira, Justin Permar, Ashish Sharma, David Ervin, Tony Pan, Ümit V. Çatalyürek, Tahsin M. Kurç. ipps 2008: 1-15 [doi]
2007
- Intelligent Optimization of Parallel and Distributed ApplicationsBhupesh Bansal, Ümit V. Çatalyürek, Jacqueline Chame, Chun Chen, Ewa Deelman, Yolanda Gil, Mary W. Hall, Vijay S. Kumar, Tahsin M. Kurç, Kristina Lerman, Aiichiro Nakano, Yoon-Ju Lee Nelson, Joel H. Saltz, Ashish Sharma, Priya Vashishta. ipps 2007: 1-6 [doi]
- GridIMAGE: A Novel Use of Grid Computing to Support Interactive Human and Computer-Assisted Detection Decision SupportMetin N. Gurcan, Tony Pan, Ashish Sharma, Tahsin M. Kurç, Scott Oster, Stephen Langella, Shannon Hastings, Khan M. Siddiqui, Eliot L. Siegel, Joel H. Saltz. jdi, 20(2):160-171, 2007. [doi]
- An Efficient and Reliable Scientific Workflow SystemTulio Tavares, George Teodoro, Tahsin M. Kurç, Renato Ferreira, Dorgival Olavo Guedes Neto, Wagner Meira Jr., Ümit V. Çatalyürek, Shannon Hastings, Scott Oster, Stephen Langella, Joel H. Saltz. ccgrid 2007: 445-452 [doi]
2006
- Models, methods and middleware for grid-enabled multiphysics oil reservoir managementHector Klie, Wolfgang Bangerth, X. Gai, Mary F. Wheeler, Paul L. Stoffa, Mrinal K. Sen, Manish Parashar, Ümit V. Çatalyürek, Joel H. Saltz, Tahsin M. Kurç. ewc, 22(3-4):349-370, 2006. [doi]
- Application of Information Technology: An XML-based System for Synthesis of Data from Disparate DatabasesTahsin M. Kurç, Daniel Janies, Andrew D. Johnson, Stephen Langella, Scott Oster, Shannon Hastings, Farhat Habib, Terry Camerlengo, David Ervin, Ümit V. Çatalyürek, Joel H. Saltz. jamia, 13(3):289-301, 2006. [doi]
- caGrid: design and implementation of the core architecture of the cancer biomedical informatics gridJoel H. Saltz, Scott Oster, Shannon Hastings, Stephen Langella, Tahsin M. Kurç, William Sanchez, Manav Kher, Arumani Manisundaram, Krishnakant Shanbhag, Peter A. Covitz. bioinformatics, 22(15):1910-1916, 2006. [doi]
2005
- XML database support for distributed execution of data-intensive scientific workflowsShannon Hastings, Matheus Ribeiro, Stephen Langella, Scott Oster, Ümit V. Çatalyürek, Tony Pan, Kun Huang, Renato Ferreira, Joel H. Saltz, Tahsin M. Kurç. SIGMOD, 34(3):50-55, 2005. [doi]
- A simulation and data analysis system for large-scale, data-driven oil reservoir simulation studiesTahsin M. Kurç, Ümit V. Çatalyürek, Xi Zhang, Joel H. Saltz, Ryan Martino, Mary F. Wheeler, Malgorzata Peszynska, Alan Sussman, Christian Hansen, Mrinal K. Sen, Roustam Seifoullaev, Paul L. Stoffa, Carlos Torres-Verdin, Manish Parashar. concurrency, 17(11):1441-1467, 2005. [doi]
- Supporting Large Scale Medical and Scientific DatasetsÜmit V. Çatalyürek, Shannon Hastings, Kun Huang, Vijay S. Kumar, Tahsin M. Kurç, Stephen Langella, Sivaramakrishnan Narayanan, Scott Oster, Tony Pan, Benjamin Rutt, Xi Zhang, Joel H. Saltz. parco 2005: 3-14
2004
- Tools for efficient subsetting and pipelined processing of large scale, distributed biomedical image dataMatheus Ribeiro, Tahsin M. Kurç, Tony Pan, Kun Huang, Ümit V. Çatalyürek, Xi Zhang, Stephen Langella, Shannon Hastings, Scott Oster, Renato Ferreira, Joel H. Saltz. hpc 2005: 403-422 [doi]
2003
- Driving Scientific Applications by Data in Distributed EnvironmentsJoel H. Saltz, Ümit V. Çatalyürek, Tahsin M. Kurç, Mike Gray, Shannon Hastings, Stephen Langella, Sivaramakrishnan Narayanan, Ryan Martino, Steven Bryant, Malgorzata Peszynska, Mary F. Wheeler, Alan Sussman, Michael D. Beynon, Christian Hansen, Don Stredney, Dennis Sessanna. iccS 2003: 355-364 [doi]
2002
2001
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