Yasunori Yamamoto - researchr alias

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Viewing Publication 1 - 69 from 69

2023

A Comparative Study on Storing and Retrieval of URIs for Life Sciences DatabasesAtsuko Yamaguchi, Yasunori Yamamoto. jist 2024: 9-12 [doi]

Towards Semantic Data Management of Visual Computing Datasets: Increasing Usability of MetaVDYasunori Yamamoto, Shusaku Egami, Yuya Yoshikawa, Ken Fukuda. semweb 2024: [doi]

To build densely connected Web of RDF dataYasunori Yamamoto, Takatomo Fujisawa. swat4ls 2023: 120-121 [doi]

2022

TogoID: an exploratory ID converter to bridge biological datasetsShuya Ikeda, Hiromasa Ono, Tazro Ohta, Hirokazu Chiba, Yuki Naito, Yuki Moriya, Shuichi Kawashima, Yasunori Yamamoto, Shinobu Okamoto, Susumu Goto, Toshiaki Katayama. bioinformatics, 38(17):4194-4199, 2022. [doi]

2021

Computation of Infection Risk via Confidential Locational Entries: A Precedent Approach for Contact Tracing With Privacy ProtectionJunko Ami, Kunihiro Ishii, Yoshihide Sekimoto, Hiroshi Masui, Ikki Ohmukai, Yasunori Yamamoto, Takashi Okumura. access, 9:87420-87433, 2021. [doi]

2020

Tracing patient PLOD by mobile phones Mitigation of epidemic risks based on patient locational open dataIkki Ohmukai, Yasunori Yamamoto, Maori Ito, Takashi Okumura. wetice 2020: 283-286 [doi]

BioHackathon 2015: Semantics of data for life sciences and reproducible researchRutger A. Vos, Toshiaki Katayama, Hiroyuki Mishima, Shin Kawano, Shuichi Kawashima, Jin-Dong Kim, Yuki Moriya, Toshiaki Tokimatsu, Atsuko Yamaguchi, Yasunori Yamamoto, Hongyan Wu, Peter Amstutz, Erick Antezana, Nobuyuki P. Aoki, Kazuharu Arakawa, Jerven T. Bolleman, Evan E. Bolton, Raoul Jean Pierre Bonnal, Hidemasa Bono, Kees Burger, Hirokazu Chiba, Kevin Bretonnel Cohen, Eric W. Deutsch, Jesualdo Tomás Fernández-Breis, Gang Fu, Takatomo Fujisawa, Atsushi Fukushima, Alexander García Castro, Naohisa Goto, Tudor Groza, Colin Hercus, Robert Hoehndorf, Kotone Itaya, Nick S. Juty, Takeshi Kawashima, Jee-Hyub Kim, Akira R. Kinjo, Masaaki Kotera, Kouji Kozaki, Sadahiro Kumagai, Tatsuya Kushida, Thomas Lütteke, Masaaki Matsubara, Joe Miyamoto, Attayeb Mohsen, Hiroshi Mori, Yuki Naito, Takeru Nakazato, Jeremy NguyenXuan, Kozo Nishida, Naoki Nishida, Hiroyo Nishide, Soichi Ogishima, Tazro Ohta, Shujiro Okuda, Benedict Paten, Jean-Luc Perret, Philip Prathipati, Pjotr Prins, Núria Queralt-Rosinach, Daisuke Shinmachi, Shinya Suzuki, Tsuyosi Tabata, Terue Takatsuki, Kieron R. Taylor, Mark Thompson 0002, Ikuo Uchiyama, Bruno Vieira, Chih-Hsuan Wei, Mark D. Wilkinson, Issaku Yamada, Ryota Yamanaka, Kazutoshi Yoshitake, Akiyasu C. Yoshizawa, Michel Dumontier, Kenjiro Kosaki, Toshihisa Takagi. f1000research, 9:136, 2020. [doi]

2019

BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and servicesToshiaki Katayama, Shuichi Kawashima, Gos Micklem, Shin Kawano, Jin-Dong Kim, Simon Kocbek, Shinobu Okamoto, Yue Wang 0040, Hongyan Wu, Atsuko Yamaguchi, Yasunori Yamamoto, Erick Antezana, Kiyoko F. Aoki-Kinoshita, Kazuharu Arakawa, Masaki Banno, Joachim Baran, Jerven T. Bolleman, Raoul Jean Pierre Bonnal, Hidemasa Bono, Jesualdo Tomás Fernández-Breis, Robert M. Buels, Matthew P. Campbell, Hirokazu Chiba, Peter J. A. Cock, Kevin Bretonnel Cohen, Michel Dumontier, Takatomo Fujisawa, Toyofumi Fujiwara, Leyla J. García, Pascale Gaudet, Emi Hattori, Robert Hoehndorf, Kotone Itaya, Maori Ito, Daniel Jamieson, Simon Jupp, Nick S. Juty, Alex Kalderimis, Fumihiro Kato, Hideya Kawaji, Takeshi Kawashima, Akira R. Kinjo, Yusuke Komiyama, Masaaki Kotera, Tatsuya Kushida, James Malone, Masaaki Matsubara, Satoshi Mizuno, Sayaka Mizutani, Hiroshi Mori, Yuki Moriya, Katsuhiko Murakami, Takeru Nakazato, Hiroyo Nishide, Yosuke Nishimura, Soichi Ogishima, Tazro Ohta, Shujiro Okuda, Hiromasa Ono, Yasset Pérez-Riverol, Daisuke Shinmachi, Andrea Splendiani, Francesco Strozzi, Shinya Suzuki, Junichi Takehara, Mark Thompson 0002, Toshiaki Tokimatsu, Ikuo Uchiyama, Karin Verspoor, Mark D. Wilkinson, Sarala M. Wimalaratne, Issaku Yamada, Nozomi Yamamoto, Masayuki Yarimizu, Shoko Kawamoto, Toshihisa Takagi. f1000research, 8:1677, 2019. [doi]

Integrated Growth Media Database by Standardizing Ingredient InformationShuichi Kawashima, Toshiaki Katayama, Yuki Moriya, Shinobu Okamoto, Yasunori Yamamoto, Susumu Goto. swat4ls 2019: 165-166 [doi]

UmakaData Extension: Toward Realization of a Practical SPARQL Endpoint Discovery Service for Life SciencesNorio Kobayashi, Yasunori Yamamoto, Atsuko Yamaguchi. swat4ls 2019: 151-152 [doi]

Building Knowledge Graph Across Different Subdomains Using Interlinking Ontology for Biomedical ConceptsKouji Kozaki, Tatsuya Kushida, Yasunori Yamamoto, Toshihisa Takagi. jist 2020: 182-190 [doi]

Reconstruction of Hierarchical Structures in a Thesaurus-based Ontology through Curation by Domain ExpertsTatsuya Kushida, Kouji Kozaki, Yasunori Yamamoto, Atsuko Yamaguchi, Takahiro Kawamura, Takako Nakagawa, Yuka Tateisi, Toshihisa Takagi. icbo 2021: 1 [doi]

Interconnection of Biological Knowledge Using NikkajiRDF and Interlinking Ontology for Biological ConceptsTatsuya Kushida, Kouji Kozaki, Takahiro Kawamura, Yuka Tateisi, Yasunori Yamamoto, Toshihisa Takagi. ngc, 37(4):525-549, 2019. [doi]

Lane-change detection based on individual driving styleHanwool Woo, Yonghoon Ji, Yusuke Tamura, Yasuhide Kuroda, Takashi Sugano, Yasunori Yamamoto, Atsushi Yamashita, Hajime Asama. ar, 33(20):1087-1098, 2019. [doi]

Investigating Schema Definitions Using RDFS and OWL 2 for RDF Databases in Life SciencesAtsuko Yamaguchi, Tatsuya Kushida, Yasunori Yamamoto, Kouji Kozaki. jist 2020: 137-144 [doi]

Finding RDF Data you need by Umaka SuiteYasunori Yamamoto, Atsuko Yamaguchi. swat4ls 2019: 157-158 [doi]

2018

2017

Driver classification in vehicle following behavior by using dynamic potential field methodHanwool Woo, Yonghoon Ji, Yusuke Tamura, Yasuhide Kuroda, Takashi Sugano, Yasunori Yamamoto, Atsushi Yamashita, Hajime Asama. itsc 2017: 1-6 [doi]

Lane-Change Detection Based on Vehicle-Trajectory PredictionHanwool Woo, Yonghoon Ji, Hitoshi Kono, Yusuke Tamura, Yasuhide Kuroda, Takashi Sugano, Yasunori Yamamoto, Atsushi Yamashita, Hajime Asama. ral, 2(2):1109-1116, 2017. [doi]

LOD Surfer API: Web API for LOD Surfing Using Class-Class Relationships in Life SciencesAtsuko Yamaguchi, Kouji Kozaki, Yasunori Yamamoto, Hiroshi Masuya, Norio Kobayashi. swat4ls 2018: [doi]

Semantic Graph Analysis for Federated LOD Surfing in Life SciencesAtsuko Yamaguchi, Kouji Kozaki, Yasunori Yamamoto, Hiroshi Masuya, Norio Kobayashi. jist 2017: 268-276 [doi]

2016

Dynamic potential-model-based feature for lane change predictionHanwool Woo, Yonghoon Ji, Hitoshi Kono, Yusuke Tamura, Yasuhide Kuroda, Takashi Sugano, Yasunori Yamamoto, Atsushi Yamashita, Hajime Asama. SMC 2016: 838-843 [doi]

Semantic Data Acquisition by Traversing Class-Class Relationships Over Linked Open DataAtsuko Yamaguchi, Kouji Kozaki, Kai Lenz, Yasunori Yamamoto, Hiroshi Masuya, Norio Kobayashi. jist 2016: 136-151 [doi]

SPARQL Query Construction with Monitoring Service for EndpointsAtsuko Yamaguchi, Yasunori Yamamoto, Kouji Kozaki, Kai Lenz, Hiroshi Masuya, Norio Kobayashi. swat4ls 2017: [doi]

Data Acquisition by Traversing Class-Class Relationships over the Linked Open DataAtsuko Yamaguchi, Kouji Kozaki, Kai Lenz, Yasunori Yamamoto, Hiroshi Masuya, Norio Kobayashi. semweb 2016: [doi]

SPARQL Builder: Constructing SPARQL Query by Traversing Class-Class Relationships for Life Science DatabasesAtsuko Yamaguchi, Kouji Kozaki, Kai Lenz, Yasunori Yamamoto, Hiroshi Masuya, Norio Kobayashi. jist 2016: 58-61 [doi]

Umaka-Yummy Data: Where Providers and Consumers in Life Sciences Communicate with Each OtherYasunori Yamamoto, Atsuko Yamaguchi, Andrea Splendiani. jist 2016: 50-53 [doi]

Umaka-Yummy Data: A Place to Facilitate Communication between Data Providers and ConsumersYasunori Yamamoto, Atsuko Yamaguchi, Andrea Splendiani. swat4ls 2017: [doi]

2015

2014

BioBenchmark Toyama 2012: an evaluation of the performance of triple stores on biological dataHongyan Wu, Toyofumi Fujiwara, Yasunori Yamamoto, Jerven Bolleman, Atsuko Yamaguchi. biomedsem, 5:32, 2014. [doi]

A SPARQL Endpoint Profiler for an Efficient Question Answering SystemYasunori Yamamoto. swat4ls 2014: [doi]

2013

The Genia Event Extraction Shared Task, 2013 Edition - OverviewJin-Dong Kim, Yue Wang, Yasunori Yamamoto. bionlp 2013: 8-15 [doi]

Common Metadata to Search for Non-digital Cultural Resources in Heterogeneous DatabasesYasunori Yamamoto, Fumio Adachi, Kozaburo Hachimura. culture 2013: 224-225 [doi]

Building Linked Open Data towards integration of biomedical scientific literature with DBpediaYasunori Yamamoto, Atsuko Yamaguchi, Akinori Yonezawa. biomedsem, 4:8, 2013. [doi]

2012

YummyData: Measuring the "Sparkliness" of Biomedical Sparql EndpointsAndrea Splendiani, Johan Nystromm-Persson, Michel Dumontier, Yasunori Yamamoto. swat4ls 2012: [doi]

Building Linked Open Data of Life Science DictionaryYasunori Yamamoto, Shoko Kawamoto. swat4ls 2012: [doi]

2011

The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applicationsToshiaki Katayama, Mark D. Wilkinson, Rutger A. Vos, Takeshi Kawashima, Shuichi Kawashima, Mitsuteru Nakao, Yasunori Yamamoto, Hong-Woo Chun, Atsuko Yamaguchi, Shin Kawano, Jan Aerts, Kiyoko F. Aoki-Kinoshita, Kazuharu Arakawa, Bruno Aranda, Raoul J. P. Bonnal, José M. Fernández, Takatomo Fujisawa, Paul M. K. Gordon, Naohisa Goto, Syed Haider, Todd Harris, Takashi Hatakeyama, Isaac Ho, Masumi Itoh, Arek Kasprzyk, Nobuhiro Kido, Young-Joo Kim, Akira R. Kinjo, Fumikazu Konishi, Yulia Kovarskaya, Gregory Von Kuster, Alberto Labarga, Vachiranee Limviphuvadh, E. Luke McCarthy, Yasukazu Nakamura, Yunsun Nam, Kozo Nishida, Kunihiro Nishimura, Tatsuya Nishizawa, Soichi Ogishima, Tom Oinn, Shinobu Okamoto, Shujiro Okuda, Keiichiro Ono, Kazuki Oshita, Keun-Joon Park, Nicholas Putnam, Martin Senger, Jessica Severin, Yasumasa Shigemoto, Hideaki Sugawara, James Taylor, Oswaldo Trelles, Chisato Yamasaki, Riu Yamashita, Noriyuki Satoh, Toshihisa Takagi. biomedsem, 2:4, 2011. [doi]

The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applicationsToshiaki Katayama, Mark D. Wilkinson, Rutger A. Vos, Takeshi Kawashima, Shuichi Kawashima, Mitsuteru Nakao, Yasunori Yamamoto, Hong-Woo Chun, Atsuko Yamaguchi, Shin Kawano, Jan Aerts, Kiyoko F. Aoki-Kinoshita, Kazuharu Arakawa, Bruno Aranda, Raoul J. P. Bonnal, José M. Fernández, Takatomo Fujisawa, Paul M. K. Gordon, Naohisa Goto, Syed Haider, Todd W. Harris, Takashi Hatakeyama, Isaac Ho, Masumi Itoh, Arek Kasprzyk, Nobuhiro Kido, Young-Joo Kim, Akira R. Kinjo, Fumikazu Konishi, Yulia Kovarskaya, Gregory Von Kuster, Alberto Labarga, Vachiranee Limviphuvadh, E. Luke McCarthy, Yasukazu Nakamura, Yunsun Nam, Kozo Nishida, Kunihiro Nishimura, Tatsuya Nishizawa, Soichi Ogishima, Tom Oinn, Shinobu Okamoto, Shujiro Okuda, Keiichiro Ono, Kazuki Oshita, Keun-Joon Park, Nicholas Putnam, Martin Senger, Jessica Severin, Yasumasa Shigemoto, Hideaki Sugawara, James Taylor, Oswaldo Trelles, Chisato Yamasaki, Riu Yamashita, Noriyuki Satoh, Toshihisa Takagi. biomedsem, 2:4, 2011. [doi]

Discriminative Optimization of String Similarity and Its Application to Biomedical Abbreviation ClusteringAtsuko Yamaguchi, Yasunori Yamamoto, Jin-Dong Kim, Toshihisa Takagi, Akinori Yonezawa. icmla 2011: 72-77 [doi]

Discriminative Application of String Similarity Methods to Chemical and Non-chemical Names for Biomedical Abbreviation ClusteringAtsuko Yamaguchi, Yasunori Yamamoto, Jin-Dong Kim, Toshihisa Takagi, Akinori Yonezawa. bibm 2011: 544-549 [doi]

Building linked open data using approximate string matching methods and domain specific resourcesYasunori Yamamoto, Atsuko Yamaguchi, Akinori Yonezawa. swat4ls 2011: 121-122 [doi]

Allie: a database and a search service of abbreviations and long formsYasunori Yamamoto, Atsuko Yamaguchi, Hidemasa Bono, Toshihisa Takagi. biodb, 2011, 2011. [doi]

2010

Figure classification in biomedical literature to elucidate disease mechanisms, based on pathwaysNatsu Ishii, Asako Koike, Yasunori Yamamoto, Toshihisa Takagi. artmed, 49(3):135-143, 2010. [doi]

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflowsToshiaki Katayama, Kazuharu Arakawa, Mitsuteru Nakao, Keiichiro Ono, Kiyoko F. Aoki-Kinoshita, Yasunori Yamamoto, Atsuko Yamaguchi, Shuichi Kawashima, Hong-Woo Chun, Jan Aerts, Bruno Aranda, Lord H. Barboza, Raoul J. P. Bonnal, Richard M. Bruskiewich, Jan Christian Bryne, José M. Fernández, Akira Funahashi, Paul M. K. Gordon, Naohisa Goto, Andreas Groscurth, Alex Gutteridge, Richard C. G. Holland, Yoshinobu Kano, Edward A. Kawas, Arnaud Kerhornou, Eri Kibukawa, Akira R. Kinjo, Michael Kuhn 0004, Hilmar Lapp, Heikki Lehväslaiho, Hiroyuki Nakamura, Yasukazu Nakamura, Tatsuya Nishizawa, Chikashi Nobata, Tamotsu Noguchi, Thomas M. Oinn, Shinobu Okamoto, Stuart Owen, Evangelos Pafilis, Matthew R. Pocock, Pjotr Prins, René Ranzinger, Florian Reisinger, Lukasz Salwínski, Mark J. Schreiber, Martin Senger, Yasumasa Shigemoto, Daron M. Standley, Hideaki Sugawara, Toshiyuki Tashiro, Oswaldo Trelles, Rutger A. Vos, Mark D. Wilkinson, William York, Christian M. Zmasek, Kiyoshi Asai, Toshihisa Takagi. biomedsem, 1:8, 2010. [doi]

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflowsToshiaki Katayama, Kazuharu Arakawa, Mitsuteru Nakao, Keiichiro Ono, Kiyoko F. Aoki-Kinoshita, Yasunori Yamamoto, Atsuko Yamaguchi, Shuichi Kawashima, Hong-Woo Chun, Jan Aerts, Bruno Aranda, Lord H. Barboza, Raoul J. P. Bonnal, Richard M. Bruskiewich, Jan Christian Bryne, José M. Fernández, Akira Funahashi, Paul M. K. Gordon, Naohisa Goto, Andreas Groscurth, Alex Gutteridge, Richard C. G. Holland, Yoshinobu Kano, Edward A. Kawas, Arnaud Kerhornou, Eri Kibukawa, Akira R. Kinjo, Michael Kuhn 0004, Hilmar Lapp, Heikki Lehväslaiho, Hiroyuki Nakamura, Yasukazu Nakamura, Tatsuya Nishizawa, Chikashi Nobata, Tamotsu Noguchi, Thomas M. Oinn, Shinobu Okamoto, Stuart Owen, Evangelos Pafilis, Matthew R. Pocock, Pjotr Prins, René Ranzinger, Florian Reisinger, Lukasz Salwínski, Mark J. Schreiber, Martin Senger, Yasumasa Shigemoto, Daron M. Standley, Hideaki Sugawara, Toshiyuki Tashiro, Oswaldo Trelles, Rutger A. Vos, Mark D. Wilkinson, William S. York, Christian M. Zmasek, Kiyoshi Asai, Toshihisa Takagi. biomedsem, 1:8, 2010. [doi]

Natural Language Query Processing for Life Science Knowledge - Position PaperJin-Dong Kim, Yasunori Yamamoto, Atsuko Yamaguchi, Mitsuteru Nakao, Kenta Oouchida, Hong-Woo Chun, Toshihisa Takagi. amt 2010: 158-165 [doi]

2008

Figure Classification in Biomedical Literature towards Figure MiningNatsu Ishii, Asako Koike, Yasunori Yamamoto, Toshihisa Takagi. bibm 2008: 263-269 [doi]

2007

OReFiL: an online resource finder for life sciencesYasunori Yamamoto, Toshihisa Takagi. bmcbi, 8, 2007. [doi]

Biomedical knowledge navigation by literature clusteringYasunori Yamamoto, Toshihisa Takagi. jbi, 40(2):114-130, 2007. [doi]

2005

A Sentence Classification System for Multi Biomedical Literature SummarizationYasunori Yamamoto, Toshihisa Takagi. icde 2005: 1163 [doi]

2004

A Practical Partial Parser for Biomedical Literature SummarizationYasunori Yamamoto, Toshihisa Takagi. nlucs 2004: 75-85

2003

A Method to Retrieve Papers from MEDLINE: PETER SystemHiroko Ao, Yasunori Yamamoto, Toshihisa Takagi. trec 2003: 806-809 [doi]

Sign Language Synthesis for the Mobile EnvironmentsSeiji Igi, Mitsue Tamaru, Yasunori Yamamoto, Megumu Ujitani, Shigeharu Sugita. wscg 2003: [doi]

2002

Market-based Network Formation for an Ad Hoc P2P Wireless NetworkYasunori Yamamoto, Junseok Hwang. ifip6-8 2002: 21-28

1997

A Hierarchy of Uniquely Parsable Grammar Classes and Deterministic AcceptorsKenichi Morita, Noritaka Nishihara, Yasunori Yamamoto, Zhiguo Zhang. ACTA, 34(5):389-410, 1997.

Automatic Construction of Knowledge Base from Biological PapersYoshihiro Ohta, Yasunori Yamamoto, Tomoko Okazaki, Ikuo Uchiyama, Toshihisa Takagi. ismb 1997: 218-225

1992

Two-Dimensional Uniquely Parsable Isometric Array GrammarsYasunori Yamamoto, Kenichi Morita. ijprai, 6(2&3):301-313, 1992.

1989

Two-Dimensional Three-Way Array Grammars and their AcceptorsKenichi Morita, Yasunori Yamamoto, Kazuhiro Sugata. In Patrick S. P. Wang, editor, Array Grammars, Patterns and Recognizers. Volume 18 of World Scientific Series in Computer Science, pages 75-98, World Scientific, 1989. [doi]

Two-Dimensional Three-Way Array Grammars and their AcceptorsKenichi Morita, Yasunori Yamamoto, Kazuhiro Sugata. ijprai, 3(3-4):353-376, 1989. [doi]

Context-sensitivity of Two-Dimensional Regular Array GrammarsYasunori Yamamoto, Kenichi Morita, Kazuhiro Sugata. In Patrick S. P. Wang, editor, Array Grammars, Patterns and Recognizers. Volume 18 of World Scientific Series in Computer Science, pages 17-42, World Scientific, 1989. [doi]

Context-sensitivity of Two-Dimensional Regular Array GrammarsYasunori Yamamoto, Kenichi Morita, Kazuhiro Sugata. ijprai, 3(3-4):295-320, 1989. [doi]

1983

The complexity of some decision problems about two-dimensional array grammarsKenichi Morita, Yasunori Yamamoto, Kazuhiro Sugata. isci, 30(3):241-262, 1983. [doi]

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