| 3291 | -- | 3292 | Krzysztof Ginalski, Leszek Rychlewski. Detection of reliable and unexpected protein fold predictions using 3D-Jury |
| 3293 | -- | 3295 | Phil Carter, Claus A. F. Andersen, Burkhard Rost. DSSPcont: continuous secondary structure assignments for proteins |
| 3296 | -- | 3299 | Ling-Hong Hung, Ram Samudrala. PROTINFO: secondary and tertiary protein structure prediction |
| 3300 | -- | 3304 | Burkhard Rost, Jinfeng Liu. The PredictProtein server |
| 3305 | -- | 3307 | Michal A. Kurowski, Janusz M. Bujnicki. GeneSilico protein structure prediction meta-server |
| 3308 | -- | 3310 | Volker A. Eyrich, Burkhard Rost. META-PP: single interface to crucial prediction servers |
| 3311 | -- | 3315 | Ingrid Y. Y. Koh, Volker A. Eyrich, Marc A. Martí-Renom, Dariusz Przybylski, Mallur S. Madhusudhan, Narayanan Eswar, Osvaldo Graña, Florencio Pazos, Alfonso Valencia, Andrej Sali, Burkhard Rost. EVA: evaluation of protein structure prediction servers |
| 3316 | -- | 3319 | Leigh Willard, Anuj Ranjan, Haiyan Zhang, Hassan Monzavi, Robert F. Boyko, Brian D. Sykes, David S. Wishart. VADAR: a web server for quantitative evaluation of protein structure quality |
| 3320 | -- | 3323 | Patrice Gouet, Xavier Robert, Emmanuel Courcelle. ESPript/ENDscript: extracting and rendering sequence and 3D information from atomic structures of proteins |
| 3324 | -- | 3327 | Mike P. Liang, D. Rey Banatao, Teri E. Klein, Douglas L. Brutlag, Russ B. Altman. WebFEATURE: an interactive web tool for identifying and visualizing functional sites on macromolecular structures |
| 3328 | -- | 3332 | Steven P. Bennett, Lin Lu, Douglas L. Brutlag. 3MATRIX and 3MOTIF: a protein structure visualization system for conserved sequence motifs |
| 3333 | -- | 3336 | Anna Gaulton, Terri K. Attwood. Motif3D: relating protein sequence motifs to 3D structure |
| 3337 | -- | 3340 | Rajesh Nair, Burkhard Rost. LOC3D: annotate sub-cellular localization for protein structures |
| 3341 | -- | 3344 | Alexander Stark, Robert B. Russell. Annotation in three dimensions. PINTS: Patterns in Non-homologous Tertiary Structures |
| 3345 | -- | 3348 | M. Madan Babu. NCI: a server to identify non-canonical interactions in protein structures |
| 3349 | -- | 3351 | Razif R. Gabdoulline, Rebecca C. Wade, Dirk Walther. MolSurfer: a macromolecular interface navigator |
| 3352 | -- | 3355 | T. Andrew Binkowski, Shapor Naghibzadeh, Jie Liang. CASTp: Computed Atlas of Surface Topography of proteins |
| 3356 | -- | 3358 | A. S. Z. Hussain, Ch. Kiran Kumar, C. K. Rajesh, S. S. Sheik, Krishna Sekar. SEM (Symmetry Equivalent Molecules): a web-based GUI to generate and visualize the macromolecules |
| 3359 | -- | 3363 | Zsuzsanna Dosztányi, Csaba Magyar, Gábor E. Tusnády, Miklós Cserzo, András Fiser, István Simon. Servers for sequence-structure relationship analysis and prediction |
| 3364 | -- | 3366 | Luigi Cavallo, Jens Kleinjung, Franca Fraternali. POPS: a fast algorithm for solvent accessible surface areas at atomic and residue level |
| 3367 | -- | 3369 | Takeshi Kawabata. MATRAS: a program for protein 3D structure comparison |
| 3370 | -- | 3374 | Adam Zemla. LGA: a method for finding 3D similarities in protein structures |
| 3375 | -- | 3380 | Narayanan Eswar, Bino John, Nebojsa Mirkovic, András Fiser, Valentin A. Ilyin, Ursula Pieper, Ashley C. Stuart, Marc A. Martí-Renom, Mallur S. Madhusudhan, Bozidar Yerkovich, Andrej Sali. Tools for comparative protein structure modeling and analysis |
| 3381 | -- | 3385 | . SWISS-MODEL: an automated protein homology-modeling server |
| 3386 | -- | 3392 | Goran Neshich, Roberto C. Togawa, Adauto L. Mancini, Paula R. Kuser, Michel E. B. Yamagishi, Georgios Joannis Pappas Jr., Wellington V. Torres, Tharsis Fonseca e Campos, Leonardo L. Ferreira, Fabio M. Luna, Adilton G. Oliveira, Ronald T. Miura, Marcus K. Inoue, Luiz G. Horita, Dimas F. de Souza, Fabiana Dominiquini, Alexandre Alvaro, Cleber S. Lima, Fabio O. Ogawa, Gabriel B. Gomes, Juliana F. Palandrani, Gabriela F. dos Santos, Esther M. de Freitas, Amanda R. Mattiuz, Ivan C. Costa, Celso L. de Almeida, Savio Souza, Christian Baudet, Roberto H. Higa. STING Millennium: a web-based suite of programs for comprehensive and simultaneous analysis of protein structure and sequence |
| 3393 | -- | 3399 | Guy Perrière, Christophe Combet, Simon Penel, Christophe Blanchet, Jean Thioulouse, Christophe Geourjon, Julien Grassot, Céline Charavay, Manolo Gouy, Laurent Duret, Gilbert Deléage. Integrated databanks access and sequence/structure analysis services at the PBIL |
| 3400 | -- | 3403 | Emmanuel Bettler, Roland Krause, Florence Horn, Gert Vriend. NRSAS: Nuclear Receptor Structure Analysis Servers |
| 3404 | -- | 3405 | V. Shanthi, P. Selvarani, Ch. Kiran Kumar, C. S. Mohire, Krishna Sekar. SSEP: secondary structural elements of proteins |
| 3406 | -- | 3415 | Michael Zuker. Mfold web server for nucleic acid folding and hybridization prediction |
| 3416 | -- | 3422 | Mirela Andronescu, Rosalía Aguirre-Hernández, Anne Condon, Holger H. Hoos. RNAsoft: a suite of RNA secondary structure prediction and design software tools |
| 3423 | -- | 3428 | Bjarne Knudsen, Jotun Hein. Pfold: RNA secondary structure prediction using stochastic context-free grammars |
| 3429 | -- | 3431 | Ivo L. Hofacker. Vienna RNA secondary structure server |
| 3432 | -- | 3440 | Kyungsook Han, Yanga Byun. PSEUDOVIEWER2: visualization of RNA pseudoknots of any type |
| 3441 | -- | 3445 | Peter Bengert, Thomas Dandekar. A software tool-box for analysis of regulatory RNA elements |
| 3446 | -- | 3449 | Yuh-Jyh Hu. GPRM: a genetic programming approach to finding common RNA secondary structure elements |
| 3450 | -- | 3460 | Huanwang Yang, Fabrice Jossinet, Neocles Leontis, Li Chen, John D. Westbrook, Helen M. Berman, Eric Westhof. Tools for the automatic identification and classification of RNA base pairs |
| 3461 | -- | 3467 | Javier Herrero, Fátima Al-Shahrour, Ramón Díaz-Uriarte, Álvaro Mateos, Juan M. Vaquerizas, Javier Santoyo, Joaquín Dopazo. GEPAS: a web-based resource for microarray gene expression data analysis |
| 3468 | -- | 3470 | Bert Coessens, Gert Thijs, Stein Aerts, Kathleen Marchal, Frank De Smet, Kristof Engelen, Patrick Glenisson, Yves Moreau, Janick Mathys, Bart De Moor. INCLUSive: a web portal and service registry for microarray and regulatory sequence analysis |
| 3471 | -- | 3476 | Steen Knudsen, Christopher T. Workman, Thomas Sicheritz-Ponten, Carsten Friis. GenePublisher: automated analysis of DNA microarray data |
| 3477 | -- | 3482 | Nicholas M. Luscombe, Thomas E. Royce, Paul Bertone, Nathaniel Echols, Christine E. Horak, Joseph T. Chang, Michael Snyder, Mark Gerstein. ExpressYourself: a modular platform for processing and visualizing microarray data |
| 3483 | -- | 3486 | Sheng Zhong, Cheng Li, Wing Hung Wong. ChipInfo: software for extracting gene annotation and gene ontology information for microarray analysis |
| 3487 | -- | 3490 | Crispin Roven, Harmen J. Bussemaker. REDUCE: an online tool for inferring cis-regulatory elements and transcriptional module activities from microarray data |
| 3491 | -- | 3496 | Henrik Bjørn Nielsen, Rasmus Wernersson, Steen Knudsen. Design of oligonucleotides for microarrays and perspectives for design of multi-transcriptome arrays |
| 3497 | -- | 3500 | Chenna Ramu, Hideaki Sugawara, Tadashi Koike, Rodrigo Lopez, Toby J. Gibson, Desmond G. Higgins, Julie Dawn Thompson. Multiple sequence alignment with the Clustal series of programs |
| 3501 | -- | 3502 | Davinder K. Kohli, Anand K. Bachhawat. CLOURE: Clustal Output Reformatter, a program for reformatting ClustalX/ClustalW outputs for SNP analysis and molecular systematics |
| 3503 | -- | 3506 | Olivier Poirot, Eamonn O Toole, Cédric Notredame. Tcoffee add igs: a web server for computing, evaluating and combining multiple sequence alignments |
| 3507 | -- | 3509 | Simon Cawley, Lior Pachter, Marina Alexandersson. SLAM web server for comparative gene finding and alignment |
| 3510 | -- | 3517 | Yvonne J. K. Edwards, Tim J. Carver, Tanya Vavouri, Martin C. Frith, Martin J. Bishop, Greg Elgar. Theatre: a software tool for detailed comparative analysis and visualization of genomic sequence |
| 3518 | -- | 3524 | Scott Schwartz, Laura Elnitski, Mei Li, Matthew Weirauch, Cathy Riemer, Arian Smit, Eric D. Green, Ross C. Hardison, Webb Miller. MultiPipMaker and supporting tools: alignments and analysis of multiple genomic DNA sequences |
| 3525 | -- | 3526 | Nicolas Bray, Lior Pachter. MAVID multiple alignment server |
| 3527 | -- | 3532 | Liliana Florea, Michael McClelland, Cathy Riemer, Scott Schwartz, Webb Miller. EnteriX 2003: visualization tools for genome alignments of Enterobacteriaceae |
| 3533 | -- | 3536 | Bernett T. K. Lee, Tin Wee Tan, Shoba Ranganathan. MGAlignIt: a web service for the alignment of mRNA/EST and genomic sequences |
| 3537 | -- | 3539 | Rasmus Wernersson, Anders Gorm Pedersen. RevTrans: multiple alignment of coding DNA from aligned amino acid sequences |
| 3540 | -- | 3545 | Victor V. Solovyev, Ilham A. Shahmuradov. PromH: promoters identification using orthologous genomic sequences |
| 3546 | -- | 3553 | Allen Chong, Guanglan Zhang, Vladimir B. Bajic. FIE2: a program for the extraction of genomic DNA sequences around the start and translation initiation site of human genes |
| 3554 | -- | 3559 | Anason S. Halees, Dmitriy Leyfer, Zhiping Weng. PromoSer: a large-scale mammalian promoter and transcription start site identification service |
| 3560 | -- | 3563 | Vladimir B. Bajic, Seng Hong Seah. Dragon Gene Start Finder identifies approximate locations of the 5 ends of genes |
| 3564 | -- | 3567 | Anton Nekrutenko, Wen-Yu Chung, Wen-Hsiung Li. ETOPE: evolutionary test of predicted exons |
| 3568 | -- | 3571 | Luca Cartegni, Jinhua Wang, Zhengwei Zhu, Michael Q. Zhang, Adrian R. Krainer. ESEfinder: a web resource to identify exonic splicing enhancers |
| 3572 | -- | 3575 | Paul E. Boardman, Stephen G. Oliver, Simon J. Hubbard. SiteSeer: visualisation and analysis of transcription factor binding sites in nucleotide sequences |
| 3576 | -- | 3579 | Alexander E. Kel, Ellen Gößling, Ingmar Reuter, Evgeny Cheremushkin, Olga V. Kel-Margoulis, Edgar Wingender. MATCHTM: a tool for searching transcription factor binding sites in DNA sequences |
| 3580 | -- | 3585 | William A. Thompson, Eric C. Rouchka, Charles E. Lawrence. Gibbs Recursive Sampler: finding transcription factor binding sites |
| 3586 | -- | 3588 | Saurabh Sinha, Martin Tompa. YMF: a program for discovery of novel transcription factor binding sites by statistical overrepresentation |
| 3589 | -- | 3592 | Alona Sosinsky, Christopher P. Bonin, Richard S. Mann, Barry Honig. Target Explorer: an automated tool for the identification of new target genes for a specified set of transcription factors |
| 3593 | -- | 3596 | Jacques van Helden. Regulatory Sequence Analysis Tools |
| 3597 | -- | 3600 | Shannon D. Schlueter, Qunfeng Dong, Volker Brendel. GeneSeqer add PlantGDB: gene structure prediction in plant genomes |
| 3601 | -- | 3604 | William H. Majoros, Mihaela Pertea, Corina Antonescu, Steven Salzberg. GlimmerM, Exonomy and Unveil: three ab initio eukaryotic genefinders |
| 3605 | -- | 3607 | Vladimir B. Bajic, Sin-Lam Tan, Allen Chong, Suisheng Tang, Anders Ström, Jan-Åke Gustafsson, Chin-Yo Lin, Edison T. Liu. Dragon ERE Finder version 2: a tool for accurate detection and analysis of estrogen response elements in vertebrate genomes |
| 3608 | -- | 3612 | Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Elisabetta Sbisà, Graziano Pesole. PatSearch: a program for the detection of patterns and structural motifs in nucleotide sequences |
| 3613 | -- | 3617 | Jennifer L. Gardy, Cory Spencer, Ke Wang, Martin Ester, Gábor E. Tusnády, István Simon, Sujun Hua, Katalin de Fays, Christophe G. Lambert, Kenta Nakai, Fiona S. L. Brinkman. PSORT-B: improving protein subcellular localization prediction for Gram-negative bacteria |
| 3618 | -- | 3620 | Giovanna Ambrosini, Viviane Praz, Vidhya Jagannathan, Philipp Bucher. Signal search analysis server |
| 3621 | -- | 3624 | Pingping Guan, Irini A. Doytchinova, Christianna Zygouri, Darren R. Flower. MHCPred: a server for quantitative prediction of peptide-MHC binding |
| 3625 | -- | 3630 | Pål Puntervoll, Rune Linding, Christine Gemünd, Sophie Chabanis-Davidson, Morten Mattingsdal, Scott Cameron, David M. A. Martin, Gabriele Ausiello, Barbara Brannetti, Anna Costantini, Fabrizio Ferrè, Vincenza Maselli, Allegra Via, Gianni Cesareni, Francesca Diella, Giulio Superti-Furga, Lucjan Stanislaw Wyrwicz, Chenna Ramu, Caroline McGuigan, Rambabu Gudavalli, Ivica Letunic, Peer Bork, Leszek Rychlewski, Bernhard Küster, Manuela Helmer-Citterich, William N. Hunter, Rein Aasland, Toby J. Gibson. ELM server: a new resource for investigating short functional sites in modular eukaryotic proteins |
| 3631 | -- | 3634 | Frank Eisenhaber, Birgit Eisenhaber, Werner Kubina, Sebastian Maurer-Stroh, Georg Neuberger, Georg Schneider, Michael Wildpaner. Prediction of lipid posttranslational modifications and localization signals from protein sequences: big-, NMT and PTS1 |
| 3635 | -- | 3641 | John C. Obenauer, Lewis C. Cantley, Michael B. Yaffe. Scansite 2.0: proteome-wide prediction of cell signaling interactions using short sequence motifs |
| 3642 | -- | 3644 | Andrew Kernytsky, Burkhard Rost. Static benchmarking of membrane helix predictions |
| 3645 | -- | 3650 | Tien Huynh, Isidore Rigoutsos, Laxmi Parida, Daniel E. Platt, Tetsuo Shibuya. The web server of IBM s Bioinformatics and Pattern Discovery group |
| 3651 | -- | 3653 | Domènec Farré, Roman Roset, Mario Huerta, José E. Adsuara, Llorenç Roselló, M. Mar Albà, Xavier Messeguer. Identification of patterns in biological sequences at the ALGGEN server: PROMO and MALGEN |
| 3654 | -- | 3658 | Gitanjali Yadav, Rajesh S. Gokhale, Debasisa Mohanty. SEARCHPKS: a program for detection and analysis of polyketide synthase domains |
| 3659 | -- | 3665 | Guojun Yang, Timothy C. Hall. MAK, a computational tool kit for automated MITE analysis |
| 3666 | -- | 3668 | Martin C. Frith, Michael C. Li, Zhiping Weng. Cluster-Buster: finding dense clusters of motifs in DNA sequences |
| 3669 | -- | 3671 | David Robelin, Hugues Richard, Bernard Prum. SIC: a tool to detect short inverted segments in a biological sequence |
| 3672 | -- | 3678 | Roman M. Kolpakov, Ghizlane Bana, Gregory Kucherov. mreps: efficient and flexible detection of tandem repeats in DNA |
| 3679 | -- | 3681 | Hugues Richard, Grégory Nuel. SPA: simple web tool to assess statistical significance of DNA patterns |
| 3682 | -- | 3685 | Moshe Gal, Tzvi Katz, Amir Ovadia, Gad Yagil. TRACTS: a program to map oligopurine.oligopyrimidine and other binary DNA tracts |
| 3686 | -- | 3687 | Kristian Vlahovicek, László Kaján, Sándor Pongor. DNA analysis servers: plot.it, bend.it, model.it and IS |
| 3688 | -- | 3691 | Tamas Vincze, Janos Posfai, Richard J. Roberts. NEBcutter: a program to cleave DNA with restriction enzymes |
| 3692 | -- | 3697 | C. Z. Cai, L. Y. Han, Zhi Liang Ji, X. Chen, Yu Zong Chen. SVM-Prot: web-based support vector machine software for functional classification of a protein from its primary sequence |
| 3698 | -- | 3700 | Paul D. Taylor, Terri K. Attwood, Darren R. Flower. BPROMPT: a consensus server for membrane protein prediction |
| 3701 | -- | 3708 | Rune Linding, Robert B. Russell, Victor Neduva, Toby J. Gibson. GlobPlot: exploring protein sequences for globularity and disorder |
| 3709 | -- | 3711 | Barbara Brannetti, Manuela Helmer-Citterich. iSPOT: a web tool to infer the interaction specificity of families of protein modules |
| 3712 | -- | 3715 | Steffen Hennig, Detlef Groth, Hans Lehrach. Automated Gene Ontology annotation for anonymous sequence data |
| 3716 | -- | 3719 | Agnes Hotz-Wagenblatt, Thomas Hankeln, Peter Ernst, Karl-Heinz Glatting, Erwin R. Schmidt, Sándor Suhai. ESTAnnotator: a tool for high throughput EST annotation |
| 3720 | -- | 3722 | François Enault, Karsten Suhre, Olivier Poirot, Chantal Abergel, Jean-Michel Claverie. Phydbac (phylogenomic display of bacterial genes): an interactive resource for the annotation of bacterial genomes |
| 3723 | -- | 3726 | Stéphanie Bocs, Stéphane Cruveiller, David Vallenet, Grégory Nuel, Claudine Médigue. AMIGene: Annotation of MIcrobial Genes |
| 3727 | -- | 3728 | Hideaki Sugawara, Satoru Miyazaki. AHMII: Agent to Help Microbial Information Integration |
| 3729 | -- | 3735 | Chunyu Liu, Tom I. Bonner, Tu H. Nguyen, Jennifer L. Lyons, Susan L. Christian, Elliot S. Gershon. DNannotator: annotation software tool kit for regional genomic sequences |
| 3736 | -- | 3737 | Jason McDermott, Ram Samudrala. Bioverse: functional, structural and contextual annotation of proteins and proteomes |
| 3738 | -- | 3741 | Thomas Schiex, Jérôme Gouzy, Annick Moisan, Yannick de Oliveira. FrameD: a flexible program for quality check and gene prediction in prokaryotic genomes and noisy matured eukaryotic sequences |
| 3742 | -- | 3745 | Sylvain Foissac, Philippe Bardou, Annick Moisan, Marie-Josée Cros, Thomas Schiex. EUGÈNE HOM: a generic similarity-based gene finder using multiple homologous sequences |
| 3746 | -- | 3750 | Scott J. Emrich, Mary Lowe, Arthur L. Delcher. PROBEmer: a web-based software tool for selecting optimal DNA oligos |
| 3751 | -- | 3754 | S. H. Chen, C. Y. Lin, C. S. Cho, C. Z. Lo, C. A. Hsiung. Primer Design Assistant (PDA): a web-based primer design tool |
| 3755 | -- | 3757 | Guoqing Lu, Michael T. Hallett, Stephanie Pollock, David Thomas. DePIE: Designing Primers for Protein Interaction Experiments |
| 3758 | -- | 3762 | Niels Tolstrup, Peter S. Nielsen, Jens G. Kolberg, Annett M. Frankel, Henrik Vissing, Sakari Kauppinen. OligoDesign: optimal design of LNA (locked nucleic acid) oligonucleotide capture probes for gene expression profiling |
| 3763 | -- | 3766 | Timothy Rose, Jorja G. Henikoff, Steven Henikoff. CODEHOP (COnsensus-DEgenerate Hybrid Oligonucleotide Primer) PCR primer design |
| 3767 | -- | 3770 | Alexander Sczyrba, Jan Krüger, Henning Mersch, Stefan Kurtz, Robert Giegerich. RNA-related tools on the Bielefeld Bioinformatics Server |
| 3771 | -- | 3774 | Chenna Ramu. SIRW: a web server for the Simple Indexing and Retrieval System that combines sequence motif searches with keyword searches |
| 3775 | -- | 3781 | Sorin Draghici, Purvesh Khatri, Pratik Bhavsar, Abhik Shah, Stephen A. Krawetz, Michael A. Tainsky. Onto-Tools, the toolkit of the modern biologist: Onto-Express, Onto-Compare, Onto-Design and Onto-Translate |
| 3782 | -- | 3783 | Laurent Falquet, Lorenza Bordoli, Vassilios Ioannidis, Marco Pagni, C. Victor Jongeneel. Swiss EMBnet node web server |
| 3784 | -- | 3788 | Elisabeth Gasteiger, Alexandre Gattiker, Christine Hoogland, Ivan Ivanyi, Ron D. Appel, Amos Bairoch. ExPASy: the proteomics server for in-depth protein knowledge and analysis |
| 3789 | -- | 3791 | Sven Mika, Burkhard Rost. UniqueProt: creating representative protein sequence sets |
| 3792 | -- | 3794 | Konstantinos Bimpikis, Aidan Budd, Rune Linding, Toby J. Gibson. BLAST2SRS, a web server for flexible retrieval of related protein sequences in the SWISS-PROT and SPTrEMBL databases |
| 3795 | -- | 3798 | Rodrigo Lopez, Ville Silventoinen, Stephen Robinson, Asif Kibria, Warren Gish. WU-Blast2 server at the European Bioinformatics Institute |
| 3799 | -- | 3803 | Günther Zehetner. OntoBlast function: from sequence similarities directly to potential functional annotations by ontology terms |
| 3804 | -- | 3807 | Krzysztof Ginalski, Jakub Pas, Lucjan Stanislaw Wyrwicz, Marcin von Grotthuss, Janusz M. Bujnicki, Leszek Rychlewski. ORFeus: detection of distant homology using sequence profiles and predicted secondary structure |
| 3808 | -- | 3811 | Nicholas E. Taylor, Elizabeth A. Greene. PARSESNP: a tool for the analysis of nucleotide polymorphisms |
| 3812 | -- | 3814 | Pauline C. Ng, Steven Henikoff. SIFT: predicting amino acid changes that affect protein function |
| 3815 | -- | 3818 | Guillaume Albini, Matthieu Falque, Johann Joets. ActionMap: a web-based software that automates loci assignments to framework maps |
| 3819 | -- | 3821 | Yanlin Huang, David Kowalski. WEB-THERMODYN: sequence analysis software for profiling DNA helical stability |
| 3822 | -- | 3823 | I. Q. H. Phan, Sandrine Pilbout, Wolfgang Fleischmann, Amos Bairoch. NEWT, a new taxonomy portal |
| 3824 | -- | 3828 | Michal Lapidot, Yitzhak Pilpel. Comprehensive quantitative analyses of the effects of promoter sequence elements on mRNA transcription |
| 3829 | -- | 3832 | Frédéric Plewniak, Laurent Bianchetti, Yann Brelivet, Annaick Carles, Frédéric Chalmel, Odile Lecompte, Thiebaut Mochel, Luc Moulinier, Arnaud Muller, Jean Muller, Veronique Prigent, Raymond Ripp, Jean-Claude Thierry, Julie Dawn Thompson, Nicolas Wicker, Olivier Poch. PipeAlign: a new toolkit for protein family analysis |
| 3833 | -- | 3835 | Jinfeng Liu, Burkhard Rost. NORSp: predictions of long regions without regular secondary structure |
| 3836 | -- | 3839 | Hideaki Sugawara, Satoru Miyazaki. Biological SOAP servers and web services provided by the public sequence data bank |
| 3840 | -- | 3842 | Mathieu Blanchette, Martin Tompa. FootPrinter: a program designed for phylogenetic footprinting |
| 3843 | -- | 3849 | Edouard Yeramian, Louis Jones. GeneFizz: a web tool to compare genetic (coding/non-coding) and physical (helix/coil) segmentations of DNA sequences. Gene discovery and evolutionary perspectives |
| 3850 | -- | 3855 | Niko Beerenwinkel, Martin Däumer, Mark Oette, Klaus Korn, Daniel Hoffmann, Rolf Kaiser, Thomas Lengauer, Joachim Selbig, Hauke Walter. Geno2pheno: estimating phenotypic drug resistance from HIV-1 genotypes |
| 3856 | -- | 3858 | Lucy Skrabanek, Fabien Campagne, Harel Weinstein. Building protein diagrams on the web with the residue-based diagram editor RbDe |
| 3859 | -- | 3861 | Aaron J. Mackey, Timothy A. J. Haystead, William R. Pearson. CRP: Cleavage of Radiolabeled Phosphoproteins |
| 3862 | -- | 3865 | Karsten Hiller, Max Schobert, Claudia Hundertmark, Dieter Jahn, Richard Münch. JVirGel: calculation of virtual two-dimensional protein gels |
| 3866 | -- | 3868 | Carolina Perez-Iratxeta, Antonio Jesús Pérez, Peer Bork, Miguel A. Andrade. Update on XplorMed: a web server for exploring scientific literature |