Ales Krenek - researchr alias

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Viewing Publication 1 - 23 from 23

2023

2022

Property Map Collective Variable as a Useful Tool for a Force Field CorrectionDalibor Trapl, Martin Krupicka, Vladimír Visnovský, Jana Hozzová, Jaroslav Olha, Ales Krenek, Vojtech Spiwok. jcisd, 62(3):567-576, 2022. [doi]

2021

Similarity Search for an Extreme Application: Experience and ImplementationVladimir Mic, Tomás Racek, Ales Krenek, Pavel Zezula. sisap 2021: 265-279 [doi]

2016

NEEMP: software for validation, accurate calculation and fast parameterization of EEM chargesTomás Racek, Jana Pazúriková, Radka Svobodová Vareková, Stanislav Geidl, Ales Krenek, Francesco L. Falginella, Vladimír Horský, Václav Hejret, Jaroslav Koca. jcheminf, 8(1), 2016. [doi]

2015

High-quality and universal empirical atomic charges for chemoinformatics applicationsStanislav Geidl, Tomás Bouchal, Tomás Racek, Radka Svobodová Vareková, Václav Hejret, Ales Krenek, Ruben Abagyan, Jaroslav Koca. jcheminf, 7, 2015. [doi]

2014

Empirical charges for chemoinformatics applicationsTomás Bouchal, Radka Svobodová Vareková, Tomás Racek, Crina-Maria Ionescu, Stanislav Geidl, Ales Krenek, Jaroslav Koca. jcheminf, 6(S-1):60, 2014. [doi]

2013

Nemesis - a molecular modeling packageJakub Stepán, Petr Kulhánek, Milan Lenco, Zora Strelcová, Ales Krenek, Jaroslav Koca. jcheminf, 5(S-1):12, 2013. [doi]

2010

Compression of Vector Field Changing in TimeTomas Golembiovsky, Ales Krenek. memics 2011: 40-46 [doi]

2008

gLite Job Provenance - a job-centric viewAles Krenek, Jirí Sitera, Ludek Matyska, Frantisek Dvorák, Milos Mulac, Miroslav Ruda, Zdenek Salvet. concurrency, 20(5):453-462, 2008. [doi]

Multiple Ligand Trajectory Docking Study - Semiautomatic Analysis of Molecular Dynamics Simulations using EGEE gLite ServicesAles Krenek, Martin Petrek, Jan Kmunícek, Jiri Filipovic, Zdenek Sustr, Frantisek Dvorák, Jirí Sitera, Jiri Wiesner, Ludek Matyska. pdp 2008: 447-454 [doi]

Job Provenance - Insight into Very Large Provenance DatasetsAles Krenek, Ludek Matyska, Jirí Sitera, Miroslav Ruda, Frantisek Dvorák, Jiri Filipovic, Zdenek Sustr, Zdenek Salvet. ipaw 2008: 144-151 [doi]

Special Issue: The First Provenance ChallengeLuc Moreau, Bertram Ludäscher, Ilkay Altintas, Roger S. Barga, Shawn Bowers, Steven P. Callahan, George Chin Jr., Ben Clifford, Shirley Cohen, Sarah Cohen Boulakia, Susan B. Davidson, Ewa Deelman, Luciano A. Digiampietri, Ian T. Foster, Juliana Freire, James Frew, Joe Futrelle, Tara Gibson, Yolanda Gil, Carole A. Goble, Jennifer Golbeck, Paul T. Groth, David A. Holland, Sheng Jiang, Jihie Kim, David Koop, Ales Krenek, Timothy M. McPhillips, Gaurang Mehta, Simon Miles, Dominic Metzger, Steve Munroe, Jim Myers, Beth Plale, Norbert Podhorszki, Varun Ratnakar, Emanuele Santos, Carlos Eduardo Scheidegger, Karen Schuchardt, Margo I. Seltzer, Yogesh L. Simmhan, Cláudio T. Silva, Peter Slaughter, Eric G. Stephan, Robert Stevens, Daniele Turi, Huy T. Vo, Michael Wilde, Jun Zhao, Yong Zhao. concurrency, 20(5):409-418, 2008. [doi]

Special Issue: The First Provenance ChallengeLuc Moreau, Bertram Ludäscher, Ilkay Altintas, Roger S. Barga, Shawn Bowers, Steven P. Callahan, George Chin Jr., Ben Clifford, Shirley Cohen, Sarah Cohen Boulakia, Susan B. Davidson, Ewa Deelman, Luciano A. Digiampietri, Ian T. Foster, Juliana Freire, James Frew, Joe Futrelle, Tara Gibson, Yolanda Gil, Carole A. Goble, Jennifer Golbeck, Paul T. Groth, David A. Holland, Sheng Jiang, Jihie Kim, David Koop, Ales Krenek, Timothy M. McPhillips, Gaurang Mehta, Simon Miles, Dominic Metzger, Steve Munroe, Jim Myers, Beth Plale, Norbert Podhorszki, Varun Ratnakar, Emanuele Santos, Carlos Eduardo Scheidegger, Karen Schuchardt, Margo I. Seltzer, Yogesh L. Simmhan, Cláudio T. Silva, Peter Slaughter, Eric G. Stephan, Robert Stevens, Daniele Turi, Huy T. Vo, Michael Wilde, Jun Zhao 0003, Yong Zhao. concurrency, 20(5):409-418, 2008. [doi]

2007

A uniform job monitoring service in multiple job universesMiroslav Ruda, Ales Krenek, Milos Mulac, Jan Pospísil, Zdenek Sustr. hpdc 2007: 17-22 [doi]

2006

gLite Job ProvenanceFrantisek Dvorák, Daniel Kouril, Ales Krenek, Ludek Matyska, Milos Mulac, Jan Pospísil, Miroslav Ruda, Zdenek Salvet, Jirí Sitera, Michal Vocu. ipaw 2006: 246-253 [doi]

2005

Best Practices of User Account Management with Virtual Organization Based Access to GridJirí Denemark, Michal Jankowski, Ales Krenek, Ludek Matyska, Norbert Meyer, Miroslav Ruda, Pawel Wolniewicz. ppam 2006: 633-642 [doi]

Haptically Driven Travelling through Conformational SpaceIgor Peterlík, Ales Krenek. haptics 2005: 342-347 [doi]

2004

2003

Building 3D State Spaces of Virtual Environments with a TDS-Based AlgorithmAles Krenek, Igor Peterlík, Ludek Matyska. pvm 2003: 529-536 [doi]

Haptic Rendering of Complex Force FieldsAles Krenek. egve 2003: 231-240 [doi]

2001

2000

Handling Cycles in Conformational Behaviour VisualizationAles Krenek. wscg 2000: [doi]

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