| 2473 | -- | 2477 | Adrian Schröder, Johannes Wollnik, Clemens Wrzodek, Andreas Dräger, Michael Bonin, Oliver Burk, Maria Thomas, Wolfgang E. Thasler, Ulrich M. Zanger, Andreas Zell. Inferring statin-induced gene regulatory relationships in primary human hepatocytes |
| 2478 | -- | 2485 | Luciana Ferrer, Alexander Glennon Shearer, Peter D. Karp. Discovering novel subsystems using comparative genomics |
| 2486 | -- | 2493 | Donglai Wei, Lauren V. Alpert, Charles E. Lawrence. RNAG: a new Gibbs sampler for predicting RNA secondary structure for unaligned sequences |
| 2494 | -- | 2501 | Dong Seon Kim, Yoonsoo Hahn. Identification of novel phosphorylation modification sites in human proteins that originated after the human-chimpanzee divergence |
| 2502 | -- | 2509 | Ergude Bao, Tao Jiang, Isgouhi Kaloshian, Thomas Girke. SEED: efficient clustering of next-generation sequences |
| 2510 | -- | 2517 | Matej Lexa, Tomás Martínek, Ivana Burgetova, Daniel Kopecek, Marie Brázdová. A dynamic programming algorithm for identification of triplex-forming sequences |
| 2518 | -- | 2528 | Gregory R. Grant, Michael H. Farkas, Angel D. Pizarro, Nicholas F. Lahens, Jonathan Schug, Brian P. Brunk, Christian J. Stoeckert Jr., John B. Hogenesch, Eric A. Pierce. Comparative analysis of RNA-Seq alignment algorithms and the RNA-Seq unified mapper (RUM) |
| 2529 | -- | 2536 | Qian Liu, Steven C. H. Hoi, Chinh T. T. Su, Zhenhua Li, Chee Keong Kwoh, Limsoon Wong, Jinyan Li. Structural analysis of the hot spots in the binding between H1N1 HA and the 2D1 antibody: do mutations of H1N1 from 1918 to 2009 affect much on this binding? |
| 2537 | -- | 2545 | Sheng Wang, Jian Peng 0001, Jinbo Xu. Alignment of distantly related protein structures: algorithm, bound and implications to homology modeling |
| 2546 | -- | 2553 | Lan Zagar, Francesca Mulas, Silvia Garagna, Maurizio Zuccotti, Riccardo Bellazzi, Blaz Zupan. Stage prediction of embryonic stem cell differentiation from genome-wide expression data |
| 2554 | -- | 2562 | Hui Yuan Xiong, Yoseph Barash, Brendan J. Frey. Bayesian prediction of tissue-regulated splicing using RNA sequence and cellular context |
| 2563 | -- | 2570 | Inka J. Appel, Wolfram Gronwald, Rainer Spang. Estimating classification probabilities in high-dimensional diagnostic studies |
| 2571 | -- | 2577 | Fan Xia, Ji-Yuan Zhou, Wing Kam Fung. A powerful approach for association analysis incorporating imprinting effects |
| 2578 | -- | 2585 | Can Yang, Xiaowei Zhou, Xiang Wan, Qiang Yang, Hong Xue, Weichuan Yu. Identifying disease-associated SNP clusters via contiguous outlier detection |
| 2586 | -- | 2594 | Hong-Jie Dai, Yen-Ching Chang, Richard Tzong-Han Tsai, Wen-Lian Hsu. Integration of gene normalization stages and co-reference resolution using a Markov logic network |
| 2595 | -- | 2597 | Igor Lukashin, Pavel S. Novichkov, Dario Boffelli, Alex R. Paciorkowski, Simon Minovitsky, Song Yang, Inna Dubchak. VISTA Region Viewer (RViewer) - a computational system for prioritizing genomic intervals for biomedical studies |
| 2598 | -- | 2600 | Ying Wang, Gaurang Mehta, Rajiv Mayani, Jingxi Lu, Tade Souaiaia, Yangho Chen, Andrew P. Clark, Hee Jae Yoon, Lin Wan, Oleg V. Evgrafov, James A. Knowles, Ewa Deelman, Ting Chen. RseqFlow: workflows for RNA-Seq data analysis |
| 2601 | -- | 2602 | Kristian Cibulskis, Aaron McKenna, Tim Fennell, Eric Banks, Mark A. DePristo, Gad Getz. ContEst: estimating cross-contamination of human samples in next-generation sequencing data |
| 2603 | -- | 2604 | Marc J. Lajeunesse. phyloMeta: a program for phylogenetic comparative analyses with meta-analysis |
| 2605 | -- | 2606 | David Fournier, Miguel A. Andrade-Navarro. PDBpaint, a visualization webservice to tag protein structures with sequence annotations |
| 2607 | -- | 2609 | Li Chen, Tsung-Han Chan, Peter L. Choyke, Elizabeth M. C. Hillman, Chong-Yung Chi, Zaver M. Bhujwalla, Ge Wang, Sean S. Wang, Zsolt Szabo, Yue Joseph Wang. in vivo dynamic contrast-enhanced imaging of complex tissues |
| 2610 | -- | 2611 | Oana Chis, Julio R. Banga, Eva Balsa-Canto. GenSSI: a software toolbox for structural identifiability analysis of biological models |
| 2612 | -- | 2613 | Florian Battke, Stephan Symons, Alexander Herbig, Kay Nieselt. GaggleBridge: collaborative data analysis |
| 2614 | -- | 2615 | Xiaozeng Yang, Lei Li. miRDeep-P: a computational tool for analyzing the microRNA transcriptome in plants |
| 2616 | -- | 2617 | Jose M. Villaveces, Rafael C. Jimenez, Leyla J. Garcia, Gustavo A. Salazar, Bernat Gel, Nicola J. Mulder, Maria Jesus Martin, Alexander García Castro, Henning Hermjakob. Dasty3, a WEB framework for DAS |
| 2618 | -- | 2619 | Jacek Sroka, Lukasz Krupa, Andrzej M. Kierzek, Jerzy Tyszkiewicz. Taverna workbench |