| 889 | -- | 896 | Hyunju Lee, Sek Won Kong, Peter J. Park. Integrative analysis reveals the direct and indirect interactions between DNA copy number aberrations and gene expression changes |
| 897 | -- | 900 | Ketil Malde. The effect of sequence quality on sequence alignment |
| 901 | -- | 907 | Ian M. Overton, Gianandrea Padovani, Mark A. Girolami, Geoffrey J. Barton. ParCrys: a Parzen window density estimation approach to protein crystallization propensity prediction |
| 908 | -- | 915 | Kai Ye, Gert Vriend, Adriaan P. IJzerman. Tracing evolutionary pressure |
| 916 | -- | 923 | Michael Stout, Jaume Bacardit, Jonathan D. Hirst, Natalio Krasnogor. Prediction of recursive convex hull class assignments for protein residues |
| 924 | -- | 931 | Sitao Wu, Yang Zhang. A comprehensive assessment of sequence-based and template-based methods for protein contact prediction |
| 932 | -- | 942 | Osamu Hirose, Ryo Yoshida, Seiya Imoto, Rui Yamaguchi, Tomoyuki Higuchi, Stephen D. Charnock-Jones, Cristin G. Print, Satoru Miyano. Statistical inference of transcriptional module-based gene networks from time course gene expression profiles by using state space models |
| 943 | -- | 949 | Yuan Ji, Yiling Lu, Gordon B. Mills. Bayesian models based on test statistics for multiple hypothesis testing problems |
| 950 | -- | 957 | Andrew W. Dowsey, Michael J. Dunn, Guang-Zhong Yang. Automated image alignment for 2D gel electrophoresis in a high-throughput proteomics pipeline |
| 958 | -- | 964 | Joshua N. Sampson, Steven G. Self. Identifying trait clusters by linkage profiles: application in genetical genomics |
| 965 | -- | 971 | Yu Zhang. Tree-guided Bayesian inference of population structures |
| 972 | -- | 978 | Shu-Yi Su, David J. Balding, Lachlan J. M. Coin. Disease association tests by inferring ancestral haplotypes using a hidden markov model |
| 979 | -- | 986 | Bing Zhang, Byung-Hoon Park, Tatiana V. Karpinets, Nagiza F. Samatova. From pull-down data to protein interaction networks and complexes with biological relevance |
| 987 | -- | 994 | Yung-Keun Kwon, Kwang-Hyun Cho. Quantitative analysis of robustness and fragility in biological networks based on feedback dynamics |
| 995 | -- | 1001 | Juby Jacob, Marcel Jentsch, Dennis Kostka, Stefan Bentink, Rainer Spang. Detecting hierarchical structure in molecular characteristics of disease using transitive approximations of directed graphs |
| 1002 | -- | 1010 | Norio Kobayashi, Tetsuro Toyoda. Statistical search on the Semantic Web |
| 1011 | -- | 1013 | Qing Xiong, Yuhui Qiu, Weikuan Gu. PGMapper: a web-based tool linking phenotype to genes |
| 1014 | -- | 1015 | Weil R. Lai, Vidhu Choudhary, Peter J. Park. CGHweb: a tool for comparing DNA copy number segmentations from multiple algorithms |
| 1016 | -- | 1017 | David He, John Parkinson. SubSeqer: a graph-based approach for the detection and identification of repetitive elements in low-complexity sequences |
| 1018 | -- | 1020 | Liam J. Revell, Alexis S. Harrison. PCCA: a program for phylogenetic canonical correlation analysis |
| 1021 | -- | 1023 | Anoop M. Mayampurath, Navdeep Jaitly, Samuel O. Purvine, Matthew E. Monroe, Kenneth J. Auberry, Joshua N. Adkins, Richard D. Smith. DeconMSn: a software tool for accurate parent ion monoisotopic mass determination for tandem mass spectra |
| 1024 | -- | 1025 | Jongsun Park, Jaejin Park, Suwang Jang, Seryun Kim, Sunghyung Kong, Jaeyoung Choi, Kyohun Ahn, Juhyeon Kim, Seungmin Lee, Sunggon Kim, Bongsoo Park, Kyongyong Jung, Soonok Kim, Seogchan Kang, Yong-Hwan Lee. FTFD: an informatics pipeline supporting phylogenomic analysis of fungal transcription factors |
| 1026 | -- | 1028 | Bongshin Lee, Kristy Brown, Yetrib Hathout, Jinwook Seo. GOTreePlus: an interactive gene ontology browser |
| 1029 | -- | 1032 | Radhakrishnan Nagarajan, Meenakshi Upreti. Comment on causality and pathway search in microarray time series experiment |
| 1033 | -- | 0 | Nitai D. Mukhopadhyay, Snigdhansu Chatterjee. Reply to Comment on causality and pathway search in microarray time series experiment |