Paul Kellam - researchr alias

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Viewing Publication 1 - 16 from 16

2017

Virus genomes reveal factors that spread and sustained the Ebola epidemicGytis Dudas, Luiz Max Carvalho, Trevor Bedford, Andrew J. Tatem, Guy Baele, Nuno R. Faria, Daniel J. Park, Jason T. Ladner, Armando Arias, Danny Asogun, Filip Bielejec, Sarah L. Caddy, Matthew Cotten, Jonathan D'Ambrozio, Simon Dellicour, Antonino Di Caro, Joseph W. Diclaro, Sophie Duraffour, Michael J. Elmore, Lawrence S. Fakoli, Ousmane Faye, Merle L. Gilbert, Sahr M. Gevao, Stephen Gire, Adrianne Gladden-Young, Andreas Gnirke, Augustine Goba, Donald S. Grant, Bart L. Haagmans, Julian A. Hiscox, Umaru Jah, Jeffrey R. Kugelman, Di Liu, Jia Lu, Christine M. Malboeuf, Suzanne Mate, David A. Matthews, Christian B. Matranga, Luke W. Meredith, James Qu, Joshua Quick, Suzan D. Pas, My V. T. Phan, Georgios Pollakis, Chantal B. Reusken, Mariano Sanchez-Lockhart, Stephen F. Schaffner, John S. Schieffelin, Rachel S. G. Sealfon, Etienne Simon-Loriere, Saskia L. Smits, Kilian Stoecker, Lucy Thorne, Ekaete Alice Tobin, Mohamed A. Vandi, Simon J. Watson, Kendra West, Shannon Whitmer, Michael R. Wiley, Sarah M. Winnicki, Shirlee Wohl, Roman Wölfel, Nathan L. Yozwiak, Kristian G. Andersen, Sylvia O. Blyden, Fatorma Bolay, Miles W. Carroll, Bernice Dahn, Boubacar Diallo, Pierre Formenty, Christophe Fraser, George F. Gao, Robert F. Garry, Ian Goodfellow, Stephan Günther, Christian T. Happi, Edward C. Holmes, Brima Kargbo, Sakoba Keïta, Paul Kellam, Marion Koopmans, Jens H. Kuhn, Nicholas J. Loman, N'Faly Magassouba, Dhamari Naidoo, Stuart T. Nichol, Tolbert Nyenswah, Gustavo F. Palacios, Oliver G. Pybus, Pardis C. Sabeti, Amadou Sall, Ute Ströher, Isatta Wurie, Marc A. Suchard, Philippe Lemey, Andrew Rambaut. nature, 544(7650):309-315, 2017. [doi]

2015

de novo assembly of RNA virus genomesMartin Hunt, Astrid Gall, Swee Hoe Ong, Jacqui Brener, Bridget Ferns, Philip J. R. Goulder, Eleni Nastouli, Jacqueline A. Keane, Paul Kellam, Thomas D. Otto. bioinformatics, 31(14):2374-2376, 2015. [doi]

2012

Analysis of high-depth sequence data for studying viral diversity: a comparison of next generation sequencing platforms using Segminator IIJohn Archer, Greg Baillie, Simon J. Watson, Paul Kellam, Andrew Rambaut, David L. Robertson. bmcbi, 13:47, 2012. [doi]

2008

Can graph-cutting improve microarray gene expression reconstructions?Karl Fraser, Zidong Wang, Yongmin Li, Paul Kellam, Xiaohui Liu. prl, 29(16):2129-2136, 2008. [doi]

Gene3D: comprehensive structural and functional annotation of genomesCorin Yeats, Jonathan Lees, Adam Reid, Paul Kellam, Nigel J. Martin, Xinhui Liu, Christine A. Orengo. nar, 36(Database-Issue):414-418, 2008. [doi]

2007

Noise Filtering and Microarray Image Reconstruction Via Chained FouriersKarl Fraser, Zidong Wang, Yongmin Li, Paul Kellam, Xiaohui Liu. ida 2007: 308-319 [doi]

2006

Improved Robustness in Time Series Analysis of Gene Expression Data by Polynomial Model Based ClusteringMichael Hirsch, Allan Tucker, Stephen Swift, Nigel J. Martin, Christine A. Orengo, Paul Kellam, Xiaohui Liu. complife 2006: 1-10 [doi]

Aggregating Homologous Protein Families in Evolutionary Reconstructions of HerpesvirusesBoris Mirkin, Renata da Silva Camargo, Trevor I. Fenner, George Loizou, Paul Kellam. cibcb 2006: 1-8 [doi]

2005

2004

Consensus Clustering and Functional Interpretation of Gene Expression DataPaul Kellam, Stephen Swift, Allan Tucker, Veronica Vinciotti, Nigel J. Martin, Christine A. Orengo, Xiaohui Liu. jbi 2004: 6

The Novel Virus Genotyping Tool (STAR) and its Use in Subtyping Human Immunodeficiency Virus Type-1 and Hepatitis B VirusesRichard Myers, Catherine V. Gale, Caroline Clark, Julie Bennett, Richard S. Tedder, Ian G. Williams, Paul Kellam. jbi 2004: 44

2002

A framework for modelling virus gene expression dataPaul Kellam, Xiaohui Liu, Nigel J. Martin, Christine A. Orengo, Stephen Swift, Allan Tucker. ida, 6(3):267-279, 2002. [doi]

PFDB: a generic protein family database integrating the CATH domain structure database with sequence based protein family resourcesAdrian J. Shepherd, Nigel J. Martin, Roger G. Johnson, Paul Kellam, Christine A. Orengo. bioinformatics, 18(12):1666-1672, 2002.

2001

VIDA: a virus database system for the organization of animal virus genome open reading framesM. Mar Albà, David Lee, Frances M. G. Pearl, Adrian J. Shepherd, Nigel J. Martin, Christine A. Orengo, Paul Kellam. nar, 29(1):133-136, 2001.

A Framework for Modelling Short, High-Dimensional Multivariate Time Series: Preliminary Results in Virus Gene Expression Data AnalysisPaul Kellam, Xiaohui Liu, Nigel J. Martin, Christine A. Orengo, Stephen Swift, Allan Tucker. ida 2001: 218-227 [doi]

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