researchr

explore
calendar
search

You are not signed in
Sign in
Sign up

All Publications

Unidentified publications

Filter by Year

Filter by Type

Filter by Topic

Filter by Venue

Filter by Co-author

Filter by Top terms

Download

BibTeX
Compact BibTeX
RSS
HTML
YAML
Compact YAML

External Links

Homepage

Profile Name

douglasbkell

Statistics

Publications: 1
Edited: 0

Aliases

Kell, Douglas B.
D. B. Kell
Douglas B. Kell
Kell, D. B.
Kell

Researchr

Researchr is a web site for finding, collecting, sharing, and reviewing scientific publications, for researchers by researchers.

Sign up for an account to create a profile with publication list, tag and review your related work, and share bibliographies with your co-authors.

Douglas B. Kell's Profile

Publications

Unidentified Publications

Publications with a 'Douglas B. Kell' as author, editor, or advisor:

Path2Models: large-scale generation of computational models from biochemical pathway mapsFinja Büchel, Nicolas Rodriguez, Neil Swainston, Clemens Wrzodek, Tobias Czauderna, Roland Keller, Florian Mittag, Michael Schubert, Mihai Glont, Martin Golebiewski, Martijn P. van Iersel, Sarah M. Keating, Matthias Rall, Michael Wybrow, Henning Hermjakob, Michael Hucka, Douglas B. Kell, Wolfgang Müller 0001, Pedro Mendes, Andreas Zell, Claudine Chaouiya, Julio Saez-Rodriguez, Falk Schreiber, Camille Laibe, Andreas Dräger, Nicolas Le Novère. bmcsb, 7:116, 2013. [doi]
Automated workflows for accurate mass-based putative metabolite identification in LC/MS-derived metabolomic datasetsMarie Brown, David C. Wedge, Royston Goodacre, Douglas B. Kell, Philip N. Baker, Louise C. Kenny, Mamas A. Mamas, Ludwig Neyses, Warwick B. Dunn. bioinformatics, 27(8):1108-1112, 2011. [doi]
myGrid: Aligning a Workflow System with the Life Sciences CommunityTom Oinn, Peter Li, Douglas B. Kell, Carole A. Goble, Antoon Goderis, R. Mark Greenwood, Duncan Hull, Robert Stevens 0001, Daniele Turi, Jun Zhao 0003. In Ian J. Taylor, Ewa Deelman, Dennis B. Gannon, Matthew S. Shields, editors, Workflows for e-Science, Scientific Workflows for Grids. pages 300-319, Springer, 2007. [doi]
Deterministic mathematical models of the cAMP pathway in Saccharomyces cerevisiaeThomas Williamson, Jean-Marc Schwartz, Douglas B. Kell, Lubomira Stateva. bmcsb, 3:70, 2009. [doi]
Molecular Structure Elucidation Using Ant Colony Optimization: A Preliminary StudyCaroline Farrelly, Douglas B. Kell, Joshua D. Knowles. antsw 2008: 120-131 [doi]
GeneGenie: optimized oligomer design for directed evolutionNeil Swainston, Andrew Currin, Philip J. Day, Douglas B. Kell. nar, 42(Webserver-Issue):395-400, 2014. [doi]
Multiobjective Optimization in Bioinformatics and Computational BiologyJulia Handl, Douglas B. Kell, Joshua D. Knowles. tcbb, 4(2):279-292, 2007. [doi]
Observed dynamics of Large Scale Parallel Evolutionary Algorithms with Implications for protein EngineeringMartin J. Oates, David Corne, Douglas B. Kell. seal 2004: 208-229 [doi]
Towards a mathematical model of the cAMP pathway in S. cerevisiaeThomas Williamson, Frank Bruggemann, Douglas B. Kell, Lubomira Stateva. bmcsb, 1(S-1), 2007. [doi]
Systematic integration of experimental data and models in systems biologyPeter Li, Joseph O. Dada, Daniel Jameson, Irena Spasic, Neil Swainston, Kathleen Carroll, Warwick B. Dunn, Farid Khan, Naglis Malys, Hanan L. Messiha, Evangelos Simeonidis, Dieter Weichart, Catherine Winder, Jill Wishart, David S. Broomhead, Carole A. Goble, Simon J. Gaskell, Douglas B. Kell, Hans V. Westerhoff, Pedro Mendes, Norman W. Paton. bmcbi, 11:582, 2010. [doi]
Predictive models for population performance on real biological fitness landscapesWilliam Rowe, David C. Wedge, Mark Platt, Douglas B. Kell, Joshua D. Knowles. bioinformatics, 26(17):2145-2152, 2010. [doi]
PartsGenie: an integrated tool for optimizing and sharing synthetic biology partsNeil Swainston, Mark Dunstan, Adrian J. Jervis, Christopher J. Robinson, Pablo Carbonell, Alan R. Williams, Jean-Loup Faulon, Nigel S. Scrutton, Douglas B. Kell. bioinformatics, 34(13):2327-2329, 2018. [doi]
Automated workflows for accurate mass-based putative metabolite identification in LC/MS-derived metabolomic datasetsMarie Brown, David C. Wedge, Royston Goodacre, Douglas B. Kell, Philip N. Baker, Louise C. Kenny, Mamas A. Mamas, Ludwig Neyses, Warwick B. Dunn. bioinformatics, 28(1):149, 2012. [doi]
Computational cluster validation in post-genomic data analysisJulia Handl, Joshua D. Knowles, Douglas B. Kell. bioinformatics, 21(15):3201-3212, 2005. [doi]
Defrosting the Digital Library: Bibliographic Tools for the Next Generation WebDuncan Hull, Steve Pettifer, Douglas B. Kell. ploscb, 4(10), 2008. [doi]
Visualising biological data: a semantic approach to tool and database integrationSteve Pettifer, David Thorne, Philip McDermott, James Marsh, Alice VillÃ©ger, Douglas B. Kell, Teresa K. Attwood. bmcbi, 10(S-6), 2009. [doi]
Analysis of drug-endogenous human metabolite similarities in terms of their maximum common substructuresSteve O'Hagan, Douglas B. Kell. jcheminf, 9(1), 2017. [doi]
Improving Data Fitting of a Signal Transduction Model by Global Sensitivity AnalysisYisu Jin, Hong Yue, Martin Brown, Yizeng Liang, Douglas B. Kell. amcc 2007: 2708-2713 [doi]
KiPar, a tool for systematic information retrieval regarding parameters for kinetic modelling of yeast metabolic pathwaysIrena Spasic, Evangelos Simeonidis, Hanan L. Messiha, Norman W. Paton, Douglas B. Kell. bioinformatics, 25(11):1404-1411, 2009. [doi]
The genetic control of growth rate: a systems biology study in yeastPinar Pir, Alex Gutteridge, Jian Wu, Bharat Rash, Douglas B. Kell, Nianshu Zhang, Stephen G. Oliver. bmcsb, 6:4, 2012. [doi]
DeepGraphMolGen, a multi-objective, computational strategy for generating molecules with desirable properties: a graph convolution and reinforcement learning approachYash Khemchandani, Stephen O'Hagan, Soumitra Samanta, Neil Swainston, Timothy J. Roberts, Danushka Bollegala, Douglas B. Kell. jcheminf, 12(1):53, 2020. [doi]
MeMo: a hybrid SQL/XML approach to metabolomic data management for functional genomicsIrena Spasic, Warwick B. Dunn, Giles Velarde, Andy Tseng, Helen Jenkins, Nigel Hardy, Stephen G. Oliver, Douglas B. Kell. bmcbi, 7:281, 2006. [doi]
Rapid prediction of optimum population size in genetic programming using a novel genotype -: fitness correlationDavid C. Wedge, Douglas B. Kell. gecco 2008: 1315-1322 [doi]
The SuBliMinaL Toolbox: automating steps in the reconstruction of metabolic networksNeil Swainston, Kieran Smallbone, Pedro Mendes, Douglas B. Kell, Norman W. Paton. jib, 8(2), 2011. [doi]
A method for integrating and ranking the evidence for biochemical pathways by mining reactions from textMakoto Miwa, Tomoko Ohta, Rafal Rak, Andrew Rowley, Douglas B. Kell, Sampo Pyysalo, Sophia Ananiadou. bioinformatics, 29(13):44-52, 2013. [doi]
Genomic computing: explanatory modelling for functional genomicsRichard J. Gilbert, Jem J. Rowland, Douglas B. Kell. gecco 2000: 551-557
Interactions among oscillatory pathways in NF-kappa B signalingYunjiao Wang, Pawel Paszek, Caroline A. Horton, Douglas B. Kell, Michael R. H. White, David S. Broomhead, Mark R. Muldoon. bmcsb, 5:23, 2011. [doi]
Compression of proteome gel images using complex wavelet transformWei Liu, Andy Woodward, Douglas B. Kell. gcb 2001: 207
Bayesian inference of the sites of perturbations in metabolic pathways via Markov chain Monte CarloBayu Jayawardhana, Douglas B. Kell, Magnus Rattray. bioinformatics, 24(9):1191-1197, 2008. [doi]
Landscape State Machines: Tools for Evolutionary Algorithm Performance Analyses and Landscape/Algorithm MappingDavid Corne, Martin J. Oates, Douglas B. Kell. evoW 2003: 187-198 [doi]
On Fitness Distributions and Expected Fitness Gain of Mutation Rates in Parallel Evolutionary AlgorithmsDavid Corne, Martin J. Oates, Douglas B. Kell. ppsn 2002: 132-141 [doi]
Fitness Gains and Mutation Patterns: Deriving Mutation Rates by Exploiting Landscape DataDavid W. Corne, Martin J. Oates, Douglas B. Kell. foga 2003: 347-364
maxdLoad2 and maxdBrowse: standards-compliant tools for microarray experimental annotation, data management and disseminationDavid Hancock, Michael Wilson, Giles Velarde, Norman Morrison, Andrew Hayes, Helen Hulme, A. Joseph Wood, Karim Nashar, Douglas B. Kell, Andy Brass. bmcbi, 6:264, 2005. [doi]
Facilitating the development of controlled vocabularies for metabolomics technologies with text miningIrena Spasic, Daniel Schober, Susanna-Assunta Sansone, Dietrich Rebholz-Schuhmann, Douglas B. Kell, Norman W. Paton. bmcbi, 9(S-5), 2008. [doi]
Selenzyme: enzyme selection tool for pathway designPablo Carbonell, Jerry Wong, Neil Swainston, Eriko Takano, Nicholas J. Turner, Nigel S. Scrutton, Douglas B. Kell, Rainer Breitling, Jean-Loup Faulon. bioinformatics, 34(12):2153-2154, 2018. [doi]
CodonGenie: optimised ambiguous codon design toolsNeil Swainston, Andrew Currin, Lucy Green, Rainer Breitling, Philip J. Day, Douglas B. Kell. peerj-cs, 3, 2017. [doi]
Non-linear optimization of biochemical pathways: applications to metabolic engineering and parameter estimationPedro Mendes, Douglas B. Kell. bioinformatics, 14(10):869-883, 1998.
Spectral analysis via supervised genetic search with application-specific mutationsJanet Taylor, Jem J. Rowland, Douglas B. Kell. cec 2001: 481-486 [doi]
Arcadia: a visualization tool for metabolic pathwaysAlice Villéger, Stephen Pettifer, Douglas B. Kell. bioinformatics, 26(11):1470-1471, 2010. [doi]
Evolutionary algorithms and synthetic biology for directed evolution: commentary on "on the mapping of genotype to phenotype in evolutionary algorithms" by Peter A. Whigham, Grant Dick, and James MaclaurinDouglas B. Kell. gpem, 18(3):373-378, 2017. [doi]
Explanatory Analysis of the Metabolome Using Genetic Programming of Simple, Interpretable RulesHelen E. Johnson, Richard J. Gilbert, Michael K. Winson, Royston Goodacre, Aileen R. Smith, Jem J. Rowland, Michael A. Hall, Douglas B. Kell. gpem, 1(3):243-258, 2000.
Peptide detectability following ESI mass spectrometry: prediction using genetic programmingDavid C. Wedge, Simon J. Gaskell, Simon J. Hubbard, Douglas B. Kell, King Wai Lau, Claire Eyers. gecco 2007: 2219-2225 [doi]
Predicting the points of interaction of small molecules in the NF-κB pathwayYogendra Patel, Catherine A. Heyward, Michael R. H. White, Douglas B. Kell. bmcsb, 5:32, 2011. [doi]
MEG (Model Extender for Gepasi): a program for the modelling of complex, heterogeneous, cellular systemsPedro Mendes, Douglas B. Kell. bioinformatics, 17(3):288-289, 2001.
Information management for high content live cell imagingDaniel Jameson, David A. Turner, John Ankers, Stephnie Kennedy, Sheila Ryan, Neil Swainston, Tony Griffiths, David G. Spiller, Stephen G. Oliver, Michael R. H. White, Douglas B. Kell, Norman W. Paton. bmcbi, 10, 2009. [doi]
Performing statistical analyses on quantitative data in Taverna workflows: An example using R and maxdBrowse to identify differentially-expressed genes from microarray dataPeter Li, Juan I. Castrillo, Giles Velarde, Ingo Wassink, Stian Soiland-Reyes, Stuart Owen, David Withers, Tom Oinn, Matthew R. Pocock, Carole A. Goble, Stephen G. Oliver, Douglas B. Kell. bmcbi, 9, 2008. [doi]
CodonGenie: optimised ambiguous codon design toolsNeil Swainston, Andrew Currin, Lucy Green, Rainer Breitling, Philip J. Day, Douglas B. Kell. peerjpre, 5, 2017. [doi]
Utopia documents: linking scholarly literature with research dataTerri K. Attwood, Douglas B. Kell, Philip McDermott, James Marsh, Stephen Pettifer, David Thorne. bioinformatics, 26(18), 2010. [doi]
Further developments towards a genome-scale metabolic model of yeastPaul D. Dobson, Kieran Smallbone, Daniel Jameson, Evangelos Simeonidis, Karin Lanthaler, Pinar Pir, Chuan Lu, Neil Swainston, Warwick B. Dunn, Paul Fisher, Duncan Hull, Marie Brown, Olusegun Oshota, Natalie J. Stanford, Douglas B. Kell, Ross D. King, Stephen G. Oliver, Robert D. Stevens, Pedro Mendes. bmcsb, 4:145, 2010. [doi]
The landscape adaptive particle swarm optimizerJin Yisu, Joshua D. Knowles, Hongmei Lu, Yizeng Liang, Douglas B. Kell. asc, 8(1):295-304, 2008. [doi]
Software review: the KNIME workflow environment and its applications in genetic programming and machine learningSteve O'Hagan, Douglas B. Kell. gpem, 16(3):387-391, 2015. [doi]
Combining Inductive Logic Programming, Active Learning and Robotics to Discover the Function of GenesChristopher H. Bryant, Stephen Muggleton, Stephen G. Oliver, Douglas B. Kell, Philip G. K. Reiser, Ross D. King. etai, 5(B):1-36, 2001. [doi]
Automated manipulation of systems biology models using libSBML within Taverna workflowsPeter Li, Tom Oinn, Stian Soiland, Douglas B. Kell. bioinformatics, 24(2):287-289, 2008. [doi]
Extracting semantically enriched events from biomedical literatureMakoto Miwa, Paul Thompson, John McNaught, Douglas B. Kell, Sophia Ananiadou. bmcbi, 13:108, 2012. [doi]
Developing a Logical Model of Yeast MetabolismPhilip G. K. Reiser, Ross D. King, Douglas B. Kell, Stephen Muggleton, Christopher H. Bryant, Stephen G. Oliver. etai, 5(B):223-244, 2001. [doi]
Improving metabolic flux predictions using absolute gene expression dataDave Lee, Kieran Smallbone, Warwick B. Dunn, Ettore Murabito, Catherine Winder, Douglas B. Kell, Pedro Mendes, Neil Swainston. bmcsb, 6:73, 2012. [doi]

About
Contact
Credits
Help
Web Service API
Blog
FAQ
Feedback

runs on WebDSL