Jean-Marc Schwartz - researchr alias

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Viewing Publication 1 - 28 from 28

2024

HIHISIV: a database of gene expression in HIV and SIV host immune responseRaquel Lopes Costa, Luiz M. R. Gadelha Jr., Mirela D'arc, Marcelo Ribeiro-Alves, David L. Robertson, Jean-Marc Schwartz, Marcelo A. Soares, Fábio Porto 0001. bmcbi, 25(1):125, December 2024. [doi]

2022

SubcellulaRVis: a web-based tool to simplify and visualise subcellular compartment enrichmentJoanne Watson, Michael Smith, Chiara Francavilla, Jean-Marc Schwartz. nar, 50(W1):718-725, 2022. [doi]

2021

Combinatorial mathematical modelling approaches to interrogate rear retraction dynamics in 3D cell migrationJoseph H. R. Hetmanski, Matthew C. Jones, Fatima Chunara, Jean-Marc Schwartz, Patrick T. Caswell. ploscb, 17(3), 2021. [doi]

2019

Modelling the role of dual specificity phosphatases in herceptin resistant breast cancer cell linesPetronela Buiga, Ari Elson, Lydia Tabernero, Jean-Marc Schwartz. CANDC, 80:138-146, 2019. [doi]

SkeletalVis: an exploration and meta-analysis data portal of cross-species skeletal transcriptomics dataJamie Soul, Tim E. Hardingham, Ray P. Boot-Handford, Jean-Marc Schwartz. bioinformatics, 35(13):2283-2290, 2019. [doi]

2018

2017

Insight into glucocorticoid receptor signalling through interactome model analysisEmyr Bakker, Kun Tian, Luciano Mutti, Constantinos Demonacos, Jean-Marc Schwartz, Marija Krstic-Demonacos. ploscb, 13(11), 2017. [doi]

Cyclic decomposition explains a photosynthetic down regulation for Chlamydomonas reinhardtiiStephen P. Chapman, Marcelo Trindade dos Santos, Giles N. Johnson, Mauricio Vieira Kritz, Jean-Marc Schwartz. biosystems, 162:119-127, 2017. [doi]

2016

A MAPK-Driven Feedback Loop Suppresses Rac Activity to Promote RhoA-Driven Cancer Cell InvasionJoseph H. R. Hetmanski, Egor Zindy, Jean-Marc Schwartz, Patrick T. Caswell. ploscb, 12(5), 2016. [doi]

PhenomeScape: a cytoscape app to identify differentially regulated sub-networks using known disease associationsJamie Soul, Sara L. Dunn, Tim E. Hardingham, Ray P. Boot-Handford, Jean-Marc Schwartz. bioinformatics, 32(24):3847-3849, 2016. [doi]

2015

A logical model of HIV-1 interactions with the T-cell activation signalling pathwayOyebode J. Oyeyemi, Oluwafemi Davies, David L. Robertson, Jean-Marc Schwartz. bioinformatics, 31(7):1075-1083, 2015. [doi]

2014

Applications of p53 interactome analysis to personalised drug discoveryMichelle Hussain, Benjamin Stutchbury, Kun Tian, Rengul Atalay, Jean-Marc Schwartz, Marija Krstic-Demonacos. iwbbio 2014: 192-203 [doi]

In silico prediction of elementary mode fluxesJean-Marc Schwartz, Peter Neal Taylor. iwbbio 2014: 183-191 [doi]

2013

PathNER: a tool for systematic identification of biological pathway mentions in the literatureChengkun Wu, Jean-Marc Schwartz, Goran Nenadic. bmcsb, 7(S-3), 2013. [doi]

2012

Neurospora Circadian Clock and Its Temperature CompensationYu-Yao Tseng, Suzanne M. Hunt, Christian Heintzen, Susan K. Crosthwaite, Jean-Marc Schwartz. ploscb, 8(3), 2012. [doi]

Exploring the genetic control of glycolytic oscillations in Saccharomyces CerevisiaeThomas Williamson, Delali A. Adiamah, Jean-Marc Schwartz, Lubomira Stateva. bmcsb, 6:108, 2012. [doi]

2010

Streamlining the construction of large-scale dynamic models using generic kinetic equationsDelali A. Adiamah, Julia Handl, Jean-Marc Schwartz. bioinformatics, 26(10):1324-1331, 2010. [doi]

Integration of metabolic databases for the reconstruction of genome-scale metabolic networksKarin Radrich, Yoshimasa Tsuruoka, Paul D. Dobson, Albert Gevorgyan, Neil Swainston, Gino Baart, Jean-Marc Schwartz. bmcsb, 4:114, 2010. [doi]

2009

Deterministic mathematical models of the cAMP pathway in Saccharomyces cerevisiaeThomas Williamson, Jean-Marc Schwartz, Douglas B. Kell, Lubomira Stateva. bmcsb, 3:70, 2009. [doi]

2006

Identification of metabolic units induced by environmental signalsJose C. Nacher, Jean-Marc Schwartz, Minoru Kanehisa, Tatsuya Akutsu. ismb 2006: 375-383 [doi]

Quantitative elementary mode analysis of metabolic pathways: the example of yeast glycolysisJean-Marc Schwartz, Minoru Kanehisa. bmcbi, 7:186, 2006. [doi]

2005

Modelling liver tissue properties using a non-linear visco-elastic model for surgery simulationJean-Marc Schwartz, Marc Denninger, Denis Rancourt, Christian Moisan, Denis Laurendeau. mia, 9(2):103-112, 2005. [doi]

A quadratic programming approach for decomposing steady-state metabolic flux distributions onto elementary modesJean-Marc Schwartz, Minoru Kanehisa. eccb 2005: 205 [doi]

2004

Virtual Environment and Sensori-Motor Activities: Haptic, Auditory and Olfactory DevicesMarielle Mokhtari, François Bernier, François Lemieux, H. Martel, Jean-Marc Schwartz, Denis Laurendeau, Alexandra Branzan Albu. wscg 2004: 109-112

2003

Integrating Geometric and Biomechanical Models of a Liver Tumour for Cryosurgery SimulationAlexandra Branzan Albu, Jean-Marc Schwartz, Denis Laurendeau, Christian Moisan. is4th 2003: 121-131 [doi]

2001

Non-linear Soft Tissue Deformations for the Simulation of Percutaneous SurgeriesJean-Marc Schwartz, Ève Langelier, Christian Moisan, Denis Laurendeau. miccai 2001: 1271-1272 [doi]

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