Laura Elnitski - researchr alias

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2022

Characterization and clustering of kinase isoform expression in metastatic melanomaDavid O. Holland, Valer Gotea, Kevin Fedkenheuer, Sushil K. Jaiswal, Catherine Baugher, Hua Tan, Michael Fedkenheuer, Laura Elnitski. ploscb, 18(5), 2022. [doi]

2019

Aberrant DNA methylation defines isoform usage in cancer, with functional implicationsYun-Ching Chen, Laura Elnitski. ploscb, 15(7), 2019. [doi]

2018

Discovering Gene Regulatory Elements Using Coverage-Based HeuristicsRami Al-ouran, Robert Schmidt, Ashwini Naik, Jeffrey Jones, Frank Drews, David W. Juedes, Laura Elnitski, Lonnie R. Welch. tcbb, 15(4):1290-1300, 2018. [doi]

2017

Significant associations between driver gene mutations and DNA methylation alterations across many cancer typesYun-Ching Chen, Valer Gotea, Gennady Margolin, Laura Elnitski. ploscb, 13(11), 2017. [doi]

SigSeeker: a peak-calling ensemble approach for constructing epigenetic signaturesJens Lichtenberg, Laura Elnitski, David M. Bodine. bioinformatics, 33(17):2615-2621, 2017. [doi]

2014

Orthology-driven mapping of bidirectional promoters in human and mouse genomesMary Qu Yang, Laura Elnitski. bmcbi, 15(S-17), 2014. [doi]

2010

2008

Word-Based Characterization of the Bidirectional Promoters from the Human DNA-Repair PathwayJens Lichtenberg, Edwin Jacox, Mary Qu Yang, Laura Elnitski, Lonnie R. Welch. psb 2008: 29-33

Comparative analyses of bidirectional promoters in vertebratesMary Qu Yang, James Taylor, Laura Elnitski. bmcbi, 9(S-6), 2008. [doi]

2007

New Frontiers in Computational Genomics: Identification of Novel Functional Elements and Genome-scale Pattern AnalysisLaura Elnitski, Lonnie R. Welch. scpe, 8(3), 2007. [doi]

Promoter studies in the human genome: one perspective on an unfinished storyMary Qu Yang, Laura Elnitski. bibe 2007: 4-6 [doi]

Orthology and Multiple Class Prediction of Functional Elements in the Human GenomeMary Qu Yang, Laura Elnitski. psb 2007: 218-228

An Overview of Bidirectional PromotersMary Qu Yang, Laura Elnitski. bibe 2007: 1447 [doi]

Invited Talk: A Computational Study of Bidirectional Promoters in the Human GenomeMary Qu Yang, Laura Elnitski. isbra 2007: 361-371 [doi]

Comprehensive Annotation of Bidirectional Promoters Identifies Co-Regulation among Breast and Ovarian Cancer GenesMary Qu Yang, Laura M. Koehly, Laura Elnitski. ploscb, 3(4), 2007. [doi]

Rigorous Mapping of Orthologous Bidirectional Promoters in Vertebrates Defines their Evolutionary HistoryMary Qu Yang, James Taylor, Laura Elnitski. imsccs 2007: 115-122 [doi]

2006

Clustering of gene locationsEli Walters, Naomi S. Altman, Laura Elnitski. csda, 50(10):2920-2932, 2006. [doi]

2005

Improvements to GALA and dbERGE II: databases featuring genomic sequence alignment, annotation and experimental resultsLaura Elnitski, Belinda Giardine, Prachi Shah, Yi Zhang, Cathy Riemer, Matthew Weirauch, Richard Burhans, Webb Miller, Ross C. Hardison. nar, 33(Database-Issue):466-470, 2005. [doi]

2003

MultiPipMaker and supporting tools: alignments and analysis of multiple genomic DNA sequencesScott Schwartz, Laura Elnitski, Mei Li, Matthew Weirauch, Cathy Riemer, Arian Smit, Eric D. Green, Ross C. Hardison, Webb Miller. nar, 31(13):3518-3524, 2003.

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