Christian M. Zmasek - researchr alias

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Viewing Publication 1 - 16 from 16

2023

2022

Early detection of emerging SARS-CoV-2 variants of interest for experimental evaluationZachary S. Wallace, James J. Davis 0002, Anna Maria Niewiadomska, Robert D. Olson, Maulik Shukla, Rick Stevens, Yun Zhang, Christian M. Zmasek, Richard H. Scheuermann. fbinf, 2, 2022. [doi]

2017

2014

Structural genomics analysis of uncharacterized protein families overrepresented in human gut bacteria identifies a novel glycoside hydrolaseAnna Sheydina, Ruth Y. Eberhardt, Daniel J. Rigden, Yuanyuan Chang, Zhanwen Li, Christian M. Zmasek, Herbert L. Axelrod, Adam Godzik. bmcbi, 15:112, 2014. [doi]

2013

2012

Déjà Vu Feeling - Analysis of Multidomain Protein Evolution in Eukaryotic GenomesChristian M. Zmasek, Adam Godzik. ploscb, 8(11), 2012. [doi]

2011

TOPSAN: a dynamic web database for structural genomicsKyle Ellrott, Christian M. Zmasek, Dana Weekes, S. Sri Krishna, Constantina Bakolitsa, Adam Godzik, John Wooley. nar, 39(Database-Issue):494-496, 2011. [doi]

GreenPhylDB v2.0: comparative and functional genomics in plantsMathieu Rouard, Valentin Guignon, Christelle Aluome, Marie-Angélique Laporte, Gaëtan Droc, Christian Walde, Christian M. Zmasek, Christophe Périn, Matthieu G. Conte. nar, 39(Database-Issue):1095-1102, 2011. [doi]

2010

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflowsToshiaki Katayama, Kazuharu Arakawa, Mitsuteru Nakao, Keiichiro Ono, Kiyoko F. Aoki-Kinoshita, Yasunori Yamamoto, Atsuko Yamaguchi, Shuichi Kawashima, Hong-Woo Chun, Jan Aerts, Bruno Aranda, Lord H. Barboza, Raoul J. P. Bonnal, Richard M. Bruskiewich, Jan Christian Bryne, José M. Fernández, Akira Funahashi, Paul M. K. Gordon, Naohisa Goto, Andreas Groscurth, Alex Gutteridge, Richard C. G. Holland, Yoshinobu Kano, Edward A. Kawas, Arnaud Kerhornou, Eri Kibukawa, Akira R. Kinjo, Michael Kuhn 0004, Hilmar Lapp, Heikki Lehväslaiho, Hiroyuki Nakamura, Yasukazu Nakamura, Tatsuya Nishizawa, Chikashi Nobata, Tamotsu Noguchi, Thomas M. Oinn, Shinobu Okamoto, Stuart Owen, Evangelos Pafilis, Matthew R. Pocock, Pjotr Prins, René Ranzinger, Florian Reisinger, Lukasz Salwínski, Mark J. Schreiber, Martin Senger, Yasumasa Shigemoto, Daron M. Standley, Hideaki Sugawara, Toshiyuki Tashiro, Oswaldo Trelles, Rutger A. Vos, Mark D. Wilkinson, William S. York, Christian M. Zmasek, Kiyoshi Asai, Toshihisa Takagi. biomedsem, 1:8, 2010. [doi]

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflowsToshiaki Katayama, Kazuharu Arakawa, Mitsuteru Nakao, Keiichiro Ono, Kiyoko F. Aoki-Kinoshita, Yasunori Yamamoto, Atsuko Yamaguchi, Shuichi Kawashima, Hong-Woo Chun, Jan Aerts, Bruno Aranda, Lord H. Barboza, Raoul J. P. Bonnal, Richard M. Bruskiewich, Jan Christian Bryne, José M. Fernández, Akira Funahashi, Paul M. K. Gordon, Naohisa Goto, Andreas Groscurth, Alex Gutteridge, Richard C. G. Holland, Yoshinobu Kano, Edward A. Kawas, Arnaud Kerhornou, Eri Kibukawa, Akira R. Kinjo, Michael Kuhn 0004, Hilmar Lapp, Heikki Lehväslaiho, Hiroyuki Nakamura, Yasukazu Nakamura, Tatsuya Nishizawa, Chikashi Nobata, Tamotsu Noguchi, Thomas M. Oinn, Shinobu Okamoto, Stuart Owen, Evangelos Pafilis, Matthew R. Pocock, Pjotr Prins, René Ranzinger, Florian Reisinger, Lukasz Salwínski, Mark J. Schreiber, Martin Senger, Yasumasa Shigemoto, Daron M. Standley, Hideaki Sugawara, Toshiyuki Tashiro, Oswaldo Trelles, Rutger A. Vos, Mark D. Wilkinson, William York, Christian M. Zmasek, Kiyoshi Asai, Toshihisa Takagi. biomedsem, 1:8, 2010. [doi]

2009

phyloXML: XML for evolutionary biology and comparative genomicsMira V. Han, Christian M. Zmasek. bmcbi, 10:356, 2009. [doi]

2004

LumberJack: a heuristic tool for sequence alignment exploration and phylogenetic inferenceCarolyn J. Lawrence, Christian M. Zmasek, R. Kelly Dawe, Russell L. Malmberg. bioinformatics, 20(12):1977-1979, 2004. [doi]

2002

RIO: Analyzing proteomes by automated phylogenomics using resampled inference of orthologsChristian M. Zmasek, Sean R. Eddy. bmcbi, 3:14, 2002. [doi]

2001

ATV: display and manipulation of annotated phylogeneticChristian M. Zmasek, Sean R. Eddy. bioinformatics, 17(4):383-384, 2001.

A simple algorithm to infer gene duplication and speciation events on a gene treeChristian M. Zmasek, Sean R. Eddy. bioinformatics, 17(9):821-828, 2001.

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